RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 P3H2Q8IVL5 708 aa16.11■□□□□ 0.17
CMTM3-213ENST00000566756 ETFBKMTQ8IXQ9 262 aa16.11■□□□□ 0.17
CMTM3-213ENST00000566756 FBXO15Q8NCQ5 510 aaPredicted RBP16.11■□□□□ 0.17
CMTM3-213ENST00000566756 OR2A12Q8NGT7 310 aa16.11■□□□□ 0.17
CMTM3-213ENST00000566756 MYDGFQ969H8 173 aa16.11■□□□□ 0.17
CMTM3-213ENST00000566756 MTERF1Q99551 399 aaKnown RBP16.11■□□□□ 0.17
CMTM3-213ENST00000566756 DPH2Q9BQC3 489 aaPredicted RBP16.11■□□□□ 0.17
CMTM3-213ENST00000566756 PSORS1C1Q9UIG5 152 aa16.11■□□□□ 0.17
CMTM3-213ENST00000566756 KIAA1549LQ6ZVL6 1849 aa16.1■□□□□ 0.17
CMTM3-213ENST00000566756 KRBA1A5PL33 1030 aa16.1■□□□□ 0.17
CMTM3-213ENST00000566756 TTC34A8MYJ7 566 aa16.1■□□□□ 0.17
CMTM3-213ENST00000566756 TMEM229AB2RXF0 380 aa16.1■□□□□ 0.17
CMTM3-213ENST00000566756 BMP4P12644 408 aa16.1■□□□□ 0.17
CMTM3-213ENST00000566756 CD36P16671 472 aa16.1■□□□□ 0.17
CMTM3-213ENST00000566756 TGM1P22735 817 aa16.1■□□□□ 0.17
CMTM3-213ENST00000566756 EPHA2P29317 976 aa16.1■□□□□ 0.17
CMTM3-213ENST00000566756 TIA1P31483 386 aaKnown RBP eCLIP16.1■□□□□ 0.173e-6■■■□□ 18.3
CMTM3-213ENST00000566756 RPL3P39023 403 aaKnown RBP16.1■□□□□ 0.17
CMTM3-213ENST00000566756 RECQLP46063 649 aaPredicted RBP16.1■□□□□ 0.17
CMTM3-213ENST00000566756 SMN1Q16637 294 aaKnown RBP16.1■□□□□ 0.17
CMTM3-213ENST00000566756 ANKRD54Q6NXT1 300 aa16.1■□□□□ 0.17
CMTM3-213ENST00000566756 CCDC80Q76M96 950 aa16.1■□□□□ 0.17
CMTM3-213ENST00000566756 BTLAQ7Z6A9 289 aa16.1■□□□□ 0.17
CMTM3-213ENST00000566756 RNF175Q8N4F7 328 aa16.1■□□□□ 0.17
CMTM3-213ENST00000566756 C1orf52Q8N6N3 182 aaKnown RBP16.1■□□□□ 0.17
CMTM3-213ENST00000566756 TMEM159Q96B96 161 aa16.1■□□□□ 0.17
CMTM3-213ENST00000566756 TPD52L3Q96J77 140 aa16.1■□□□□ 0.17
CMTM3-213ENST00000566756 THSD1Q9NS62 852 aa16.1■□□□□ 0.17
CMTM3-213ENST00000566756 TRNAU1APQ9NX07 287 aaKnown RBP16.1■□□□□ 0.17
CMTM3-213ENST00000566756 DOLKQ9UPQ8 538 aa16.1■□□□□ 0.17
CMTM3-213ENST00000566756 LYVE1Q9Y5Y7 322 aa16.1■□□□□ 0.17
CMTM3-213ENST00000566756 SLC5A10A0PJK1 596 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 MGAT4DA6NG13 374 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 HEPACAM2A8MVW5 462 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 MAN1A2O60476 641 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 RRM2P31350 389 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 FCHO2Q0JRZ9 810 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 NAE1Q13564 534 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 PDGFRLQ15198 375 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 FBXO43Q4G163 708 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 PAGE2BQ5JRK9 111 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 AGAP7PQ5VUJ5 663 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 SYCE2Q6PIF2 218 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 Q6ZVU0 165 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 GALNT10Q86SR1 603 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 OR7G3Q8NG95 312 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 RHOXF1Q8NHV9 184 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 WDR34Q96EX3 536 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 LRIG1Q96JA1 1093 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 OR4K3Q96R72 315 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 HEPHQ9BQS7 1158 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 MMP27Q9H306 513 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 IGFLR1Q9H665 355 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 RUBCNLQ9H714 662 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 CD84Q9UIB8 345 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 RNF6Q9Y252 685 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 POFUT2Q9Y2G5 429 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 ISPDA4D126 451 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 EFCAB9A8MZ26 197 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 FOXE1O00358 373 aaPredicted RBP16.09■□□□□ 0.17
CMTM3-213ENST00000566756 BNIP3LO60238 219 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 ATG13O75143 517 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 ITGA2P17301 1181 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 FCARP24071 287 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 PRLHRP49683 370 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 PPP5CP53041 499 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 NCS1P62166 190 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 HYAL1Q12794 435 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 SYTL3Q4VX76 610 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 AHSA2Q719I0 299 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 GET4Q7L5D6 327 aaPredicted RBP16.09■□□□□ 0.17
CMTM3-213ENST00000566756 HSD11B1LQ7Z5J1 315 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 PLD3Q8IV08 490 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 RAVER1Q8IY67 606 aaKnown RBP16.09■□□□□ 0.17
CMTM3-213ENST00000566756 DEPDC4Q8N2C3 294 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 CHST14Q8NCH0 376 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 DENND6BQ8NEG7 585 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 HCAR2Q8TDS4 363 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 BTN2A2Q8WVV5 523 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 DNASE1L2Q92874 299 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 ZHX1-C8orf76Q96EF9 292 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 COPS4Q9BT78 406 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 TMEM38AQ9H6F2 299 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 NDUFAF4Q9P032 175 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 KCNE2Q9Y6J6 123 aa16.09■□□□□ 0.17
CMTM3-213ENST00000566756 TMEM221A6NGB7 291 aa16.08■□□□□ 0.16
CMTM3-213ENST00000566756 TAF4O00268 1085 aa16.08■□□□□ 0.16
CMTM3-213ENST00000566756 RFXAPO00287 272 aa16.08■□□□□ 0.16
CMTM3-213ENST00000566756 TNFRSF11BO00300 401 aa16.08■□□□□ 0.16
CMTM3-213ENST00000566756 TOR1BO14657 336 aa16.08■□□□□ 0.16
CMTM3-213ENST00000566756 TNFRSF21O75509 655 aa16.08■□□□□ 0.16
CMTM3-213ENST00000566756 GCM2O75603 506 aaPredicted RBP16.08■□□□□ 0.16
CMTM3-213ENST00000566756 IMPA1P29218 277 aa16.08■□□□□ 0.16
CMTM3-213ENST00000566756 GAB1Q13480 694 aa16.08■□□□□ 0.16
CMTM3-213ENST00000566756 DGCR6Q14129 220 aa16.08■□□□□ 0.16
CMTM3-213ENST00000566756 GAB4Q2WGN9 574 aa16.08■□□□□ 0.16
CMTM3-213ENST00000566756 IFI44LQ53G44 452 aa16.08■□□□□ 0.16
CMTM3-213ENST00000566756 TCEAL5Q5H9L2 206 aa16.08■□□□□ 0.16
CMTM3-213ENST00000566756 MED27Q6P2C8 311 aa16.08■□□□□ 0.16
CMTM3-213ENST00000566756 TSEN54Q7Z6J9 526 aaKnown RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms