RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 CPNE1Q99829 537 aa9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 SLX1AQ9BQ83 275 aa9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 UTP23Q9BRU9 249 aaKnown RBP9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 DERL2Q9GZP9 239 aa9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 RAB17Q9H0T7 212 aa9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 CNOT10Q9H9A5 744 aaKnown RBP9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 LANCL2Q9NS86 450 aa9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 ANKRD10Q9NXR5 420 aa9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 CD274Q9NZQ7 290 aa9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 RNF112Q9ULX5 631 aa9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 CENPEQ02224 2701 aa9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 POLEQ07864 2286 aa9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 A0A088AWK7 358 aa9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 A0A0G2JN53 185 aa9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 TCRBV9S1A1TA0A576 114 aa9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 ANKDD1BA6NHY2 528 aa9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 GABRR3A8MPY1 467 aa9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 A8MUA0 341 aa9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 CXorf49A8MYA2 514 aaPredicted RBP9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 FAM227AF5H4B4 570 aa9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 SERPINA6P08185 405 aa9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 C1GALT1C1LP0DN25 315 aa9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 MAOAP21397 527 aa9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 ZNF10P21506 573 aaPredicted RBP9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 SPRP35270 261 aaPredicted RBP9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 GP5P40197 560 aa9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 SLC6A12P48065 614 aa9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 HSPA7P48741 367 aa9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 SLC26A5P58743 744 aa9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 PMP22Q01453 160 aa9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 OC90Q02509 493 aaPredicted RBP9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 CAV1Q03135 178 aa9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 SRSF11Q05519 484 aaKnown RBP9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 FBXO48Q5FWF7 155 aa9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 C1QL3Q5VWW1 255 aa9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 GFRALQ6UXV0 394 aa9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 TMIGD1Q6UXZ0 262 aa9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 SYT10Q6XYQ8 523 aa9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 QSOX2Q6ZRP7 698 aa9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 C3orf62Q6ZUJ4 267 aa9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 FJX1Q86VR8 437 aa9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 GPSM1Q86YR5 675 aa9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 PPM1NQ8N819 430 aa9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 TTLQ8NG68 377 aa9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 GAL3ST3Q96A11 431 aa9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 RHBDF1Q96CC6 855 aa9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 TAAR6Q96RI8 345 aa9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 GPR22Q99680 433 aa9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 CAPS2Q9BXY5 557 aa9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 SLC6A16Q9GZN6 736 aa9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 KLHL31Q9H511 634 aa9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 COPS7BQ9H9Q2 264 aaPredicted RBP9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 MMP25Q9NPA2 562 aa9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 KLHL1Q9NR64 748 aa9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 DNAJC11Q9NVH1 559 aa9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 GRHL1Q9NZI5 618 aa9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 SH3BGRL2Q9UJC5 107 aa9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 GTF3C1Q12789 2109 aa9.07□□□□□ -0.96
NPLOC4-212ENST00000573328 TRGV8A0A0C4DH27 118 aa9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 CTAGE15A4D2H0 777 aa9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 FAM159BA6NKW6 160 aa9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 SUPT3HB4E1H0 165 aa9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 C4orf51C9J302 202 aa9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 ERI3O43414 337 aaKnown RBP9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 CCNT2O60583 730 aaKnown RBP9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 DNAJB6O75190 326 aa9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 SUPT3HO75486 399 aa9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 UNC5CO95185 931 aa9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 CLDN1O95832 211 aa9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 GSTA2P09210 222 aa9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 CD46P15529 392 aa9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 CD1DP15813 335 aa9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 COL8A1P27658 744 aa9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 EEF1DP29692 281 aaKnown RBP9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 HPDP32754 393 aaPredicted RBP9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 STX2P32856 288 aa9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 TDGF1P3P51864 188 aa9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 RAB10P61026 200 aa9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 ATP6V0D1P61421 351 aa9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 BTN3A2P78410 334 aa9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 BTG2P78543 158 aa9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 RBPJQ06330 500 aa9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 TUBA3CQ13748 450 aa9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 OR1C1Q15619 314 aa9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 KBTBD12Q3ZCT8 623 aa9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 XKR6Q5GH73 641 aa9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 SULT1C3Q6IMI6 304 aa9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 TRIM40Q6P9F5 258 aa9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 TUBA3EQ6PEY2 450 aa9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 TBC1D1Q86TI0 1168 aaPredicted RBP9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 CTAGE6Q86UF2 777 aa9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 CA13Q8N1Q1 262 aa9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 HORMAD2Q8N7B1 307 aa9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 TMEM178AQ8NBL3 297 aa9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 FAM98AQ8NCA5 519 aaKnown RBP9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 DNAJB8Q8NHS0 232 aa9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 FBXO25Q8TCJ0 367 aa9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 ESAMQ96AP7 390 aa9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 SIGLEC12Q96PQ1 595 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms