RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 CLCN2P51788 898 aa14.72□□□□□ -0.05
HERPUD1-215ENST00000568676 ART1P52961 327 aa14.72□□□□□ -0.05
HERPUD1-215ENST00000568676 AP1S2P56377 157 aa14.72□□□□□ -0.05
HERPUD1-215ENST00000568676 TFF3Q07654 80 aa14.72□□□□□ -0.05
HERPUD1-215ENST00000568676 CMPK2Q5EBM0 449 aa14.72□□□□□ -0.05
HERPUD1-215ENST00000568676 DUPD1Q68J44 220 aa14.72□□□□□ -0.05
HERPUD1-215ENST00000568676 RGS9BPQ6ZS82 235 aa14.72□□□□□ -0.05
HERPUD1-215ENST00000568676 CEP128Q6ZU80 1094 aa14.72□□□□□ -0.05
HERPUD1-215ENST00000568676 GPALPP1Q8IXQ4 340 aa14.72□□□□□ -0.05
HERPUD1-215ENST00000568676 CLYBLQ8N0X4 340 aa14.72□□□□□ -0.05
HERPUD1-215ENST00000568676 CYP4Z2PQ8N1L4 340 aa14.72□□□□□ -0.05
HERPUD1-215ENST00000568676 TMEM156Q8N614 296 aa14.72□□□□□ -0.05
HERPUD1-215ENST00000568676 MCUQ8NE86 351 aa14.72□□□□□ -0.05
HERPUD1-215ENST00000568676 NFAM1Q8NET5 270 aaPredicted RBP14.72□□□□□ -0.05
HERPUD1-215ENST00000568676 MYRIPQ8NFW9 859 aa14.72□□□□□ -0.05
HERPUD1-215ENST00000568676 ATL1Q8WXF7 558 aa14.72□□□□□ -0.05
HERPUD1-215ENST00000568676 POM121Q96HA1 1249 aa14.72□□□□□ -0.05
HERPUD1-215ENST00000568676 FAM167BQ9BTA0 163 aa14.72□□□□□ -0.05
HERPUD1-215ENST00000568676 TRIM54Q9BYV2 358 aa14.72□□□□□ -0.05
HERPUD1-215ENST00000568676 ATG10Q9H0Y0 220 aa14.72□□□□□ -0.05
HERPUD1-215ENST00000568676 TIMMDC1Q9NPL8 285 aa14.72□□□□□ -0.05
HERPUD1-215ENST00000568676 C20orf96Q9NUD7 363 aaPredicted RBP14.72□□□□□ -0.05
HERPUD1-215ENST00000568676 TAS2R13Q9NYV9 303 aa14.72□□□□□ -0.05
HERPUD1-215ENST00000568676 SH2B3Q9UQQ2 575 aa14.72□□□□□ -0.05
HERPUD1-215ENST00000568676 NF1P21359 2839 aa14.72□□□□□ -0.05
HERPUD1-215ENST00000568676 MTORP42345 2549 aa14.71□□□□□ -0.05
HERPUD1-215ENST00000568676 ZNHIT1O43257 154 aa14.71□□□□□ -0.05
HERPUD1-215ENST00000568676 HS6ST1O60243 411 aa14.71□□□□□ -0.05
HERPUD1-215ENST00000568676 CDC40O60508 579 aaKnown RBP eCLIP14.71□□□□□ -0.05
HERPUD1-215ENST00000568676 TOXO94900 526 aa14.71□□□□□ -0.05
HERPUD1-215ENST00000568676 TUBB4AP04350 444 aa14.71□□□□□ -0.05
HERPUD1-215ENST00000568676 RNH1P13489 461 aaKnown RBP14.71□□□□□ -0.05
HERPUD1-215ENST00000568676 KCNJ1P48048 391 aa14.71□□□□□ -0.05
HERPUD1-215ENST00000568676 DHX9Q08211 1270 aaKnown RBP14.71□□□□□ -0.05
HERPUD1-215ENST00000568676 GPS1Q13098 491 aa14.71□□□□□ -0.05
HERPUD1-215ENST00000568676 MARVELD2Q8N4S9 558 aa14.71□□□□□ -0.05
HERPUD1-215ENST00000568676 APCDD1LQ8NCL9 501 aa14.71□□□□□ -0.05
HERPUD1-215ENST00000568676 CHDHQ8NE62 594 aaPredicted RBP14.71□□□□□ -0.05
HERPUD1-215ENST00000568676 TRPV3Q8NET8 790 aa14.71□□□□□ -0.05
HERPUD1-215ENST00000568676 B3GNT7Q8NFL0 401 aa14.71□□□□□ -0.05
HERPUD1-215ENST00000568676 OR56A3Q8NH54 315 aa14.71□□□□□ -0.05
HERPUD1-215ENST00000568676 EEF1AKMT1Q8WVE0 214 aa14.71□□□□□ -0.05
HERPUD1-215ENST00000568676 NINJ1Q92982 152 aa14.71□□□□□ -0.05
HERPUD1-215ENST00000568676 ALKBH8Q96BT7 664 aaKnown RBP14.71□□□□□ -0.05
HERPUD1-215ENST00000568676 SNF8Q96H20 258 aa14.71□□□□□ -0.05
HERPUD1-215ENST00000568676 NPDC1Q9NQX5 325 aaPredicted RBP14.71□□□□□ -0.05
HERPUD1-215ENST00000568676 ADAMTS6Q9UKP5 1117 aa14.71□□□□□ -0.05
HERPUD1-215ENST00000568676 PPIEQ9UNP9 301 aaKnown RBP14.71□□□□□ -0.05
HERPUD1-215ENST00000568676 MMACHCQ9Y4U1 282 aa14.71□□□□□ -0.05
HERPUD1-215ENST00000568676 MAD1L1Q9Y6D9 718 aa14.71□□□□□ -0.05
HERPUD1-215ENST00000568676 ACOT7O00154 380 aa14.7□□□□□ -0.06
HERPUD1-215ENST00000568676 HAUS5O94927 633 aa14.7□□□□□ -0.06
HERPUD1-215ENST00000568676 ZNF888P0CJ79 500 aaPredicted RBP14.7□□□□□ -0.06
HERPUD1-215ENST00000568676 TMEM200AQ86VY9 491 aa14.7□□□□□ -0.06
HERPUD1-215ENST00000568676 UTP15Q8TED0 518 aaKnown RBP14.7□□□□□ -0.06
HERPUD1-215ENST00000568676 ARL15Q9NXU5 204 aa14.7□□□□□ -0.06
HERPUD1-215ENST00000568676 YARS2Q9Y2Z4 477 aaKnown RBP14.7□□□□□ -0.06
HERPUD1-215ENST00000568676 SCN3AQ9NY46 2000 aa14.7□□□□□ -0.06
HERPUD1-215ENST00000568676 OR14I1A6ND48 311 aa14.69□□□□□ -0.06
HERPUD1-215ENST00000568676 FAM90A27PA6NNH2 459 aa14.69□□□□□ -0.06
HERPUD1-215ENST00000568676 ITGA10O75578 1167 aa14.69□□□□□ -0.06
HERPUD1-215ENST00000568676 SERPIND1P05546 499 aa14.69□□□□□ -0.06
HERPUD1-215ENST00000568676 ENO2P09104 434 aaPredicted RBP14.69□□□□□ -0.06
HERPUD1-215ENST00000568676 CD99P14209 185 aa14.69□□□□□ -0.06
HERPUD1-215ENST00000568676 SCTRP47872 440 aa14.69□□□□□ -0.06
HERPUD1-215ENST00000568676 SSR4P51571 173 aa14.69□□□□□ -0.06
HERPUD1-215ENST00000568676 OLR1P78380 273 aa14.69□□□□□ -0.06
HERPUD1-215ENST00000568676 BTG2P78543 158 aa14.69□□□□□ -0.06
HERPUD1-215ENST00000568676 FOLH1Q04609 750 aa14.69□□□□□ -0.06
HERPUD1-215ENST00000568676 CSHL1Q14406 222 aa14.69□□□□□ -0.06
HERPUD1-215ENST00000568676 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.69□□□□□ -0.06
HERPUD1-215ENST00000568676 CREB3L4Q8TEY5 395 aa14.69□□□□□ -0.06
HERPUD1-215ENST00000568676 VMP1Q96GC9 406 aa14.69□□□□□ -0.06
HERPUD1-215ENST00000568676 SERPINB12Q96P63 405 aa14.69□□□□□ -0.06
HERPUD1-215ENST00000568676 FOXC2Q99958 501 aa14.69□□□□□ -0.06
HERPUD1-215ENST00000568676 CCDC77Q9BR77 488 aa14.69□□□□□ -0.06
HERPUD1-215ENST00000568676 TMUB1Q9BVT8 246 aa14.69□□□□□ -0.06
HERPUD1-215ENST00000568676 SLC6A16Q9GZN6 736 aa14.69□□□□□ -0.06
HERPUD1-215ENST00000568676 CXXC4Q9H2H0 198 aa14.69□□□□□ -0.06
HERPUD1-215ENST00000568676 EDARQ9UNE0 448 aa14.69□□□□□ -0.06
HERPUD1-215ENST00000568676 HRH3Q9Y5N1 445 aa14.69□□□□□ -0.06
HERPUD1-215ENST00000568676 TRBV11-1A0A0K0K1C0 115 aa14.68□□□□□ -0.06
HERPUD1-215ENST00000568676 NKX2-6A6NCS4 301 aa14.68□□□□□ -0.06
HERPUD1-215ENST00000568676 FIGNL2A6NMB9 653 aa14.68□□□□□ -0.06
HERPUD1-215ENST00000568676 BCKDKO14874 412 aa14.68□□□□□ -0.06
HERPUD1-215ENST00000568676 KLK8O60259 260 aa14.68□□□□□ -0.06
HERPUD1-215ENST00000568676 ZWINTO95229 277 aa14.68□□□□□ -0.06
HERPUD1-215ENST00000568676 KRT14P02533 472 aa14.68□□□□□ -0.06
HERPUD1-215ENST00000568676 MAOAP21397 527 aa14.68□□□□□ -0.06
HERPUD1-215ENST00000568676 DNAJA1P31689 397 aaKnown RBP14.68□□□□□ -0.06
HERPUD1-215ENST00000568676 PEX19P40855 299 aa14.68□□□□□ -0.06
HERPUD1-215ENST00000568676 MAGEA3P43357 314 aa14.68□□□□□ -0.06
HERPUD1-215ENST00000568676 IL2P60568 153 aa14.68□□□□□ -0.06
HERPUD1-215ENST00000568676 MYBPHQ13203 477 aa14.68□□□□□ -0.06
HERPUD1-215ENST00000568676 PHKG1Q16816 387 aa14.68□□□□□ -0.06
HERPUD1-215ENST00000568676 HSP90AA5PQ58FG0 334 aa14.68□□□□□ -0.06
HERPUD1-215ENST00000568676 MBOAT1Q6ZNC8 495 aa14.68□□□□□ -0.06
HERPUD1-215ENST00000568676 C2CD4AQ8NCU7 369 aaPredicted RBP14.68□□□□□ -0.06
HERPUD1-215ENST00000568676 PSD4Q8NDX1 1056 aa14.68□□□□□ -0.06
HERPUD1-215ENST00000568676 SLC5A11Q8WWX8 675 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms