RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 LRRC73Q5JTD7 316 aa3.48□□□□□ -1.85
UBR1-211ENST00000569971 BEND6Q5SZJ8 279 aaPredicted RBP3.48□□□□□ -1.85
UBR1-211ENST00000569971 NDUFAF5Q5TEU4 345 aa3.48□□□□□ -1.85
UBR1-211ENST00000569971 FKBP1CQ5VVH2 108 aa3.48□□□□□ -1.85
UBR1-211ENST00000569971 ALKBH5Q6P6C2 394 aaKnown RBP3.48□□□□□ -1.85
UBR1-211ENST00000569971 FAM171BQ6P995 826 aa3.48□□□□□ -1.85
UBR1-211ENST00000569971 ENPP7Q6UWV6 458 aa3.48□□□□□ -1.85
UBR1-211ENST00000569971 ZNF517Q6ZMY9 492 aaPredicted RBP3.48□□□□□ -1.85
UBR1-211ENST00000569971 SFR1Q86XK3 245 aa3.48□□□□□ -1.85
UBR1-211ENST00000569971 CATSPER3Q86XQ3 398 aa3.48□□□□□ -1.85
UBR1-211ENST00000569971 ZC3H3Q8IXZ2 948 aaKnown RBP3.48□□□□□ -1.85
UBR1-211ENST00000569971 CRYBG2Q8N1P7 616 aa3.48□□□□□ -1.85
UBR1-211ENST00000569971 PELI3Q8N2H9 469 aa3.48□□□□□ -1.85
UBR1-211ENST00000569971 MMGT1Q8N4V1 131 aa3.48□□□□□ -1.85
UBR1-211ENST00000569971 CPSF7Q8N684 471 aaKnown RBP3.48□□□□□ -1.85
UBR1-211ENST00000569971 RBMXL3Q8N7X1 1067 aaKnown RBP3.48□□□□□ -1.85
UBR1-211ENST00000569971 L3MBTL4Q8NA19 623 aa3.48□□□□□ -1.85
UBR1-211ENST00000569971 NOA1Q8NC60 698 aaKnown RBP3.48□□□□□ -1.85
UBR1-211ENST00000569971 DBF4BQ8NFT6 615 aa3.48□□□□□ -1.85
UBR1-211ENST00000569971 RDM1Q8NG50 284 aa3.48□□□□□ -1.85
UBR1-211ENST00000569971 VANGL1Q8TAA9 524 aaPredicted RBP3.48□□□□□ -1.85
UBR1-211ENST00000569971 GOLGA5Q8TBA6 731 aa3.48□□□□□ -1.85
UBR1-211ENST00000569971 SCFD1Q8WVM8 642 aa3.48□□□□□ -1.85
UBR1-211ENST00000569971 FAM151AQ8WW52 585 aa3.48□□□□□ -1.85
UBR1-211ENST00000569971 CRYGNQ8WXF5 182 aa3.48□□□□□ -1.85
UBR1-211ENST00000569971 CAPZA3Q96KX2 299 aa3.48□□□□□ -1.85
UBR1-211ENST00000569971 HNRNPABQ99729 332 aaKnown RBP3.48□□□□□ -1.85
UBR1-211ENST00000569971 UBXN6Q9BZV1 441 aa3.48□□□□□ -1.85
UBR1-211ENST00000569971 VPS33BQ9H267 617 aa3.48□□□□□ -1.85
UBR1-211ENST00000569971 UBTD1Q9HAC8 227 aa3.48□□□□□ -1.85
UBR1-211ENST00000569971 OLFML3Q9NRN5 406 aa3.48□□□□□ -1.85
UBR1-211ENST00000569971 AIPL1Q9NZN9 384 aa3.48□□□□□ -1.85
UBR1-211ENST00000569971 VPS18Q9P253 973 aa3.48□□□□□ -1.85
UBR1-211ENST00000569971 LEF1Q9UJU2 399 aaPredicted RBP3.48□□□□□ -1.85
UBR1-211ENST00000569971 TRAF3IP3Q9Y228 551 aa3.48□□□□□ -1.85
UBR1-211ENST00000569971 PCDHGA1Q9Y5H4 931 aa3.48□□□□□ -1.85
UBR1-211ENST00000569971 RGPD3A6NKT7 1758 aaPredicted RBP3.48□□□□□ -1.85
UBR1-211ENST00000569971 RGPD4Q7Z3J3 1758 aa3.48□□□□□ -1.85
UBR1-211ENST00000569971 ATP8B3O60423 1300 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 SIPA1L1O43166 1804 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 BAZ2BQ9UIF8 2168 aaKnown RBP3.47□□□□□ -1.85
UBR1-211ENST00000569971 A0A1W2PPK0 400 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 A0A1W2PPW3 197 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 SMIM30A4D0T7 59 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 GTPBP10A4D1E9 387 aaKnown RBP3.47□□□□□ -1.85
UBR1-211ENST00000569971 CLEC18AA5D8T8 446 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 ARHGEF35A5YM69 484 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 BTNL10A8MVZ5 291 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 PRR32B1ATL7 298 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 TCP10L2B9ZVM9 353 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 SLC33A1O00400 549 aaPredicted RBP3.47□□□□□ -1.85
UBR1-211ENST00000569971 EPHB6O15197 1021 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 MSH4O15457 936 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 KERAO60938 352 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 NME6O75414 186 aaPredicted RBP3.47□□□□□ -1.85
UBR1-211ENST00000569971 FLOT1O75955 427 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 NR3C1P04150 777 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 H1F0P07305 194 aaKnown RBP3.47□□□□□ -1.85
UBR1-211ENST00000569971 ASNSP08243 561 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 PLEKP08567 350 aaPredicted RBP3.47□□□□□ -1.85
UBR1-211ENST00000569971 SNRNP70P08621 437 aaKnown RBP3.47□□□□□ -1.85
UBR1-211ENST00000569971 SAGP10523 405 aaPredicted RBP3.47□□□□□ -1.85
UBR1-211ENST00000569971 HLA-DOBP13765 273 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 CSF2RAP15509 400 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 FERP16591 822 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 CKMT2P17540 419 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 PTGER4P35408 488 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 RGS19P49795 217 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 PRELPP51888 382 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 MTCP1P56278 107 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 SNAP25P60880 206 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 VSNL1P62760 191 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 TNNC1P63316 161 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 DLK1P80370 383 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 MAT1AQ00266 395 aaKnown RBP3.47□□□□□ -1.85
UBR1-211ENST00000569971 GFPT1Q06210 699 aaPredicted RBP3.47□□□□□ -1.85
UBR1-211ENST00000569971 DMPKQ09013 629 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 CETN1Q12798 172 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 CUL3Q13618 768 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 FHL1Q13642 323 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 CASP8Q14790 479 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 SF3B4Q15427 424 aaKnown RBP eCLIP3.47□□□□□ -1.853e-6■■■■□ 24.2
UBR1-211ENST00000569971 EXOC3L4Q17RC7 722 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 CTU2Q2VPK5 515 aaKnown RBP3.47□□□□□ -1.85
UBR1-211ENST00000569971 PHLDA2Q53GA4 152 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 AWAT2Q6E213 333 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 KRTAP5-11Q6L8G4 156 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 C8orf74Q6P047 294 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 ZNF549Q6P9A3 640 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 TMEM270Q6UE05 265 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 NHLRC1Q6VVB1 395 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 LEKR1Q6ZMV7 388 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 PLEKHM3Q6ZWE6 761 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 NRARPQ7Z6K4 114 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 IFT20Q8IY31 132 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 CFAP206Q8IYR0 622 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 SYCE1Q8N0S2 351 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 THAP8Q8NA92 274 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 CLEC18CQ8NCF0 446 aa3.47□□□□□ -1.85
UBR1-211ENST00000569971 OR7G3Q8NG95 312 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms