RNA–Protein interactions for RNA: ENST00000568548.5

VAC14-210, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,945 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-210ENST00000568548 IFITM2Q01629 132 aa16.45■□□□□ 0.22
VAC14-210ENST00000568548 RPS26P11Q5JNZ5 115 aaPredicted RBP16.45■□□□□ 0.22
VAC14-210ENST00000568548 RNF130Q86XS8 419 aa16.45■□□□□ 0.22
VAC14-210ENST00000568548 HJURPQ8NCD3 748 aaPredicted RBP16.45■□□□□ 0.22
VAC14-210ENST00000568548 ZNF740Q8NDX6 193 aa16.45■□□□□ 0.22
VAC14-210ENST00000568548 IGSF21Q96ID5 467 aa16.45■□□□□ 0.22
VAC14-210ENST00000568548 ADPRHL2Q9NX46 363 aa16.45■□□□□ 0.22
VAC14-210ENST00000568548 PDZK1P1A8MUH7 402 aa16.45■□□□□ 0.22
VAC14-210ENST00000568548 GABRR2P28476 465 aa16.45■□□□□ 0.22
VAC14-210ENST00000568548 CASP3P42574 277 aa16.45■□□□□ 0.22
VAC14-210ENST00000568548 ITGA1P56199 1179 aa16.45■□□□□ 0.22
VAC14-210ENST00000568548 ELP6Q0PNE2 266 aa16.45■□□□□ 0.22
VAC14-210ENST00000568548 SPANXN2Q5MJ10 180 aa16.45■□□□□ 0.22
VAC14-210ENST00000568548 OR2AP1Q8NGE2 309 aa16.45■□□□□ 0.22
VAC14-210ENST00000568548 HRASLS5Q96KN8 279 aa16.45■□□□□ 0.22
VAC14-210ENST00000568548 CCNB1IP1Q9NPC3 277 aa16.45■□□□□ 0.22
VAC14-210ENST00000568548 SAGE1Q9NXZ1 904 aa16.45■□□□□ 0.22
VAC14-210ENST00000568548 TMED5Q9Y3A6 229 aa16.45■□□□□ 0.22
VAC14-210ENST00000568548 PRAMEF33A0A0G2JMD5 474 aa16.44■□□□□ 0.22
VAC14-210ENST00000568548 CLCA1A8K7I4 914 aa16.44■□□□□ 0.22
VAC14-210ENST00000568548 TSPAN6O43657 245 aa16.44■□□□□ 0.22
VAC14-210ENST00000568548 PRAMEF10O60809 474 aa16.44■□□□□ 0.22
VAC14-210ENST00000568548 RPLP0P05388 317 aaKnown RBP16.44■□□□□ 0.22
VAC14-210ENST00000568548 FHP07954 510 aa16.44■□□□□ 0.22
VAC14-210ENST00000568548 C1SP09871 688 aa16.44■□□□□ 0.22
VAC14-210ENST00000568548 ATP1B2P14415 290 aaPredicted RBP16.44■□□□□ 0.22
VAC14-210ENST00000568548 RAE1P78406 368 aaKnown RBP16.44■□□□□ 0.22
VAC14-210ENST00000568548 STARD3Q14849 445 aa16.44■□□□□ 0.22
VAC14-210ENST00000568548 FAHD1Q6P587 224 aa16.44■□□□□ 0.22
VAC14-210ENST00000568548 PAQR6Q6TCH4 344 aa16.44■□□□□ 0.22
VAC14-210ENST00000568548 DCAF4L2Q8NA75 395 aa16.44■□□□□ 0.22
VAC14-210ENST00000568548 ZNF461Q8TAF7 563 aa16.44■□□□□ 0.22
VAC14-210ENST00000568548 TIGARQ9NQ88 270 aa16.44■□□□□ 0.22
VAC14-210ENST00000568548 PCDHGB3Q9Y5G1 929 aa16.44■□□□□ 0.22
VAC14-210ENST00000568548 MED26O95402 600 aa16.44■□□□□ 0.22
VAC14-210ENST00000568548 IGSF6O95976 241 aa16.44■□□□□ 0.22
VAC14-210ENST00000568548 SRCP12931 536 aa16.44■□□□□ 0.22
VAC14-210ENST00000568548 SLC6A12P48065 614 aa16.44■□□□□ 0.22
VAC14-210ENST00000568548 RGS6P49758 472 aa16.44■□□□□ 0.22
VAC14-210ENST00000568548 BCL7AQ4VC05 210 aa16.44■□□□□ 0.22
VAC14-210ENST00000568548 SZRD1Q7Z422 152 aa16.44■□□□□ 0.22
VAC14-210ENST00000568548 HSD11B1LQ7Z5J1 315 aa16.44■□□□□ 0.22
VAC14-210ENST00000568548 OR52E4Q8NGH9 312 aa16.44■□□□□ 0.22
VAC14-210ENST00000568548 WDR36Q8NI36 951 aaKnown RBP16.44■□□□□ 0.22
VAC14-210ENST00000568548 DOHHQ9BU89 302 aa16.44■□□□□ 0.22
VAC14-210ENST00000568548 SUV39H2Q9H5I1 410 aa16.44■□□□□ 0.22
VAC14-210ENST00000568548 RDH14Q9HBH5 336 aa16.44■□□□□ 0.22
VAC14-210ENST00000568548 DNAJC27Q9NZQ0 273 aa16.44■□□□□ 0.22
VAC14-210ENST00000568548 IFT52Q9Y366 437 aa16.44■□□□□ 0.22
VAC14-210ENST00000568548 PCDHGB6Q9Y5F9 930 aa16.44■□□□□ 0.22
VAC14-210ENST00000568548 DNAJB5O75953 348 aa16.43■□□□□ 0.22
VAC14-210ENST00000568548 KRT75O95678 551 aa16.43■□□□□ 0.22
VAC14-210ENST00000568548 EFEMP2O95967 443 aa16.43■□□□□ 0.22
VAC14-210ENST00000568548 MAPK1P28482 360 aa16.43■□□□□ 0.22
VAC14-210ENST00000568548 HLA-FP30511 346 aa16.43■□□□□ 0.22
VAC14-210ENST00000568548 PRSS53Q2L4Q9 553 aa16.43■□□□□ 0.22
VAC14-210ENST00000568548 AGTRAPQ6RW13 159 aa16.43■□□□□ 0.22
VAC14-210ENST00000568548 TPRG1Q6ZUI0 275 aa16.43■□□□□ 0.22
VAC14-210ENST00000568548 SYNPOQ8N3V7 929 aa16.43■□□□□ 0.22
VAC14-210ENST00000568548 WDR48Q8TAF3 677 aa16.43■□□□□ 0.22
VAC14-210ENST00000568548 CYB5D2Q8WUJ1 264 aa16.43■□□□□ 0.22
VAC14-210ENST00000568548 UBTD2Q8WUN7 234 aa16.43■□□□□ 0.22
VAC14-210ENST00000568548 NEIL2Q969S2 332 aa16.43■□□□□ 0.22
VAC14-210ENST00000568548 ZNF486Q96H40 463 aaPredicted RBP16.43■□□□□ 0.22
VAC14-210ENST00000568548 TTYH2Q9BSA4 534 aa16.43■□□□□ 0.22
VAC14-210ENST00000568548 MMP27Q9H306 513 aa16.43■□□□□ 0.22
VAC14-210ENST00000568548 CCL26Q9Y258 94 aa16.43■□□□□ 0.22
VAC14-210ENST00000568548 ITM2BQ9Y287 266 aa16.43■□□□□ 0.22
VAC14-210ENST00000568548 IDH3BO43837 385 aa16.43■□□□□ 0.22
VAC14-210ENST00000568548 CDK1P06493 297 aa16.43■□□□□ 0.22
VAC14-210ENST00000568548 JUPP14923 745 aa16.43■□□□□ 0.22
VAC14-210ENST00000568548 LSM11P83369 360 aaKnown RBP eCLIP16.43■□□□□ 0.22
VAC14-210ENST00000568548 CSGALNACT1Q8TDX6 532 aa16.43■□□□□ 0.22
VAC14-210ENST00000568548 SCRN2Q96FV2 425 aa16.43■□□□□ 0.22
VAC14-210ENST00000568548 ZFYVE19Q96K21 471 aa16.43■□□□□ 0.22
VAC14-210ENST00000568548 CDK5RAP1Q96SZ6 601 aaKnown RBP16.43■□□□□ 0.22
VAC14-210ENST00000568548 FAM129BQ96TA1 746 aa16.43■□□□□ 0.22
VAC14-210ENST00000568548 SLC35A5Q9BS91 424 aa16.43■□□□□ 0.22
VAC14-210ENST00000568548 HOXD1Q9GZZ0 328 aa16.43■□□□□ 0.22
VAC14-210ENST00000568548 SPATA7Q9P0W8 599 aa16.43■□□□□ 0.22
VAC14-210ENST00000568548 EXO1Q9UQ84 846 aaKnown RBP16.43■□□□□ 0.22
VAC14-210ENST00000568548 PRKAB1Q9Y478 270 aa16.43■□□□□ 0.22
VAC14-210ENST00000568548 UGT2A1Q9Y4X1 527 aa16.43■□□□□ 0.22
VAC14-210ENST00000568548 PCDHGA3Q9Y5H0 932 aa16.43■□□□□ 0.22
VAC14-210ENST00000568548 BACE2Q9Y5Z0 518 aa16.43■□□□□ 0.22
VAC14-210ENST00000568548 CFAP20Q9Y6A4 193 aaKnown RBP16.43■□□□□ 0.22
VAC14-210ENST00000568548 A0A1W2PRU2 124 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 KMOO15229 486 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 NUAK1O60285 661 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 STATHP02808 62 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 CYP2A7P20853 494 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 GGT2P36268 569 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 CXCR4P61073 352 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 SRSF11Q05519 484 aaKnown RBP16.42■□□□□ 0.22
VAC14-210ENST00000568548 IRF3Q14653 427 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 PTGES3Q15185 160 aaKnown RBP16.42■□□□□ 0.22
VAC14-210ENST00000568548 DUSP7Q16829 419 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 GPR33Q49SQ1 333 aa16.42■□□□□ 0.22
VAC14-210ENST00000568548 TNFAIP8L2Q6P589 184 aaPredicted RBP16.42■□□□□ 0.22
VAC14-210ENST00000568548 TMC5Q6UXY8 1006 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms