RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 WDPCPO95876 746 aa18.79■□□□□ 0.6
SHCBP1-203ENST00000564272 SMIM10L1P0DMW3 83 aa18.79■□□□□ 0.6
SHCBP1-203ENST00000564272 TFEBP19484 476 aa18.79■□□□□ 0.6
SHCBP1-203ENST00000564272 HNRNPH1P31943 449 aaKnown RBP18.79■□□□□ 0.6
SHCBP1-203ENST00000564272 AP2B1P63010 937 aa18.79■□□□□ 0.6
SHCBP1-203ENST00000564272 PDK4Q16654 411 aa18.79■□□□□ 0.6
SHCBP1-203ENST00000564272 ADNP2Q6IQ32 1131 aa18.79■□□□□ 0.6
SHCBP1-203ENST00000564272 NIPAL1Q6NVV3 410 aa18.79■□□□□ 0.6
SHCBP1-203ENST00000564272 PAPD4Q6PIY7 484 aaKnown RBP18.79■□□□□ 0.6
SHCBP1-203ENST00000564272 TBC1D1Q86TI0 1168 aaPredicted RBP18.79■□□□□ 0.6
SHCBP1-203ENST00000564272 KRT78Q8N1N4 520 aa18.79■□□□□ 0.6
SHCBP1-203ENST00000564272 MMGT1Q8N4V1 131 aa18.79■□□□□ 0.6
SHCBP1-203ENST00000564272 OR1N1Q8NGS0 311 aa18.79■□□□□ 0.6
SHCBP1-203ENST00000564272 PRR7Q8TB68 274 aa18.79■□□□□ 0.6
SHCBP1-203ENST00000564272 SMIM10Q96HG1 83 aa18.79■□□□□ 0.6
SHCBP1-203ENST00000564272 RHBGQ9H310 441 aa18.79■□□□□ 0.6
SHCBP1-203ENST00000564272 NINJ2Q9NZG7 142 aa18.79■□□□□ 0.6
SHCBP1-203ENST00000564272 BLACEA4D250 179 aa18.78■□□□□ 0.6
SHCBP1-203ENST00000564272 SUPT3HB4E1H0 165 aa18.78■□□□□ 0.6
SHCBP1-203ENST00000564272 CLGNO14967 610 aa18.78■□□□□ 0.6
SHCBP1-203ENST00000564272 CCNT2O60583 730 aaKnown RBP18.78■□□□□ 0.6
SHCBP1-203ENST00000564272 SUPT3HO75486 399 aa18.78■□□□□ 0.6
SHCBP1-203ENST00000564272 LTA4HP09960 611 aaKnown RBP18.78■□□□□ 0.6
SHCBP1-203ENST00000564272 EPORP19235 508 aa18.78■□□□□ 0.6
SHCBP1-203ENST00000564272 JAK1P23458 1154 aa18.78■□□□□ 0.6
SHCBP1-203ENST00000564272 CRABP2P29373 138 aa18.78■□□□□ 0.6
SHCBP1-203ENST00000564272 IRF9Q00978 393 aa18.78■□□□□ 0.6
SHCBP1-203ENST00000564272 ZNF33BQ06732 778 aa18.78■□□□□ 0.6
SHCBP1-203ENST00000564272 UAP1Q16222 522 aaPredicted RBP18.78■□□□□ 0.6
SHCBP1-203ENST00000564272 XKR6Q5GH73 641 aa18.78■□□□□ 0.6
SHCBP1-203ENST00000564272 MROH9Q5TGP6 573 aa18.78■□□□□ 0.6
SHCBP1-203ENST00000564272 FCRLBQ6BAA4 426 aa18.78■□□□□ 0.6
SHCBP1-203ENST00000564272 VN1R5Q7Z5H4 357 aa18.78■□□□□ 0.6
SHCBP1-203ENST00000564272 ISCA2Q86U28 154 aa18.78■□□□□ 0.6
SHCBP1-203ENST00000564272 CA13Q8N1Q1 262 aa18.78■□□□□ 0.6
SHCBP1-203ENST00000564272 TTLQ8NG68 377 aa18.78■□□□□ 0.6
SHCBP1-203ENST00000564272 GRHL3Q8TE85 626 aa18.78■□□□□ 0.6
SHCBP1-203ENST00000564272 KCTD4Q8WVF5 259 aa18.78■□□□□ 0.6
SHCBP1-203ENST00000564272 GAL3ST3Q96A11 431 aa18.78■□□□□ 0.6
SHCBP1-203ENST00000564272 CAPS2Q9BXY5 557 aa18.78■□□□□ 0.6
SHCBP1-203ENST00000564272 NMRAL1Q9HBL8 299 aa18.78■□□□□ 0.6
SHCBP1-203ENST00000564272 NUDT4Q9NZJ9 180 aa18.78■□□□□ 0.6
SHCBP1-203ENST00000564272 COPG2Q9UBF2 871 aa18.78■□□□□ 0.6
SHCBP1-203ENST00000564272 DMGDHQ9UI17 866 aaKnown RBP18.78■□□□□ 0.6
SHCBP1-203ENST00000564272 HIVEP3Q5T1R4 2406 aa18.77■□□□□ 0.6
SHCBP1-203ENST00000564272 HMX2A2RU54 273 aa18.77■□□□□ 0.6
SHCBP1-203ENST00000564272 ANKUB1A6NFN9 424 aa18.77■□□□□ 0.6
SHCBP1-203ENST00000564272 A8MUI8 341 aa18.77■□□□□ 0.6
SHCBP1-203ENST00000564272 FAM227AF5H4B4 570 aa18.77■□□□□ 0.6
SHCBP1-203ENST00000564272 UBXN8O00124 270 aa18.77■□□□□ 0.6
SHCBP1-203ENST00000564272 ERI3O43414 337 aaKnown RBP18.77■□□□□ 0.6
SHCBP1-203ENST00000564272 RNH1P13489 461 aaKnown RBP18.77■□□□□ 0.6
SHCBP1-203ENST00000564272 CD22P20273 847 aa18.77■□□□□ 0.6
SHCBP1-203ENST00000564272 TNFSF10P50591 281 aa18.77■□□□□ 0.6
SHCBP1-203ENST00000564272 OR4D2P58180 307 aa18.77■□□□□ 0.6
SHCBP1-203ENST00000564272 STXBP1P61764 594 aaKnown RBP18.77■□□□□ 0.6
SHCBP1-203ENST00000564272 BTN3A2P78410 334 aa18.77■□□□□ 0.6
SHCBP1-203ENST00000564272 BTG2P78543 158 aa18.77■□□□□ 0.6
SHCBP1-203ENST00000564272 ACTN3Q08043 901 aaPredicted RBP18.77■□□□□ 0.6
SHCBP1-203ENST00000564272 DOC2AQ14183 400 aa18.77■□□□□ 0.6
SHCBP1-203ENST00000564272 ABHD17BQ5VST6 288 aa18.77■□□□□ 0.6
SHCBP1-203ENST00000564272 LRRC70Q7Z2Q7 622 aa18.77■□□□□ 0.6
SHCBP1-203ENST00000564272 CENPLQ8N0S6 344 aaPredicted RBP18.77■□□□□ 0.6
SHCBP1-203ENST00000564272 STAG3L4Q8TBR4 150 aa18.77■□□□□ 0.6
SHCBP1-203ENST00000564272 HAS2Q92819 552 aa18.77■□□□□ 0.6
SHCBP1-203ENST00000564272 NXNL1Q96CM4 212 aa18.77■□□□□ 0.6
SHCBP1-203ENST00000564272 MS4A6EQ96DS6 147 aa18.77■□□□□ 0.6
SHCBP1-203ENST00000564272 PTCD3Q96EY7 689 aaKnown RBP18.77■□□□□ 0.6
SHCBP1-203ENST00000564272 ATOH8Q96SQ7 321 aa18.77■□□□□ 0.6
SHCBP1-203ENST00000564272 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.77■□□□□ 0.6
SHCBP1-203ENST00000564272 EHD1Q9H4M9 534 aa18.77■□□□□ 0.6
SHCBP1-203ENST00000564272 NT5DC2Q9H857 520 aa18.77■□□□□ 0.6
SHCBP1-203ENST00000564272 KCNK13Q9HB14 408 aa18.77■□□□□ 0.6
SHCBP1-203ENST00000564272 AGPAT4Q9NRZ5 378 aa18.77■□□□□ 0.6
SHCBP1-203ENST00000564272 USP9YO00507 2555 aaPredicted RBP18.76■□□□□ 0.59
SHCBP1-203ENST00000564272 TRAV17A0A0B4J275 112 aa18.76■□□□□ 0.59
SHCBP1-203ENST00000564272 LRIT2A6NDA9 550 aa18.76■□□□□ 0.59
SHCBP1-203ENST00000564272 E2F3O00716 465 aa18.76■□□□□ 0.59
SHCBP1-203ENST00000564272 KERAO60938 352 aa18.76■□□□□ 0.59
SHCBP1-203ENST00000564272 TBX6O95947 436 aaPredicted RBP18.76■□□□□ 0.59
SHCBP1-203ENST00000564272 RNF224P0DH78 156 aa18.76■□□□□ 0.59
SHCBP1-203ENST00000564272 MAOAP21397 527 aa18.76■□□□□ 0.59
SHCBP1-203ENST00000564272 EXT1Q16394 746 aa18.76■□□□□ 0.59
SHCBP1-203ENST00000564272 QSOX2Q6ZRP7 698 aa18.76■□□□□ 0.59
SHCBP1-203ENST00000564272 M1APQ8TC57 530 aa18.76■□□□□ 0.59
SHCBP1-203ENST00000564272 UBTD2Q8WUN7 234 aa18.76■□□□□ 0.59
SHCBP1-203ENST00000564272 WDR34Q96EX3 536 aa18.76■□□□□ 0.59
SHCBP1-203ENST00000564272 PTCHD1Q96NR3 888 aa18.76■□□□□ 0.59
SHCBP1-203ENST00000564272 LPAR4Q99677 370 aa18.76■□□□□ 0.59
SHCBP1-203ENST00000564272 CD244Q9BZW8 370 aa18.76■□□□□ 0.59
SHCBP1-203ENST00000564272 PITHD1Q9GZP4 211 aaPredicted RBP18.76■□□□□ 0.59
SHCBP1-203ENST00000564272 MMP25Q9NPA2 562 aa18.76■□□□□ 0.59
SHCBP1-203ENST00000564272 SNX15Q9NRS6 342 aa18.76■□□□□ 0.59
SHCBP1-203ENST00000564272 STMN3Q9NZ72 180 aa18.76■□□□□ 0.59
SHCBP1-203ENST00000564272 MTRF1LQ9UGC7 380 aaKnown RBP18.76■□□□□ 0.59
SHCBP1-203ENST00000564272 ZNF490Q9ULM2 529 aaPredicted RBP18.76■□□□□ 0.59
SHCBP1-203ENST00000564272 ACOT9Q9Y305 439 aa18.76■□□□□ 0.59
SHCBP1-203ENST00000564272 PSMD12O00232 456 aaPredicted RBP18.75■□□□□ 0.59
SHCBP1-203ENST00000564272 PRMT3O60678 531 aa18.75■□□□□ 0.59
SHCBP1-203ENST00000564272 CLEC3AO75596 197 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms