RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 UBAP2Q5T6F2 1119 aaKnown RBP19.11■□□□□ 0.65
CLK3-225ENST00000569063 B3GNTL1Q67FW5 361 aaPredicted RBP19.11■□□□□ 0.65
CLK3-225ENST00000569063 CENPLQ8N0S6 344 aaPredicted RBP19.11■□□□□ 0.65
CLK3-225ENST00000569063 SIRT6Q8N6T7 355 aa19.11■□□□□ 0.65
CLK3-225ENST00000569063 SNX31Q8N9S9 440 aa19.11■□□□□ 0.65
CLK3-225ENST00000569063 KIF18AQ8NI77 898 aa19.11■□□□□ 0.65
CLK3-225ENST00000569063 RHEBL1Q8TAI7 183 aa19.11■□□□□ 0.65
CLK3-225ENST00000569063 IFT81Q8WYA0 676 aa19.11■□□□□ 0.65
CLK3-225ENST00000569063 HAS2Q92819 552 aa19.11■□□□□ 0.65
CLK3-225ENST00000569063 NXNL1Q96CM4 212 aa19.11■□□□□ 0.65
CLK3-225ENST00000569063 MRRFQ96E11 262 aaKnown RBP19.11■□□□□ 0.65
CLK3-225ENST00000569063 FMO2Q99518 471 aa19.11■□□□□ 0.65
CLK3-225ENST00000569063 RBCK1Q9BYM8 510 aa19.11■□□□□ 0.65
CLK3-225ENST00000569063 SLC29A3Q9BZD2 475 aa19.11■□□□□ 0.65
CLK3-225ENST00000569063 CDC42EP4Q9H3Q1 356 aaKnown RBP19.11■□□□□ 0.65
CLK3-225ENST00000569063 ASF1BQ9NVP2 202 aa19.11■□□□□ 0.65
CLK3-225ENST00000569063 MAP10Q9P2G4 905 aa19.11■□□□□ 0.65
CLK3-225ENST00000569063 ZNF490Q9ULM2 529 aaPredicted RBP19.11■□□□□ 0.65
CLK3-225ENST00000569063 COPG1Q9Y678 874 aaKnown RBP19.11■□□□□ 0.65
CLK3-225ENST00000569063 C4orf51C9J302 202 aa19.1■□□□□ 0.65
CLK3-225ENST00000569063 CCNT2O60583 730 aaKnown RBP19.1■□□□□ 0.65
CLK3-225ENST00000569063 CLEC3AO75596 197 aa19.1■□□□□ 0.65
CLK3-225ENST00000569063 EPORP19235 508 aa19.1■□□□□ 0.65
CLK3-225ENST00000569063 TSFMP43897 325 aaKnown RBP19.1■□□□□ 0.65
CLK3-225ENST00000569063 DOC2AQ14183 400 aa19.1■□□□□ 0.65
CLK3-225ENST00000569063 E2F2Q14209 437 aa19.1■□□□□ 0.65
CLK3-225ENST00000569063 TBCCQ15814 346 aa19.1■□□□□ 0.65
CLK3-225ENST00000569063 FAM83EQ2M2I3 478 aa19.1■□□□□ 0.65
CLK3-225ENST00000569063 XKR6Q5GH73 641 aa19.1■□□□□ 0.65
CLK3-225ENST00000569063 LRRC70Q7Z2Q7 622 aa19.1■□□□□ 0.65
CLK3-225ENST00000569063 FAM26EQ8N5C1 309 aa19.1■□□□□ 0.65
CLK3-225ENST00000569063 AMER2Q8N7J2 671 aa19.1■□□□□ 0.65
CLK3-225ENST00000569063 UBTD2Q8WUN7 234 aa19.1■□□□□ 0.65
CLK3-225ENST00000569063 EXT2Q93063 718 aa19.1■□□□□ 0.65
CLK3-225ENST00000569063 GAL3ST3Q96A11 431 aa19.1■□□□□ 0.65
CLK3-225ENST00000569063 MS4A6EQ96DS6 147 aa19.1■□□□□ 0.65
CLK3-225ENST00000569063 CNDP1Q96KN2 507 aa19.1■□□□□ 0.65
CLK3-225ENST00000569063 EFCAB11Q9BUY7 163 aa19.1■□□□□ 0.65
CLK3-225ENST00000569063 SNX15Q9NRS6 342 aa19.1■□□□□ 0.65
CLK3-225ENST00000569063 ASB1Q9Y576 335 aa19.1■□□□□ 0.65
CLK3-225ENST00000569063 SHANK1Q9Y566 2161 aa19.09■□□□□ 0.65
CLK3-225ENST00000569063 DYTNA2CJ06 578 aa19.09■□□□□ 0.65
CLK3-225ENST00000569063 ANKDD1BA6NHY2 528 aa19.09■□□□□ 0.65
CLK3-225ENST00000569063 SYCE1LA8MT33 242 aa19.09■□□□□ 0.65
CLK3-225ENST00000569063 UBXN8O00124 270 aa19.09■□□□□ 0.65
CLK3-225ENST00000569063 MTHFD2P13995 350 aa19.09■□□□□ 0.65
CLK3-225ENST00000569063 HNRNPH1P31943 449 aaKnown RBP19.09■□□□□ 0.65
CLK3-225ENST00000569063 HPDP32754 393 aaPredicted RBP19.09■□□□□ 0.65
CLK3-225ENST00000569063 CASP2P42575 452 aa19.09■□□□□ 0.65
CLK3-225ENST00000569063 ARG2P78540 354 aa19.09■□□□□ 0.65
CLK3-225ENST00000569063 PCDH1Q08174 1060 aa19.09■□□□□ 0.65
CLK3-225ENST00000569063 LAPTM5Q13571 262 aa19.09■□□□□ 0.65
CLK3-225ENST00000569063 ACAP2Q15057 778 aa19.09■□□□□ 0.65
CLK3-225ENST00000569063 UAP1Q16222 522 aaPredicted RBP19.09■□□□□ 0.65
CLK3-225ENST00000569063 EXT1Q16394 746 aa19.09■□□□□ 0.65
CLK3-225ENST00000569063 BTBD16Q32M84 506 aa19.09■□□□□ 0.65
CLK3-225ENST00000569063 ADPRMQ3LIE5 342 aa19.09■□□□□ 0.65
CLK3-225ENST00000569063 SFT2D3Q587I9 215 aa19.09■□□□□ 0.65
CLK3-225ENST00000569063 H3F3CQ6NXT2 135 aa19.09■□□□□ 0.65
CLK3-225ENST00000569063 QSOX2Q6ZRP7 698 aa19.09■□□□□ 0.65
CLK3-225ENST00000569063 VN1R5Q7Z5H4 357 aa19.09■□□□□ 0.65
CLK3-225ENST00000569063 CATSPER1Q8NEC5 780 aa19.09■□□□□ 0.65
CLK3-225ENST00000569063 M1APQ8TC57 530 aa19.09■□□□□ 0.65
CLK3-225ENST00000569063 KCTD4Q8WVF5 259 aa19.09■□□□□ 0.65
CLK3-225ENST00000569063 RHBGQ9H310 441 aa19.09■□□□□ 0.65
CLK3-225ENST00000569063 A0A096LPK6 155 aa19.08■□□□□ 0.64
CLK3-225ENST00000569063 SUPT3HB4E1H0 165 aa19.08■□□□□ 0.64
CLK3-225ENST00000569063 B4GALT2O60909 372 aa19.08■□□□□ 0.64
CLK3-225ENST00000569063 SUPT3HO75486 399 aa19.08■□□□□ 0.64
CLK3-225ENST00000569063 KLHL2O95198 593 aa19.08■□□□□ 0.64
CLK3-225ENST00000569063 ACSL3O95573 720 aa19.08■□□□□ 0.64
CLK3-225ENST00000569063 TBX6O95947 436 aaPredicted RBP19.08■□□□□ 0.64
CLK3-225ENST00000569063 ALDOAP04075 364 aaKnown RBP19.08■□□□□ 0.64
CLK3-225ENST00000569063 RNH1P13489 461 aaKnown RBP19.08■□□□□ 0.64
CLK3-225ENST00000569063 CD22P20273 847 aa19.08■□□□□ 0.64
CLK3-225ENST00000569063 SERPINB8P50452 374 aa19.08■□□□□ 0.64
CLK3-225ENST00000569063 BTN3A2P78410 334 aa19.08■□□□□ 0.64
CLK3-225ENST00000569063 IRF9Q00978 393 aa19.08■□□□□ 0.64
CLK3-225ENST00000569063 ACTN3Q08043 901 aaPredicted RBP19.08■□□□□ 0.64
CLK3-225ENST00000569063 CHIT1Q13231 466 aa19.08■□□□□ 0.64
CLK3-225ENST00000569063 PAGE2BQ5JRK9 111 aa19.08■□□□□ 0.64
CLK3-225ENST00000569063 RPUSD3Q6P087 351 aaKnown RBP19.08■□□□□ 0.64
CLK3-225ENST00000569063 PAPD4Q6PIY7 484 aaKnown RBP19.08■□□□□ 0.64
CLK3-225ENST00000569063 CA13Q8N1Q1 262 aa19.08■□□□□ 0.64
CLK3-225ENST00000569063 SLC44A1Q8WWI5 657 aa19.08■□□□□ 0.64
CLK3-225ENST00000569063 CCT6BQ92526 530 aa19.08■□□□□ 0.64
CLK3-225ENST00000569063 TSLPQ969D9 159 aa19.08■□□□□ 0.64
CLK3-225ENST00000569063 FAR2Q96K12 515 aa19.08■□□□□ 0.64
CLK3-225ENST00000569063 LPAR4Q99677 370 aa19.08■□□□□ 0.64
CLK3-225ENST00000569063 NPLQ9BXD5 320 aaPredicted RBP19.08■□□□□ 0.64
CLK3-225ENST00000569063 RNF32Q9H0A6 362 aa19.08■□□□□ 0.64
CLK3-225ENST00000569063 MMP25Q9NPA2 562 aa19.08■□□□□ 0.64
CLK3-225ENST00000569063 STMN3Q9NZ72 180 aa19.08■□□□□ 0.64
CLK3-225ENST00000569063 TEKT2Q9UIF3 430 aa19.08■□□□□ 0.64
CLK3-225ENST00000569063 NTNG1Q9Y2I2 539 aa19.08■□□□□ 0.64
CLK3-225ENST00000569063 K7EPI3 171 aa19.07■□□□□ 0.64
CLK3-225ENST00000569063 PSMD12O00232 456 aaPredicted RBP19.07■□□□□ 0.64
CLK3-225ENST00000569063 ERI3O43414 337 aaKnown RBP19.07■□□□□ 0.64
CLK3-225ENST00000569063 PRMT3O60678 531 aa19.07■□□□□ 0.64
CLK3-225ENST00000569063 CBX6O95503 412 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms