RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 TMC5Q6UXY8 1006 aa20.74■□□□□ 0.91
SPSB3-208ENST00000566339 Q6ZNB5 142 aa20.74■□□□□ 0.91
SPSB3-208ENST00000566339 GALNT10Q86SR1 603 aa20.74■□□□□ 0.91
SPSB3-208ENST00000566339 CYP4Z2PQ8N1L4 340 aa20.74■□□□□ 0.91
SPSB3-208ENST00000566339 SLC43A3Q8NBI5 491 aa20.74■□□□□ 0.91
SPSB3-208ENST00000566339 OR2AP1Q8NGE2 309 aa20.74■□□□□ 0.91
SPSB3-208ENST00000566339 OR6F1Q8NGZ6 308 aa20.74■□□□□ 0.91
SPSB3-208ENST00000566339 CAPSLQ8WWF8 208 aa20.74■□□□□ 0.91
SPSB3-208ENST00000566339 ASIC4Q96FT7 647 aa20.74■□□□□ 0.91
SPSB3-208ENST00000566339 Q96MT0 163 aa20.74■□□□□ 0.91
SPSB3-208ENST00000566339 PIP5K1AQ99755 562 aa20.74■□□□□ 0.91
SPSB3-208ENST00000566339 RNF38Q9H0F5 515 aa20.74■□□□□ 0.91
SPSB3-208ENST00000566339 TP63Q9H3D4 680 aaPredicted RBP20.74■□□□□ 0.91
SPSB3-208ENST00000566339 NDOR1Q9UHB4 597 aa20.74■□□□□ 0.91
SPSB3-208ENST00000566339 BTBD3Q9Y2F9 522 aa20.74■□□□□ 0.91
SPSB3-208ENST00000566339 CACNB4O00305 520 aaPredicted RBP20.74■□□□□ 0.91
SPSB3-208ENST00000566339 GALTP07902 379 aa20.74■□□□□ 0.91
SPSB3-208ENST00000566339 ATP1B2P14415 290 aaPredicted RBP20.74■□□□□ 0.91
SPSB3-208ENST00000566339 CBLP22681 906 aa20.74■□□□□ 0.91
SPSB3-208ENST00000566339 XCR1P46094 333 aa20.74■□□□□ 0.91
SPSB3-208ENST00000566339 SNRPD1P62314 119 aaKnown RBP20.74■□□□□ 0.91
SPSB3-208ENST00000566339 CLPPQ16740 277 aaPredicted RBP20.74■□□□□ 0.91
SPSB3-208ENST00000566339 TRIM40Q6P9F5 258 aa20.74■□□□□ 0.91
SPSB3-208ENST00000566339 B3GNT7Q8NFL0 401 aa20.74■□□□□ 0.91
SPSB3-208ENST00000566339 LILRB4Q8NHJ6 448 aa20.74■□□□□ 0.91
SPSB3-208ENST00000566339 C17orf50Q8WW18 174 aa20.74■□□□□ 0.91
SPSB3-208ENST00000566339 REPS1Q96D71 796 aa20.74■□□□□ 0.91
SPSB3-208ENST00000566339 SDHCQ99643 169 aaPredicted RBP20.74■□□□□ 0.91
SPSB3-208ENST00000566339 P2RY13Q9BPV8 354 aa20.74■□□□□ 0.91
SPSB3-208ENST00000566339 FZD3Q9NPG1 666 aa20.74■□□□□ 0.91
SPSB3-208ENST00000566339 PAK6Q9NQU5 681 aaPredicted RBP20.74■□□□□ 0.91
SPSB3-208ENST00000566339 QPCTLQ9NXS2 382 aa20.74■□□□□ 0.91
SPSB3-208ENST00000566339 SEC14L4Q9UDX3 406 aa20.74■□□□□ 0.91
SPSB3-208ENST00000566339 NPIPB15A6NHN6 443 aaPredicted RBP20.73■□□□□ 0.91
SPSB3-208ENST00000566339 YY2O15391 372 aa20.73■□□□□ 0.91
SPSB3-208ENST00000566339 CCNB2O95067 398 aa20.73■□□□□ 0.91
SPSB3-208ENST00000566339 KRT75O95678 551 aa20.73■□□□□ 0.91
SPSB3-208ENST00000566339 SCG5P05408 212 aa20.73■□□□□ 0.91
SPSB3-208ENST00000566339 HLA-EP13747 358 aa20.73■□□□□ 0.91
SPSB3-208ENST00000566339 TIA1P31483 386 aaKnown RBP eCLIP20.73■□□□□ 0.91
SPSB3-208ENST00000566339 SNRPGP62308 76 aaKnown RBP20.73■□□□□ 0.91
SPSB3-208ENST00000566339 HSPA14Q0VDF9 509 aa20.73■□□□□ 0.91
SPSB3-208ENST00000566339 EXOC3L2Q2M3D2 409 aa20.73■□□□□ 0.91
SPSB3-208ENST00000566339 ATP13A5Q4VNC0 1218 aa20.73■□□□□ 0.91
SPSB3-208ENST00000566339 XKR6Q5GH73 641 aa20.73■□□□□ 0.91
SPSB3-208ENST00000566339 TMEM201Q5SNT2 666 aa20.73■□□□□ 0.91
SPSB3-208ENST00000566339 TPGS2Q68CL5 300 aa20.73■□□□□ 0.91
SPSB3-208ENST00000566339 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.73■□□□□ 0.91
SPSB3-208ENST00000566339 RNF180Q86T96 592 aa20.73■□□□□ 0.91
SPSB3-208ENST00000566339 THOC6Q86W42 341 aaKnown RBP20.73■□□□□ 0.91
SPSB3-208ENST00000566339 SLC22A15Q8IZD6 547 aa20.73■□□□□ 0.91
SPSB3-208ENST00000566339 SLC7A5P1Q8MH63 180 aa20.73■□□□□ 0.91
SPSB3-208ENST00000566339 NAGSQ8N159 534 aa20.73■□□□□ 0.91
SPSB3-208ENST00000566339 SIMC1Q8NDZ2 872 aa20.73■□□□□ 0.91
SPSB3-208ENST00000566339 RASSF5Q8WWW0 418 aa20.73■□□□□ 0.91
SPSB3-208ENST00000566339 WBP2Q969T9 261 aa20.73■□□□□ 0.91
SPSB3-208ENST00000566339 CPEB1Q9BZB8 566 aaKnown RBP20.73■□□□□ 0.91
SPSB3-208ENST00000566339 SMURF1Q9HCE7 757 aa20.73■□□□□ 0.91
SPSB3-208ENST00000566339 HMX1Q9NP08 348 aaPredicted RBP20.73■□□□□ 0.91
SPSB3-208ENST00000566339 MS4A12Q9NXJ0 267 aa20.73■□□□□ 0.91
SPSB3-208ENST00000566339 FTSJ1Q9UET6 329 aa20.73■□□□□ 0.91
SPSB3-208ENST00000566339 PLXNB3Q9ULL4 1909 aa20.72■□□□□ 0.91
SPSB3-208ENST00000566339 MGAT4DA6NG13 374 aa20.72■□□□□ 0.91
SPSB3-208ENST00000566339 EFEMP2O95967 443 aa20.72■□□□□ 0.91
SPSB3-208ENST00000566339 ANXA4P09525 319 aaPredicted RBP20.72■□□□□ 0.91
SPSB3-208ENST00000566339 NUDT7P0C024 238 aa20.72■□□□□ 0.91
SPSB3-208ENST00000566339 RHCEP18577 417 aa20.72■□□□□ 0.91
SPSB3-208ENST00000566339 MVDP53602 400 aa20.72■□□□□ 0.91
SPSB3-208ENST00000566339 RAE1P78406 368 aaKnown RBP20.72■□□□□ 0.91
SPSB3-208ENST00000566339 GPR50Q13585 617 aa20.72■□□□□ 0.91
SPSB3-208ENST00000566339 CPXM2Q8N436 756 aa20.72■□□□□ 0.91
SPSB3-208ENST00000566339 FAM46DQ8NEK8 389 aa20.72■□□□□ 0.91
SPSB3-208ENST00000566339 OR4A15Q8NGL6 344 aa20.72■□□□□ 0.91
SPSB3-208ENST00000566339 ASZ1Q8WWH4 475 aa20.72■□□□□ 0.91
SPSB3-208ENST00000566339 TP53INP1Q96A56 240 aa20.72■□□□□ 0.91
SPSB3-208ENST00000566339 TIFAQ96CG3 184 aa20.72■□□□□ 0.91
SPSB3-208ENST00000566339 MTERF3Q96E29 417 aa20.72■□□□□ 0.91
SPSB3-208ENST00000566339 SYNDIG1Q9H7V2 258 aa20.72■□□□□ 0.91
SPSB3-208ENST00000566339 TRPV5Q9NQA5 729 aa20.72■□□□□ 0.91
SPSB3-208ENST00000566339 CFAP20Q9Y6A4 193 aaKnown RBP20.72■□□□□ 0.91
SPSB3-208ENST00000566339 ENPP4Q9Y6X5 453 aa20.72■□□□□ 0.91
SPSB3-208ENST00000566339 K7ERQ8 282 aa20.72■□□□□ 0.91
SPSB3-208ENST00000566339 PSIP1O75475 530 aaKnown RBP20.72■□□□□ 0.91
SPSB3-208ENST00000566339 SLCO2B1O94956 709 aa20.72■□□□□ 0.91
SPSB3-208ENST00000566339 CD22P20273 847 aa20.72■□□□□ 0.91
SPSB3-208ENST00000566339 ITPKAP23677 461 aa20.72■□□□□ 0.91
SPSB3-208ENST00000566339 CDH12P55289 794 aa20.72■□□□□ 0.91
SPSB3-208ENST00000566339 SMAD3P84022 425 aaKnown RBP20.72■□□□□ 0.91
SPSB3-208ENST00000566339 GAB1Q13480 694 aa20.72■□□□□ 0.91
SPSB3-208ENST00000566339 SCARB2Q14108 478 aa20.72■□□□□ 0.91
SPSB3-208ENST00000566339 DOC2AQ14183 400 aa20.72■□□□□ 0.91
SPSB3-208ENST00000566339 VEPH1Q14D04 833 aa20.72■□□□□ 0.91
SPSB3-208ENST00000566339 NCF4Q15080 339 aa20.72■□□□□ 0.91
SPSB3-208ENST00000566339 UNC5DQ6UXZ4 953 aa20.72■□□□□ 0.91
SPSB3-208ENST00000566339 Q6ZPB1 254 aaPredicted RBP20.72■□□□□ 0.91
SPSB3-208ENST00000566339 FAM181AQ8N9Y4 354 aa20.72■□□□□ 0.91
SPSB3-208ENST00000566339 TTC16Q8NEE8 873 aa20.72■□□□□ 0.91
SPSB3-208ENST00000566339 UTP15Q8TED0 518 aaKnown RBP20.72■□□□□ 0.91
SPSB3-208ENST00000566339 OR2A14Q96R47 310 aa20.72■□□□□ 0.91
SPSB3-208ENST00000566339 REEP4Q9H6H4 257 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 197.6 ms