RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 GPRC5BQ9NZH0 403 aa18.67■□□□□ 0.58
CLN6-206ENST00000565471 GRHL1Q9NZI5 618 aa18.67■□□□□ 0.58
CLN6-206ENST00000565471 FAM159BA6NKW6 160 aa18.66■□□□□ 0.58
CLN6-206ENST00000565471 CXorf49A8MYA2 514 aaPredicted RBP18.66■□□□□ 0.58
CLN6-206ENST00000565471 PRMT3O60678 531 aa18.66■□□□□ 0.58
CLN6-206ENST00000565471 GGT5P36269 586 aa18.66■□□□□ 0.58
CLN6-206ENST00000565471 GP5P40197 560 aa18.66■□□□□ 0.58
CLN6-206ENST00000565471 HNF4AP41235 474 aa18.66■□□□□ 0.58
CLN6-206ENST00000565471 GDF5P43026 501 aa18.66■□□□□ 0.58
CLN6-206ENST00000565471 STXBP1P61764 594 aaKnown RBP18.66■□□□□ 0.58
CLN6-206ENST00000565471 TUBA3CQ13748 450 aa18.66■□□□□ 0.58
CLN6-206ENST00000565471 C18orf21Q32NC0 220 aaPredicted RBP18.66■□□□□ 0.58
CLN6-206ENST00000565471 TOR1AIP1Q5JTV8 583 aa18.66■□□□□ 0.58
CLN6-206ENST00000565471 TUBA3EQ6PEY2 450 aa18.66■□□□□ 0.58
CLN6-206ENST00000565471 TMIGD1Q6UXZ0 262 aa18.66■□□□□ 0.58
CLN6-206ENST00000565471 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.66■□□□□ 0.58
CLN6-206ENST00000565471 MDS2Q8NDY4 140 aa18.66■□□□□ 0.58
CLN6-206ENST00000565471 ELP5Q8TE02 316 aa18.66■□□□□ 0.58
CLN6-206ENST00000565471 RELTQ969Z4 430 aa18.66■□□□□ 0.58
CLN6-206ENST00000565471 PTCHD1Q96NR3 888 aa18.66■□□□□ 0.58
CLN6-206ENST00000565471 UTP23Q9BRU9 249 aaKnown RBP18.66■□□□□ 0.58
CLN6-206ENST00000565471 PITHD1Q9GZP4 211 aaPredicted RBP18.66■□□□□ 0.58
CLN6-206ENST00000565471 KLHL31Q9H511 634 aa18.66■□□□□ 0.58
CLN6-206ENST00000565471 NT5DC2Q9H857 520 aa18.66■□□□□ 0.58
CLN6-206ENST00000565471 CAB39LQ9H9S4 337 aa18.66■□□□□ 0.58
CLN6-206ENST00000565471 PRDM9Q9NQV7 894 aa18.66■□□□□ 0.58
CLN6-206ENST00000565471 IGKV3D-11A0A0A0MRZ8 115 aa18.65■□□□□ 0.58
CLN6-206ENST00000565471 PSMD12O00232 456 aaPredicted RBP18.65■□□□□ 0.58
CLN6-206ENST00000565471 CCDC166P0CW27 439 aa18.65■□□□□ 0.58
CLN6-206ENST00000565471 STMN1P16949 149 aa18.65■□□□□ 0.58
CLN6-206ENST00000565471 KCNK10P57789 538 aa18.65■□□□□ 0.58
CLN6-206ENST00000565471 ATP6V0D1P61421 351 aa18.65■□□□□ 0.58
CLN6-206ENST00000565471 C2orf54Q08AI8 447 aa18.65■□□□□ 0.58
CLN6-206ENST00000565471 SLBPQ14493 270 aaKnown RBP eCLIP18.65■□□□□ 0.58
CLN6-206ENST00000565471 ZKSCAN8Q15776 578 aaPredicted RBP18.65■□□□□ 0.58
CLN6-206ENST00000565471 GFRALQ6UXV0 394 aa18.65■□□□□ 0.58
CLN6-206ENST00000565471 C3orf62Q6ZUJ4 267 aa18.65■□□□□ 0.58
CLN6-206ENST00000565471 KRT78Q8N1N4 520 aa18.65■□□□□ 0.58
CLN6-206ENST00000565471 GAL3ST3Q96A11 431 aa18.65■□□□□ 0.58
CLN6-206ENST00000565471 TMEM79Q9BSE2 394 aa18.65■□□□□ 0.58
CLN6-206ENST00000565471 AICDAQ9GZX7 198 aa18.65■□□□□ 0.58
CLN6-206ENST00000565471 EHD1Q9H4M9 534 aa18.65■□□□□ 0.58
CLN6-206ENST00000565471 CNOT10Q9H9A5 744 aaKnown RBP18.65■□□□□ 0.58
CLN6-206ENST00000565471 UNC79Q9P2D8 2635 aa18.64■□□□□ 0.57
CLN6-206ENST00000565471 TCRBV16S1A1N1A0A5B0 115 aa18.64■□□□□ 0.57
CLN6-206ENST00000565471 NCF1BA6NI72 391 aaPredicted RBP18.64■□□□□ 0.57
CLN6-206ENST00000565471 NCF1CA8MVU1 366 aaPredicted RBP18.64■□□□□ 0.57
CLN6-206ENST00000565471 C4orf51C9J302 202 aa18.64■□□□□ 0.57
CLN6-206ENST00000565471 PHGDHO43175 533 aaKnown RBP18.64■□□□□ 0.57
CLN6-206ENST00000565471 C1QAP02745 245 aa18.64■□□□□ 0.57
CLN6-206ENST00000565471 NCF1P14598 390 aaPredicted RBP18.64■□□□□ 0.57
CLN6-206ENST00000565471 CD1DP15813 335 aa18.64■□□□□ 0.57
CLN6-206ENST00000565471 MST1P26927 711 aa18.64■□□□□ 0.57
CLN6-206ENST00000565471 CD96P40200 585 aa18.64■□□□□ 0.57
CLN6-206ENST00000565471 BTG2P78543 158 aa18.64■□□□□ 0.57
CLN6-206ENST00000565471 CAV1Q03135 178 aa18.64■□□□□ 0.57
CLN6-206ENST00000565471 OR1C1Q15619 314 aa18.64■□□□□ 0.57
CLN6-206ENST00000565471 ZRSR2Q15696 482 aaKnown RBP18.64■□□□□ 0.57
CLN6-206ENST00000565471 SULT1C3Q6IMI6 304 aa18.64■□□□□ 0.57
CLN6-206ENST00000565471 GPSM1Q86YR5 675 aa18.64■□□□□ 0.57
CLN6-206ENST00000565471 CA13Q8N1Q1 262 aa18.64■□□□□ 0.57
CLN6-206ENST00000565471 SCMH1Q96GD3 660 aa18.64■□□□□ 0.57
CLN6-206ENST00000565471 UBXN10Q96LJ8 280 aa18.64■□□□□ 0.57
CLN6-206ENST00000565471 SIGLEC12Q96PQ1 595 aa18.64■□□□□ 0.57
CLN6-206ENST00000565471 NPLQ9BXD5 320 aaPredicted RBP18.64■□□□□ 0.57
CLN6-206ENST00000565471 UNKQ9C0B0 810 aaKnown RBP18.64■□□□□ 0.57
CLN6-206ENST00000565471 DNAJC11Q9NVH1 559 aa18.64■□□□□ 0.57
CLN6-206ENST00000565471 WWOXQ9NZC7 414 aa18.64■□□□□ 0.57
CLN6-206ENST00000565471 UTP11Q9Y3A2 253 aaKnown RBP18.64■□□□□ 0.57
CLN6-206ENST00000565471 MMACHCQ9Y4U1 282 aa18.64■□□□□ 0.57
CLN6-206ENST00000565471 CROCCQ5TZA2 2017 aa18.63■□□□□ 0.57
CLN6-206ENST00000565471 LRIT2A6NDA9 550 aa18.63■□□□□ 0.57
CLN6-206ENST00000565471 SAGE2PA6NJ88 616 aa18.63■□□□□ 0.57
CLN6-206ENST00000565471 GABRR3A8MPY1 467 aa18.63■□□□□ 0.57
CLN6-206ENST00000565471 TAPBPO15533 448 aa18.63■□□□□ 0.57
CLN6-206ENST00000565471 MAN1A2O60476 641 aa18.63■□□□□ 0.57
CLN6-206ENST00000565471 CLEC3AO75596 197 aa18.63■□□□□ 0.57
CLN6-206ENST00000565471 UNC5CO95185 931 aa18.63■□□□□ 0.57
CLN6-206ENST00000565471 MAOAP21397 527 aa18.63■□□□□ 0.57
CLN6-206ENST00000565471 COL8A1P27658 744 aa18.63■□□□□ 0.57
CLN6-206ENST00000565471 HPDP32754 393 aaPredicted RBP18.63■□□□□ 0.57
CLN6-206ENST00000565471 DCTP40126 519 aa18.63■□□□□ 0.57
CLN6-206ENST00000565471 GPX6P59796 221 aa18.63■□□□□ 0.57
CLN6-206ENST00000565471 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.63■□□□□ 0.57
CLN6-206ENST00000565471 FJX1Q86VR8 437 aa18.63■□□□□ 0.57
CLN6-206ENST00000565471 RPS19BP1Q86WX3 136 aaKnown RBP18.63■□□□□ 0.57
CLN6-206ENST00000565471 SPATA6LQ8N4H0 392 aa18.63■□□□□ 0.57
CLN6-206ENST00000565471 HORMAD2Q8N7B1 307 aa18.63■□□□□ 0.57
CLN6-206ENST00000565471 PDPRQ8NCN5 879 aa18.63■□□□□ 0.57
CLN6-206ENST00000565471 ARMC2Q8NEN0 867 aa18.63■□□□□ 0.57
CLN6-206ENST00000565471 MS4A6EQ96DS6 147 aa18.63■□□□□ 0.57
CLN6-206ENST00000565471 FAR2Q96K12 515 aa18.63■□□□□ 0.57
CLN6-206ENST00000565471 RAB17Q9H0T7 212 aa18.63■□□□□ 0.57
CLN6-206ENST00000565471 SEC14L3Q9UDX4 400 aa18.63■□□□□ 0.57
CLN6-206ENST00000565471 DIDO1Q9BTC0 2240 aaKnown RBP18.63■□□□□ 0.57
CLN6-206ENST00000565471 A0A088AWK7 358 aa18.62■□□□□ 0.57
CLN6-206ENST00000565471 FAM227AF5H4B4 570 aa18.62■□□□□ 0.57
CLN6-206ENST00000565471 CLGNO14967 610 aa18.62■□□□□ 0.57
CLN6-206ENST00000565471 STK16O75716 305 aa18.62■□□□□ 0.57
CLN6-206ENST00000565471 CD46P15529 392 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms