RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 AICDAQ9GZX7 198 aa16.06■□□□□ 0.16
MAP1LC3B-208ENST00000570189 PLA2G3Q9NZ20 509 aa16.06■□□□□ 0.16
MAP1LC3B-208ENST00000570189 TCRBV16S1A1N1A0A5B0 115 aa16.05■□□□□ 0.16
MAP1LC3B-208ENST00000570189 CCDC189A1A4V9 331 aa16.05■□□□□ 0.16
MAP1LC3B-208ENST00000570189 OR2W5A6NFC9 320 aa16.05■□□□□ 0.16
MAP1LC3B-208ENST00000570189 TAPBPO15533 448 aa16.05■□□□□ 0.16
MAP1LC3B-208ENST00000570189 PRAMEF2O60811 474 aa16.05■□□□□ 0.16
MAP1LC3B-208ENST00000570189 H2AFYO75367 372 aaKnown RBP16.05■□□□□ 0.16
MAP1LC3B-208ENST00000570189 CLEC3AO75596 197 aa16.05■□□□□ 0.16
MAP1LC3B-208ENST00000570189 CRYABP02511 175 aaKnown RBP16.05■□□□□ 0.16
MAP1LC3B-208ENST00000570189 CCDC166P0CW27 439 aa16.05■□□□□ 0.16
MAP1LC3B-208ENST00000570189 HPDP32754 393 aaPredicted RBP16.05■□□□□ 0.16
MAP1LC3B-208ENST00000570189 SPRP35270 261 aaPredicted RBP16.05■□□□□ 0.16
MAP1LC3B-208ENST00000570189 SLC26A5P58743 744 aa16.05■□□□□ 0.16
MAP1LC3B-208ENST00000570189 RAB10P61026 200 aa16.05■□□□□ 0.16
MAP1LC3B-208ENST00000570189 MRPS25P82663 173 aaKnown RBP16.05■□□□□ 0.16
MAP1LC3B-208ENST00000570189 ZNF33BQ06732 778 aa16.05■□□□□ 0.16
MAP1LC3B-208ENST00000570189 PCDH1Q08174 1060 aa16.05■□□□□ 0.16
MAP1LC3B-208ENST00000570189 TERF2Q15554 542 aa16.05■□□□□ 0.16
MAP1LC3B-208ENST00000570189 MEP1AQ16819 746 aa16.05■□□□□ 0.16
MAP1LC3B-208ENST00000570189 ZDHHC24Q6UX98 284 aa16.05■□□□□ 0.16
MAP1LC3B-208ENST00000570189 CAPN12Q6ZSI9 719 aa16.05■□□□□ 0.16
MAP1LC3B-208ENST00000570189 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.05■□□□□ 0.16
MAP1LC3B-208ENST00000570189 KRT78Q8N1N4 520 aa16.05■□□□□ 0.16
MAP1LC3B-208ENST00000570189 TSLPQ969D9 159 aa16.05■□□□□ 0.16
MAP1LC3B-208ENST00000570189 KIAA1191Q96A73 305 aa16.05■□□□□ 0.16
MAP1LC3B-208ENST00000570189 NPAS2Q99743 824 aa16.05■□□□□ 0.16
MAP1LC3B-208ENST00000570189 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.05■□□□□ 0.163e-6■■■□□ 14.9
MAP1LC3B-208ENST00000570189 CAB39LQ9H9S4 337 aa16.05■□□□□ 0.16
MAP1LC3B-208ENST00000570189 PTBP2Q9UKA9 531 aaKnown RBP16.05■□□□□ 0.16
MAP1LC3B-208ENST00000570189 SYNDIG1LA6NDD5 238 aa16.04■□□□□ 0.16
MAP1LC3B-208ENST00000570189 C4orf51C9J302 202 aa16.04■□□□□ 0.16
MAP1LC3B-208ENST00000570189 PRMT3O60678 531 aa16.04■□□□□ 0.16
MAP1LC3B-208ENST00000570189 DNAJB6O75190 326 aa16.04■□□□□ 0.16
MAP1LC3B-208ENST00000570189 CDC123O75794 336 aaPredicted RBP16.04■□□□□ 0.16
MAP1LC3B-208ENST00000570189 PIAS1O75925 651 aa16.04■□□□□ 0.16
MAP1LC3B-208ENST00000570189 SERPIND1P05546 499 aa16.04■□□□□ 0.16
MAP1LC3B-208ENST00000570189 STX2P32856 288 aa16.04■□□□□ 0.16
MAP1LC3B-208ENST00000570189 GDF5P43026 501 aa16.04■□□□□ 0.16
MAP1LC3B-208ENST00000570189 PLTPP55058 493 aa16.04■□□□□ 0.16
MAP1LC3B-208ENST00000570189 OR4D2P58180 307 aa16.04■□□□□ 0.16
MAP1LC3B-208ENST00000570189 TBCCQ15814 346 aa16.04■□□□□ 0.16
MAP1LC3B-208ENST00000570189 KBTBD12Q3ZCT8 623 aa16.04■□□□□ 0.16
MAP1LC3B-208ENST00000570189 MAMDC2Q7Z304 686 aaPredicted RBP16.04■□□□□ 0.16
MAP1LC3B-208ENST00000570189 CCDC91Q7Z6B0 441 aa16.04■□□□□ 0.16
MAP1LC3B-208ENST00000570189 GPSM1Q86YR5 675 aa16.04■□□□□ 0.16
MAP1LC3B-208ENST00000570189 MDS2Q8NDY4 140 aa16.04■□□□□ 0.16
MAP1LC3B-208ENST00000570189 SUN3Q8TAQ9 357 aa16.04■□□□□ 0.16
MAP1LC3B-208ENST00000570189 ADAMTS18Q8TE60 1221 aa16.04■□□□□ 0.16
MAP1LC3B-208ENST00000570189 MS4A6EQ96DS6 147 aa16.04■□□□□ 0.16
MAP1LC3B-208ENST00000570189 KLHL31Q9H511 634 aa16.04■□□□□ 0.16
MAP1LC3B-208ENST00000570189 KCNK13Q9HB14 408 aa16.04■□□□□ 0.16
MAP1LC3B-208ENST00000570189 PRDM9Q9NQV7 894 aa16.04■□□□□ 0.16
MAP1LC3B-208ENST00000570189 DNAJC11Q9NVH1 559 aa16.04■□□□□ 0.16
MAP1LC3B-208ENST00000570189 PPIEQ9UNP9 301 aaKnown RBP16.04■□□□□ 0.16
MAP1LC3B-208ENST00000570189 MMACHCQ9Y4U1 282 aa16.04■□□□□ 0.16
MAP1LC3B-208ENST00000570189 LRIT2A6NDA9 550 aa16.03■□□□□ 0.16
MAP1LC3B-208ENST00000570189 PHGDHO43175 533 aaKnown RBP16.03■□□□□ 0.16
MAP1LC3B-208ENST00000570189 STK16O75716 305 aa16.03■□□□□ 0.16
MAP1LC3B-208ENST00000570189 TBX6O95947 436 aaPredicted RBP16.03■□□□□ 0.16
MAP1LC3B-208ENST00000570189 B3GALT4O96024 378 aa16.03■□□□□ 0.16
MAP1LC3B-208ENST00000570189 UQCRHP07919 91 aa16.03■□□□□ 0.16
MAP1LC3B-208ENST00000570189 CASP2P42575 452 aa16.03■□□□□ 0.16
MAP1LC3B-208ENST00000570189 MAGEA4P43358 317 aa16.03■□□□□ 0.16
MAP1LC3B-208ENST00000570189 PER3P56645 1201 aa16.03■□□□□ 0.16
MAP1LC3B-208ENST00000570189 TAS2R50P59544 299 aa16.03■□□□□ 0.16
MAP1LC3B-208ENST00000570189 ACTN3Q08043 901 aaPredicted RBP16.03■□□□□ 0.16
MAP1LC3B-208ENST00000570189 TUBA3CQ13748 450 aa16.03■□□□□ 0.16
MAP1LC3B-208ENST00000570189 SLBPQ14493 270 aaKnown RBP eCLIP16.03■□□□□ 0.16
MAP1LC3B-208ENST00000570189 RBBP5Q15291 538 aaKnown RBP16.03■□□□□ 0.16
MAP1LC3B-208ENST00000570189 OR4D1Q15615 310 aa16.03■□□□□ 0.16
MAP1LC3B-208ENST00000570189 TUBA3EQ6PEY2 450 aa16.03■□□□□ 0.16
MAP1LC3B-208ENST00000570189 SYT10Q6XYQ8 523 aa16.03■□□□□ 0.16
MAP1LC3B-208ENST00000570189 CRLF3Q8IUI8 442 aa16.03■□□□□ 0.16
MAP1LC3B-208ENST00000570189 SCUBE1Q8IWY4 988 aa16.03■□□□□ 0.16
MAP1LC3B-208ENST00000570189 BEST3Q8N1M1 668 aa16.03■□□□□ 0.16
MAP1LC3B-208ENST00000570189 CA13Q8N1Q1 262 aa16.03■□□□□ 0.16
MAP1LC3B-208ENST00000570189 SLC5A8Q8N695 610 aa16.03■□□□□ 0.16
MAP1LC3B-208ENST00000570189 PTCD3Q96EY7 689 aaKnown RBP16.03■□□□□ 0.16
MAP1LC3B-208ENST00000570189 SCMH1Q96GD3 660 aa16.03■□□□□ 0.16
MAP1LC3B-208ENST00000570189 PTCHD1Q96NR3 888 aa16.03■□□□□ 0.16
MAP1LC3B-208ENST00000570189 EFCAB11Q9BUY7 163 aa16.03■□□□□ 0.16
MAP1LC3B-208ENST00000570189 RBCK1Q9BYM8 510 aa16.03■□□□□ 0.16
MAP1LC3B-208ENST00000570189 RHBGQ9H310 441 aa16.03■□□□□ 0.16
MAP1LC3B-208ENST00000570189 TRIM45Q9H8W5 580 aaPredicted RBP16.03■□□□□ 0.16
MAP1LC3B-208ENST00000570189 A0A088AWK7 358 aa16.02■□□□□ 0.16
MAP1LC3B-208ENST00000570189 A0A1B0GUH1 482 aa16.02■□□□□ 0.16
MAP1LC3B-208ENST00000570189 SAGE2PA6NJ88 616 aa16.02■□□□□ 0.16
MAP1LC3B-208ENST00000570189 CLGNO14967 610 aa16.02■□□□□ 0.16
MAP1LC3B-208ENST00000570189 PRAMEF4O60810 478 aa16.02■□□□□ 0.16
MAP1LC3B-208ENST00000570189 RASAL1O95294 804 aa16.02■□□□□ 0.16
MAP1LC3B-208ENST00000570189 SLC35E2BP0CK96 405 aa16.02■□□□□ 0.16
MAP1LC3B-208ENST00000570189 ZNF10P21506 573 aaPredicted RBP16.02■□□□□ 0.16
MAP1LC3B-208ENST00000570189 HNRNPH1P31943 449 aaKnown RBP16.02■□□□□ 0.16
MAP1LC3B-208ENST00000570189 HSD17B7P56937 341 aa16.02■□□□□ 0.16
MAP1LC3B-208ENST00000570189 RAB8AP61006 207 aa16.02■□□□□ 0.16
MAP1LC3B-208ENST00000570189 OLR1P78380 273 aa16.02■□□□□ 0.16
MAP1LC3B-208ENST00000570189 LAPTM5Q13571 262 aa16.02■□□□□ 0.16
MAP1LC3B-208ENST00000570189 PDK4Q16654 411 aa16.02■□□□□ 0.16
MAP1LC3B-208ENST00000570189 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms