RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 ZNF232Q9UNY5 417 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 SRPK3Q9UPE1 567 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 CLCA2Q9UQC9 943 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 EIF3LQ9Y262 564 aaKnown RBP6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 ARL2BPQ9Y2Y0 163 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 TMED5Q9Y3A6 229 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 LOXL2Q9Y4K0 774 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 POLR3HQ9Y535 204 aaPredicted RBP6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 PTGDR2Q9Y5Y4 395 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 SPACA6W5XKT8 324 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 FANCMQ8IYD8 2048 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 TP53BP1Q12888 1972 aaPredicted RBP6.27□□□□□ -1.4
CTDNEP1-204ENST00000570484 A0A0C4DFX4 3053 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 LOC105369274A0A096LPK9 316 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 LOC102723532A0A0G2JNH3 316 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 EFCAB7A8K855 629 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 H0YGG7 62 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 SAP18O00422 153 aaKnown RBP6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 SDHDO14521 159 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 UBDO15205 165 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 P2RX6O15547 441 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 PCDH7O60245 1069 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 SNX3O60493 162 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 CCDC22O60826 627 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 GUCY1B2O75343 617 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 CSO75390 466 aaKnown RBP6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 MT-CO3P00414 261 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 JUNP05412 331 aaKnown RBP6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 ZNF888P0CJ79 500 aaPredicted RBP6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 IDO1P14902 403 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 DDX5P17844 614 aaKnown RBP6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 NCF2P19878 526 aaPredicted RBP6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 TIA1P31483 386 aaKnown RBP eCLIP6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 TSFMP43897 325 aaKnown RBP6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 AVPR1BP47901 424 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 IDH3AP50213 366 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 MAPK12P53778 367 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 PLA2G16P53816 162 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 ARF3P61204 181 aaPredicted RBP6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 ERVK-8P63133 956 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 INSM1Q01101 510 aaPredicted RBP6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 CFHR1Q03591 330 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 CUL3Q13618 768 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 MUM1Q2TAK8 710 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 HKDC1Q2TB90 917 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 UGT3A2Q3SY77 523 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 SLC9B1Q4ZJI4 515 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 WASHC2DQ5SRD0 308 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 MANEAQ5SRI9 462 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 CGB2Q6NT52 195 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 TLDC1Q6P9B6 456 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 FOXR1Q6PIV2 292 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 CYP20A1Q6UW02 462 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 EPGNQ6UW88 154 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 ATG14Q6ZNE5 492 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 TMPRSS9Q7Z410 1059 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 MAVSQ7Z434 540 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 COMMD6Q7Z4G1 85 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 ARHGAP22Q7Z5H3 698 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 VN1R4Q7Z5H5 301 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 SPATA19Q7Z5L4 167 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 B3GNT8Q7Z7M8 397 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 ZFAND4Q86XD8 727 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 PPP1R3BQ86XI6 285 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 OR4N4Q8N0Y3 316 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 RNF175Q8N4F7 328 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 DNAJC22Q8N4W6 341 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 C1orf52Q8N6N3 182 aaKnown RBP6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 OR2L5Q8NG80 312 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 ACTRT2Q8TDY3 377 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 C10orf82Q8WW14 230 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 STON2Q8WXE9 905 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 KLHL6Q8WZ60 621 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 STARD8Q92502 1023 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 RGMAQ96B86 450 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 LIN37Q96GY3 246 aaPredicted RBP6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 METTL2AQ96IZ6 378 aaKnown RBP6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 OR6C1Q96RD1 312 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 ZBTB18Q99592 522 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 EBF4Q9BQW3 602 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 RTKNQ9BST9 563 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 TBCDQ9BTW9 1192 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 C1orf50Q9BV19 199 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 MRPL1Q9BYD6 325 aaKnown RBP6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 TUBB1Q9H4B7 451 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 WDR55Q9H6Y2 383 aaPredicted RBP6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 ANKHQ9HCJ1 492 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 FAM60AQ9NP50 221 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 PSD3Q9NYI0 1048 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 NDOR1Q9UHB4 597 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 PILRAQ9UKJ1 303 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 PPT2Q9UMR5 302 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 RUVBL1Q9Y265 456 aaKnown RBP6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 TMEM131Q92545 1883 aa6.27□□□□□ -1.41
CTDNEP1-204ENST00000570484 CCDC187A0A096LP49 1063 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 A0A0G2JN53 185 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 LRIT2A6NDA9 550 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 PSMD12O00232 456 aaPredicted RBP6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 LSM1O15116 133 aaKnown RBP6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 POLR1CO15160 346 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms