RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 KCNF1Q9H3M0 494 aa11.44□□□□□ -0.58
GTF3C1-204ENST00000564664 SLC17A6Q9P2U8 582 aa11.44□□□□□ -0.58
GTF3C1-204ENST00000564664 MMACHCQ9Y4U1 282 aa11.44□□□□□ -0.58
GTF3C1-204ENST00000564664 CRYBG3Q68DQ2 2970 aa11.44□□□□□ -0.58
GTF3C1-204ENST00000564664 MYO9AB2RTY4 2548 aa11.44□□□□□ -0.58
GTF3C1-204ENST00000564664 TRGV8A0A0C4DH27 118 aa11.43□□□□□ -0.58
GTF3C1-204ENST00000564664 ENO4A6NNW6 628 aa11.43□□□□□ -0.58
GTF3C1-204ENST00000564664 GABRR3A8MPY1 467 aa11.43□□□□□ -0.58
GTF3C1-204ENST00000564664 CDC7O00311 574 aa11.43□□□□□ -0.58
GTF3C1-204ENST00000564664 CCL21O00585 134 aa11.43□□□□□ -0.58
GTF3C1-204ENST00000564664 TP73O15350 636 aa11.43□□□□□ -0.58
GTF3C1-204ENST00000564664 EIF3HO15372 352 aaKnown RBP eCLIP11.43□□□□□ -0.58
GTF3C1-204ENST00000564664 B4GALT2O60909 372 aa11.43□□□□□ -0.58
GTF3C1-204ENST00000564664 CDC123O75794 336 aaPredicted RBP11.43□□□□□ -0.58
GTF3C1-204ENST00000564664 AGAP20933 346 aa11.43□□□□□ -0.58
GTF3C1-204ENST00000564664 SAT1P21673 171 aa11.43□□□□□ -0.58
GTF3C1-204ENST00000564664 TRHRP34981 398 aaPredicted RBP11.43□□□□□ -0.58
GTF3C1-204ENST00000564664 GGT5P36269 586 aa11.43□□□□□ -0.58
GTF3C1-204ENST00000564664 ALDH6A1Q02252 535 aaKnown RBP11.43□□□□□ -0.58
GTF3C1-204ENST00000564664 TERF2Q15554 542 aa11.43□□□□□ -0.58
GTF3C1-204ENST00000564664 C1QL3Q5VWW1 255 aa11.43□□□□□ -0.58
GTF3C1-204ENST00000564664 FCRLBQ6BAA4 426 aa11.43□□□□□ -0.58
GTF3C1-204ENST00000564664 XKRXQ6PP77 449 aa11.43□□□□□ -0.58
GTF3C1-204ENST00000564664 FRA10AC1Q70Z53 315 aa11.43□□□□□ -0.58
GTF3C1-204ENST00000564664 MAATS1Q7Z4T9 603 aa11.43□□□□□ -0.58
GTF3C1-204ENST00000564664 ANKMY2Q8IV38 441 aa11.43□□□□□ -0.58
GTF3C1-204ENST00000564664 ARMC10Q8N2F6 343 aa11.43□□□□□ -0.58
GTF3C1-204ENST00000564664 ZNF808Q8N4W9 903 aaPredicted RBP11.43□□□□□ -0.58
GTF3C1-204ENST00000564664 ANKRD53Q8N9V6 530 aa11.43□□□□□ -0.58
GTF3C1-204ENST00000564664 ADAMTS18Q8TE60 1221 aa11.43□□□□□ -0.58
GTF3C1-204ENST00000564664 PYROXD1Q8WU10 500 aa11.43□□□□□ -0.58
GTF3C1-204ENST00000564664 TSLPQ969D9 159 aa11.43□□□□□ -0.58
GTF3C1-204ENST00000564664 RHBDF1Q96CC6 855 aa11.43□□□□□ -0.58
GTF3C1-204ENST00000564664 FAR2Q96K12 515 aa11.43□□□□□ -0.58
GTF3C1-204ENST00000564664 TSNARE1Q96NA8 513 aa11.43□□□□□ -0.58
GTF3C1-204ENST00000564664 NPAS2Q99743 824 aa11.43□□□□□ -0.58
GTF3C1-204ENST00000564664 EGFL8Q99944 293 aa11.43□□□□□ -0.58
GTF3C1-204ENST00000564664 MCMBPQ9BTE3 642 aa11.43□□□□□ -0.58
GTF3C1-204ENST00000564664 EHD1Q9H4M9 534 aa11.43□□□□□ -0.58
GTF3C1-204ENST00000564664 CDCP1Q9H5V8 836 aa11.43□□□□□ -0.58
GTF3C1-204ENST00000564664 CNOT10Q9H9A5 744 aaKnown RBP11.43□□□□□ -0.58
GTF3C1-204ENST00000564664 GPAMQ9HCL2 828 aa11.43□□□□□ -0.58
GTF3C1-204ENST00000564664 CHST11Q9NPF2 352 aa11.43□□□□□ -0.58
GTF3C1-204ENST00000564664 LRFN1Q9P244 771 aa11.43□□□□□ -0.58
GTF3C1-204ENST00000564664 ZNF835Q9Y2P0 537 aa11.43□□□□□ -0.58
GTF3C1-204ENST00000564664 PSAT1Q9Y617 370 aa11.43□□□□□ -0.58
GTF3C1-204ENST00000564664 IGKV3D-11A0A0A0MRZ8 115 aa11.42□□□□□ -0.58
GTF3C1-204ENST00000564664 TCRBV16S1A1N1A0A5B0 115 aa11.42□□□□□ -0.58
GTF3C1-204ENST00000564664 FAM187AA6NFU0 413 aa11.42□□□□□ -0.58
GTF3C1-204ENST00000564664 ZNF860A6NHJ4 632 aa11.42□□□□□ -0.58
GTF3C1-204ENST00000564664 SAGE2PA6NJ88 616 aa11.42□□□□□ -0.58
GTF3C1-204ENST00000564664 CLDN4O14493 209 aa11.42□□□□□ -0.58
GTF3C1-204ENST00000564664 FCHO1O14526 889 aa11.42□□□□□ -0.58
GTF3C1-204ENST00000564664 NEURL1O76050 574 aa11.42□□□□□ -0.58
GTF3C1-204ENST00000564664 GSTA2P09210 222 aa11.42□□□□□ -0.58
GTF3C1-204ENST00000564664 SLC6A12P48065 614 aa11.42□□□□□ -0.58
GTF3C1-204ENST00000564664 CYB561P49447 251 aa11.42□□□□□ -0.58
GTF3C1-204ENST00000564664 MLF1P58340 268 aa11.42□□□□□ -0.58
GTF3C1-204ENST00000564664 RAB8AP61006 207 aa11.42□□□□□ -0.58
GTF3C1-204ENST00000564664 ATP6V0D1P61421 351 aa11.42□□□□□ -0.58
GTF3C1-204ENST00000564664 OC90Q02509 493 aaPredicted RBP11.42□□□□□ -0.58
GTF3C1-204ENST00000564664 HYAL2Q12891 473 aa11.42□□□□□ -0.58
GTF3C1-204ENST00000564664 CALCOCO2Q13137 446 aa11.42□□□□□ -0.58
GTF3C1-204ENST00000564664 RCN2Q14257 317 aa11.42□□□□□ -0.58
GTF3C1-204ENST00000564664 SPINK14Q6IE38 97 aa11.42□□□□□ -0.58
GTF3C1-204ENST00000564664 TMIGD1Q6UXZ0 262 aa11.42□□□□□ -0.58
GTF3C1-204ENST00000564664 Q6ZPB1 254 aaPredicted RBP11.42□□□□□ -0.58
GTF3C1-204ENST00000564664 SLCO4C1Q6ZQN7 724 aa11.42□□□□□ -0.58
GTF3C1-204ENST00000564664 TMPRSS11BQ86T26 416 aa11.42□□□□□ -0.58
GTF3C1-204ENST00000564664 ZBED8Q8IZ13 594 aa11.42□□□□□ -0.58
GTF3C1-204ENST00000564664 SHISA5Q8N114 240 aa11.42□□□□□ -0.58
GTF3C1-204ENST00000564664 POGLUT1Q8NBL1 392 aa11.42□□□□□ -0.58
GTF3C1-204ENST00000564664 GAL3ST3Q96A11 431 aa11.42□□□□□ -0.58
GTF3C1-204ENST00000564664 GPR137Q96N19 417 aa11.42□□□□□ -0.58
GTF3C1-204ENST00000564664 SIGLEC12Q96PQ1 595 aa11.42□□□□□ -0.58
GTF3C1-204ENST00000564664 CPNE1Q99829 537 aa11.42□□□□□ -0.58
GTF3C1-204ENST00000564664 TRIM51Q9BSJ1 452 aa11.42□□□□□ -0.58
GTF3C1-204ENST00000564664 DEFB126Q9BYW3 111 aa11.42□□□□□ -0.58
GTF3C1-204ENST00000564664 SPNS1Q9H2V7 528 aa11.42□□□□□ -0.58
GTF3C1-204ENST00000564664 WHRNQ9P202 907 aa11.42□□□□□ -0.58
GTF3C1-204ENST00000564664 TXNDC16Q9P2K2 825 aa11.42□□□□□ -0.58
GTF3C1-204ENST00000564664 IKZF3Q9UKT9 509 aa11.42□□□□□ -0.58
GTF3C1-204ENST00000564664 PPIEQ9UNP9 301 aaKnown RBP11.42□□□□□ -0.58
GTF3C1-204ENST00000564664 LRIT2A6NDA9 550 aa11.41□□□□□ -0.58
GTF3C1-204ENST00000564664 NPEPPSL1A6NEC2 478 aa11.41□□□□□ -0.58
GTF3C1-204ENST00000564664 ANKDD1BA6NHY2 528 aa11.41□□□□□ -0.58
GTF3C1-204ENST00000564664 PRSS44E7EML9 344 aa11.41□□□□□ -0.58
GTF3C1-204ENST00000564664 CLGNO14967 610 aa11.41□□□□□ -0.58
GTF3C1-204ENST00000564664 SLC19A2O60779 497 aa11.41□□□□□ -0.58
GTF3C1-204ENST00000564664 ABCB7O75027 752 aa11.41□□□□□ -0.58
GTF3C1-204ENST00000564664 DNAJB6O75190 326 aa11.41□□□□□ -0.58
GTF3C1-204ENST00000564664 CLEC3AO75596 197 aa11.41□□□□□ -0.58
GTF3C1-204ENST00000564664 WDR47O94967 919 aa11.41□□□□□ -0.58
GTF3C1-204ENST00000564664 HNF4AP41235 474 aa11.41□□□□□ -0.58
GTF3C1-204ENST00000564664 RPL21P46778 160 aaKnown RBP11.41□□□□□ -0.58
GTF3C1-204ENST00000564664 HLCSP50747 726 aa11.41□□□□□ -0.58
GTF3C1-204ENST00000564664 SMSP52788 366 aa11.41□□□□□ -0.58
GTF3C1-204ENST00000564664 PGGT1BP53609 377 aa11.41□□□□□ -0.58
GTF3C1-204ENST00000564664 HSD17B7P56937 341 aa11.41□□□□□ -0.58
GTF3C1-204ENST00000564664 OLR1P78380 273 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms