RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 PEPDP12955 493 aa13.17□□□□□ -0.3
CX3CL1-204ENST00000565912 GKP32189 559 aa13.17□□□□□ -0.3
CX3CL1-204ENST00000565912 GSK3BP49841 420 aa13.17□□□□□ -0.3
CX3CL1-204ENST00000565912 MS4A13Q5J8X5 152 aa13.17□□□□□ -0.3
CX3CL1-204ENST00000565912 CTU1Q7Z7A3 348 aaKnown RBP13.17□□□□□ -0.3
CX3CL1-204ENST00000565912 ZC3HC1Q86WB0 502 aaKnown RBP13.17□□□□□ -0.3
CX3CL1-204ENST00000565912 RNF130Q86XS8 419 aa13.17□□□□□ -0.3
CX3CL1-204ENST00000565912 SUN5Q8TC36 379 aa13.17□□□□□ -0.3
CX3CL1-204ENST00000565912 MMABQ96EY8 250 aaPredicted RBP13.17□□□□□ -0.3
CX3CL1-204ENST00000565912 PTTG2Q9NZH5 202 aa13.17□□□□□ -0.3
CX3CL1-204ENST00000565912 GSKIPQ9P0R6 139 aa13.17□□□□□ -0.3
CX3CL1-204ENST00000565912 WDR45Q9Y484 360 aa13.17□□□□□ -0.3
CX3CL1-204ENST00000565912 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 HLA-DPB1P04440 258 aa13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 RAB12Q6IQ22 244 aa13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 CMASQ8NFW8 434 aaPredicted RBP13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 HRASLS2Q9NWW9 162 aa13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 SLC7A8Q9UHI5 535 aa13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 NALCNQ8IZF0 1738 aa13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 H0YJX3 145 aa13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 SYNGR4O95473 234 aa13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 ADH1BP00325 375 aa13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 BCKDHAP12694 445 aa13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 ADAM15Q13444 863 aa13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 RPS27LQ71UM5 84 aaKnown RBP13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 PPP1R14BQ96C90 147 aa13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 TMEM74Q96NL1 305 aa13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 FNIP2Q9P278 1114 aa13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 MATN2O00339 956 aa13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 SCNN1AP37088 669 aa13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 ENTPD1P49961 510 aa13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 PLP2Q04941 152 aa13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 ZNF630Q2M218 657 aaPredicted RBP13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 SGIP1Q9BQI5 828 aa13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 NSUN3Q9H649 340 aaKnown RBP13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 BCAS3Q9H6U6 928 aa13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 IL21RQ9HBE5 538 aa13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 MOV10Q9HCE1 1003 aaKnown RBP13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 DLGAP4Q9Y2H0 992 aa13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 RGPD8O14715 1765 aaPredicted RBP13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 SMIM30A4D0T7 59 aa13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 FAM221BA6H8Z2 402 aa13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 ZNF860A6NHJ4 632 aa13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 FAM159BA6NKW6 160 aa13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 CREG1O75629 220 aa13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 CDC123O75794 336 aaPredicted RBP13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 CD83Q01151 205 aa13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 CDKL4Q5MAI5 379 aa13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 TMEM225Q6GV28 225 aa13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 ZDHHC24Q6UX98 284 aa13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 PIGWQ7Z7B1 504 aa13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 OSTM1Q86WC4 334 aa13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 ZNF283Q8N7M2 679 aa13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 GATSQ8NAP1 163 aa13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 OR8K3Q8NH51 312 aa13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 SHKBP1Q8TBC3 707 aa13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 ZNF384Q8TF68 577 aa13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 C12orf42Q96LP6 360 aa13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 KCNA7Q96RP8 456 aa13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 MEAF6Q9HAF1 191 aa13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 FAM120CQ9NX05 1096 aaKnown RBP13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 B4GALT6Q9UBX8 382 aa13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 TMEM5Q9Y2B1 443 aa13.16□□□□□ -0.3
CX3CL1-204ENST00000565912 SMCO3A2RU48 225 aa13.15□□□□□ -0.3
CX3CL1-204ENST00000565912 HAPLN1P10915 354 aaPredicted RBP13.15□□□□□ -0.3
CX3CL1-204ENST00000565912 MLLT10P55197 1068 aa13.15□□□□□ -0.3
CX3CL1-204ENST00000565912 WDR4P57081 412 aaKnown RBP13.15□□□□□ -0.3
CX3CL1-204ENST00000565912 MLLT1Q03111 559 aaPredicted RBP13.15□□□□□ -0.3
CX3CL1-204ENST00000565912 SPANXN4Q5MJ08 99 aa13.15□□□□□ -0.3
CX3CL1-204ENST00000565912 RAB8BQ92930 207 aa13.15□□□□□ -0.3
CX3CL1-204ENST00000565912 ZNF285Q96NJ3 590 aa13.15□□□□□ -0.3
CX3CL1-204ENST00000565912 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.15□□□□□ -0.3
CX3CL1-204ENST00000565912 NFKBIEO00221 500 aa13.15□□□□□ -0.3
CX3CL1-204ENST00000565912 EBLN1P0CF75 366 aa13.15□□□□□ -0.3
CX3CL1-204ENST00000565912 CDH15P55291 814 aa13.15□□□□□ -0.3
CX3CL1-204ENST00000565912 VSX2P58304 361 aaPredicted RBP13.15□□□□□ -0.3
CX3CL1-204ENST00000565912 MPP2Q14168 576 aa13.15□□□□□ -0.3
CX3CL1-204ENST00000565912 SPAG16Q8N0X2 631 aa13.15□□□□□ -0.3
CX3CL1-204ENST00000565912 DERL2Q9GZP9 239 aa13.15□□□□□ -0.3
CX3CL1-204ENST00000565912 CYP8B1Q9UNU6 501 aa13.15□□□□□ -0.3
CX3CL1-204ENST00000565912 PLCL2Q9UPR0 1127 aa13.15□□□□□ -0.3
CX3CL1-204ENST00000565912 C11orf98E9PRG8 122 aa13.15□□□□□ -0.3
CX3CL1-204ENST00000565912 CNTN5O94779 1100 aa13.15□□□□□ -0.3
CX3CL1-204ENST00000565912 GALTP07902 379 aa13.15□□□□□ -0.3
CX3CL1-204ENST00000565912 PRKACGP22612 351 aa13.15□□□□□ -0.3
CX3CL1-204ENST00000565912 PTPRCAPQ14761 206 aa13.15□□□□□ -0.3
CX3CL1-204ENST00000565912 GALNT11Q8NCW6 608 aa13.15□□□□□ -0.3
CX3CL1-204ENST00000565912 SMG8Q8ND04 991 aaKnown RBP13.15□□□□□ -0.3
CX3CL1-204ENST00000565912 XKR8Q9H6D3 395 aa13.15□□□□□ -0.3
CX3CL1-204ENST00000565912 H7BY64 318 aa13.15□□□□□ -0.3
CX3CL1-204ENST00000565912 NR0B1P51843 470 aaKnown RBP13.15□□□□□ -0.3
CX3CL1-204ENST00000565912 TMEM115Q12893 351 aaPredicted RBP13.15□□□□□ -0.3
CX3CL1-204ENST00000565912 SEC23BQ15437 767 aa13.15□□□□□ -0.3
CX3CL1-204ENST00000565912 SWT1Q5T5J6 900 aaKnown RBP13.15□□□□□ -0.3
CX3CL1-204ENST00000565912 POGLUT1Q8NBL1 392 aa13.15□□□□□ -0.3
CX3CL1-204ENST00000565912 CASTOR1Q8WTX7 329 aa13.15□□□□□ -0.3
CX3CL1-204ENST00000565912 PRAP1Q96NZ9 151 aa13.15□□□□□ -0.3
CX3CL1-204ENST00000565912 WACQ9BTA9 647 aa13.15□□□□□ -0.3
CX3CL1-204ENST00000565912 TMEM121BQ9BXQ6 578 aaPredicted RBP13.15□□□□□ -0.3
CX3CL1-204ENST00000565912 POLDIP3Q9BY77 421 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms