RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 PRKAR1AP10644 381 aa24.65■■□□□ 1.54
NME3-208ENST00000565379 UROSP10746 265 aa24.65■■□□□ 1.54
NME3-208ENST00000565379 BGNP21810 368 aa24.65■■□□□ 1.54
NME3-208ENST00000565379 SKP1P63208 163 aa24.65■■□□□ 1.54
NME3-208ENST00000565379 KCNC4Q03721 635 aa24.65■■□□□ 1.54
NME3-208ENST00000565379 HKDC1Q2TB90 917 aa24.65■■□□□ 1.54
NME3-208ENST00000565379 ATP1A1-AS1Q5TC04 95 aa24.65■■□□□ 1.54
NME3-208ENST00000565379 TMEM214Q6NUQ4 689 aaKnown RBP24.65■■□□□ 1.54
NME3-208ENST00000565379 CHSY3Q70JA7 882 aa24.65■■□□□ 1.54
NME3-208ENST00000565379 CDYL2Q8N8U2 506 aa24.65■■□□□ 1.54
NME3-208ENST00000565379 GALNT6Q8NCL4 622 aa24.65■■□□□ 1.54
NME3-208ENST00000565379 SRFBP1Q8NEF9 429 aaKnown RBP24.65■■□□□ 1.54
NME3-208ENST00000565379 HUS1BQ8NHY5 278 aa24.65■■□□□ 1.54
NME3-208ENST00000565379 DYDC1Q8WWB3 177 aa24.65■■□□□ 1.54
NME3-208ENST00000565379 CLIP3Q96DZ5 547 aa24.65■■□□□ 1.54
NME3-208ENST00000565379 SLC6A16Q9GZN6 736 aa24.65■■□□□ 1.54
NME3-208ENST00000565379 CLMPQ9H6B4 373 aa24.65■■□□□ 1.54
NME3-208ENST00000565379 MANSC1Q9H8J5 431 aa24.65■■□□□ 1.54
NME3-208ENST00000565379 GPN2Q9H9Y4 310 aaPredicted RBP24.65■■□□□ 1.54
NME3-208ENST00000565379 PRM3Q9NNZ6 103 aa24.65■■□□□ 1.54
NME3-208ENST00000565379 SLC22A7Q9Y694 548 aa24.65■■□□□ 1.54
NME3-208ENST00000565379 A0A1B0GTL3 188 aa24.64■■□□□ 1.54
NME3-208ENST00000565379 P2RX6O15547 441 aa24.64■■□□□ 1.54
NME3-208ENST00000565379 ULK1O75385 1050 aa24.64■■□□□ 1.54
NME3-208ENST00000565379 HSPA4LO95757 839 aa24.64■■□□□ 1.54
NME3-208ENST00000565379 CTSBP07858 339 aa24.64■■□□□ 1.54
NME3-208ENST00000565379 HSD3B1P14060 373 aa24.64■■□□□ 1.54
NME3-208ENST00000565379 HSD3B2P26439 372 aa24.64■■□□□ 1.54
NME3-208ENST00000565379 ARFIP1P53367 373 aa24.64■■□□□ 1.54
NME3-208ENST00000565379 TGM3Q08188 693 aa24.64■■□□□ 1.54
NME3-208ENST00000565379 HERC3Q15034 1050 aa24.64■■□□□ 1.54
NME3-208ENST00000565379 TMEM35AQ53FP2 167 aa24.64■■□□□ 1.54
NME3-208ENST00000565379 PRMT9Q6P2P2 845 aa24.64■■□□□ 1.54
NME3-208ENST00000565379 ABHD13Q7L211 337 aa24.64■■□□□ 1.54
NME3-208ENST00000565379 CCT6BQ92526 530 aa24.64■■□□□ 1.54
NME3-208ENST00000565379 CENPKQ9BS16 269 aa24.64■■□□□ 1.54
NME3-208ENST00000565379 FAM117AQ9C073 453 aa24.64■■□□□ 1.54
NME3-208ENST00000565379 BRF2Q9HAW0 419 aa24.64■■□□□ 1.54
NME3-208ENST00000565379 STARD5Q9NSY2 213 aa24.64■■□□□ 1.54
NME3-208ENST00000565379 THAP1Q9NVV9 213 aa24.64■■□□□ 1.54
NME3-208ENST00000565379 CDC14AQ9UNH5 594 aa24.64■■□□□ 1.54
NME3-208ENST00000565379 A0A1B0GX78 115 aa24.63■■□□□ 1.53
NME3-208ENST00000565379 DSCR3O14972 297 aa24.63■■□□□ 1.53
NME3-208ENST00000565379 CHEK2O96017 543 aa24.63■■□□□ 1.53
NME3-208ENST00000565379 KLK3P07288 261 aaPredicted RBP24.63■■□□□ 1.53
NME3-208ENST00000565379 SFTPCP11686 197 aa24.63■■□□□ 1.53
NME3-208ENST00000565379 PTX3P26022 381 aaPredicted RBP24.63■■□□□ 1.53
NME3-208ENST00000565379 SLC1A6P48664 564 aa24.63■■□□□ 1.53
NME3-208ENST00000565379 NFATC3Q12968 1075 aa24.63■■□□□ 1.53
NME3-208ENST00000565379 ADPRMQ3LIE5 342 aa24.63■■□□□ 1.53
NME3-208ENST00000565379 VN1R5Q7Z5H4 357 aa24.63■■□□□ 1.53
NME3-208ENST00000565379 CLYBLQ8N0X4 340 aa24.63■■□□□ 1.53
NME3-208ENST00000565379 ARHGEF39Q8N4T4 335 aa24.63■■□□□ 1.53
NME3-208ENST00000565379 SELENOMQ8WWX9 145 aa24.63■■□□□ 1.53
NME3-208ENST00000565379 DMRT3Q9NQL9 472 aa24.63■■□□□ 1.53
NME3-208ENST00000565379 NMRK1Q9NWW6 199 aa24.63■■□□□ 1.53
NME3-208ENST00000565379 HEMK1Q9Y5R4 338 aaPredicted RBP24.63■■□□□ 1.53
NME3-208ENST00000565379 MDC1Q14676 2089 aaKnown RBP24.63■■□□□ 1.53
NME3-208ENST00000565379 A0A088AWK7 358 aa24.62■■□□□ 1.53
NME3-208ENST00000565379 SERTM1A2A2V5 107 aa24.62■■□□□ 1.53
NME3-208ENST00000565379 LRIT2A6NDA9 550 aa24.62■■□□□ 1.53
NME3-208ENST00000565379 MANBAO00462 879 aa24.62■■□□□ 1.53
NME3-208ENST00000565379 FFAR3O14843 346 aa24.62■■□□□ 1.53
NME3-208ENST00000565379 AZIN1O14977 448 aa24.62■■□□□ 1.53
NME3-208ENST00000565379 GPR42O15529 346 aa24.62■■□□□ 1.53
NME3-208ENST00000565379 WISP1O95388 367 aa24.62■■□□□ 1.53
NME3-208ENST00000565379 PIM1P11309 404 aaPredicted RBP24.62■■□□□ 1.53
NME3-208ENST00000565379 ZNF10P21506 573 aaPredicted RBP24.62■■□□□ 1.53
NME3-208ENST00000565379 STAT5AP42229 794 aa24.62■■□□□ 1.53
NME3-208ENST00000565379 CCR10P46092 362 aa24.62■■□□□ 1.53
NME3-208ENST00000565379 BST1Q10588 318 aa24.62■■□□□ 1.53
NME3-208ENST00000565379 CUL3Q13618 768 aa24.62■■□□□ 1.53
NME3-208ENST00000565379 C6orf15Q6UXA7 325 aaPredicted RBP24.62■■□□□ 1.53
NME3-208ENST00000565379 RNF165Q6ZSG1 346 aa24.62■■□□□ 1.53
NME3-208ENST00000565379 TTLL10Q6ZVT0 673 aa24.62■■□□□ 1.53
NME3-208ENST00000565379 ESX1Q8N693 406 aa24.62■■□□□ 1.53
NME3-208ENST00000565379 GBP7Q8N8V2 638 aaPredicted RBP24.62■■□□□ 1.53
NME3-208ENST00000565379 GAL3ST3Q96A11 431 aa24.62■■□□□ 1.53
NME3-208ENST00000565379 COL26A1Q96A83 441 aa24.62■■□□□ 1.53
NME3-208ENST00000565379 SLC45A3Q96JT2 553 aa24.62■■□□□ 1.53
NME3-208ENST00000565379 C10orf90Q96M02 699 aa24.62■■□□□ 1.53
NME3-208ENST00000565379 SERPINI1Q99574 410 aa24.62■■□□□ 1.53
NME3-208ENST00000565379 C17orf62Q9BQA9 187 aa24.62■■□□□ 1.53
NME3-208ENST00000565379 MS4A8Q9BY19 250 aa24.62■■□□□ 1.53
NME3-208ENST00000565379 REXO4Q9GZR2 422 aaKnown RBP24.62■■□□□ 1.53
NME3-208ENST00000565379 ILKAPQ9H0C8 392 aaPredicted RBP24.62■■□□□ 1.53
NME3-208ENST00000565379 SPTBP11277 2137 aa24.62■■□□□ 1.53
NME3-208ENST00000565379 NTRK1P04629 796 aa24.61■■□□□ 1.53
NME3-208ENST00000565379 CHRNGP07510 517 aa24.61■■□□□ 1.53
NME3-208ENST00000565379 CCNYL3P0C7X3 344 aa24.61■■□□□ 1.53
NME3-208ENST00000565379 AGXTP21549 392 aa24.61■■□□□ 1.53
NME3-208ENST00000565379 RORAP35398 523 aa24.61■■□□□ 1.53
NME3-208ENST00000565379 AVPR1BP47901 424 aa24.61■■□□□ 1.53
NME3-208ENST00000565379 ABHD18Q0P651 414 aa24.61■■□□□ 1.53
NME3-208ENST00000565379 HYAL2Q12891 473 aa24.61■■□□□ 1.53
NME3-208ENST00000565379 CSTF3Q12996 717 aaKnown RBP24.61■■□□□ 1.53
NME3-208ENST00000565379 DDX39BQ13838 428 aaKnown RBP24.61■■□□□ 1.53
NME3-208ENST00000565379 TOR1AIP1Q5JTV8 583 aa24.61■■□□□ 1.53
NME3-208ENST00000565379 PRAMEF17Q5VTA0 474 aa24.61■■□□□ 1.53
NME3-208ENST00000565379 PRICKLE2Q7Z3G6 844 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms