RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 STATHP02808 62 aa12.2□□□□□ -0.46
CLK3-214ENST00000564096 ZNF888P0CJ79 500 aaPredicted RBP12.2□□□□□ -0.46
CLK3-214ENST00000564096 G6PDP11413 515 aa12.2□□□□□ -0.46
CLK3-214ENST00000564096 BCKDHAP12694 445 aa12.2□□□□□ -0.46
CLK3-214ENST00000564096 ALOX12P18054 663 aa12.2□□□□□ -0.46
CLK3-214ENST00000564096 HIST1H1TP22492 207 aaPredicted RBP12.2□□□□□ -0.46
CLK3-214ENST00000564096 PRDX6P30041 224 aa12.2□□□□□ -0.46
CLK3-214ENST00000564096 CCKBRP32239 447 aa12.2□□□□□ -0.46
CLK3-214ENST00000564096 CSTF2P33240 577 aaKnown RBP eCLIP12.2□□□□□ -0.46
CLK3-214ENST00000564096 EMP3P54852 163 aa12.2□□□□□ -0.46
CLK3-214ENST00000564096 MTTPP55157 894 aa12.2□□□□□ -0.46
CLK3-214ENST00000564096 ITGA1P56199 1179 aa12.2□□□□□ -0.46
CLK3-214ENST00000564096 KCNK10P57789 538 aa12.2□□□□□ -0.46
CLK3-214ENST00000564096 TRA2BP62995 288 aaKnown RBP12.2□□□□□ -0.46
CLK3-214ENST00000564096 HYAL2Q12891 473 aa12.2□□□□□ -0.46
CLK3-214ENST00000564096 KRT72Q14CN4 511 aa12.2□□□□□ -0.46
CLK3-214ENST00000564096 DPY19L1Q2PZI1 675 aa12.2□□□□□ -0.46
CLK3-214ENST00000564096 MUM1Q2TAK8 710 aa12.2□□□□□ -0.46
CLK3-214ENST00000564096 HKDC1Q2TB90 917 aa12.2□□□□□ -0.46
CLK3-214ENST00000564096 CCDC157Q569K6 752 aa12.2□□□□□ -0.46
CLK3-214ENST00000564096 WASHC2DQ5SRD0 308 aa12.2□□□□□ -0.46
CLK3-214ENST00000564096 YOD1Q5VVQ6 348 aaPredicted RBP12.2□□□□□ -0.46
CLK3-214ENST00000564096 OR4C11Q6IEV9 310 aa12.2□□□□□ -0.46
CLK3-214ENST00000564096 TMEM214Q6NUQ4 689 aaKnown RBP12.2□□□□□ -0.46
CLK3-214ENST00000564096 TLDC1Q6P9B6 456 aa12.2□□□□□ -0.46
CLK3-214ENST00000564096 ABHD17CQ6PCB6 329 aa12.2□□□□□ -0.46
CLK3-214ENST00000564096 CCDC121Q6ZUS5 278 aa12.2□□□□□ -0.46
CLK3-214ENST00000564096 ARHGAP22Q7Z5H3 698 aa12.2□□□□□ -0.46
CLK3-214ENST00000564096 GLRX5Q86SX6 157 aa12.2□□□□□ -0.46
CLK3-214ENST00000564096 PIP4P1Q86T03 277 aa12.2□□□□□ -0.46
CLK3-214ENST00000564096 OR4N4Q8N0Y3 316 aa12.2□□□□□ -0.46
CLK3-214ENST00000564096 ZCCHC7Q8N3Z6 543 aaKnown RBP12.2□□□□□ -0.46
CLK3-214ENST00000564096 FITM2Q8N6M3 262 aa12.2□□□□□ -0.46
CLK3-214ENST00000564096 AGBL5Q8NDL9 886 aa12.2□□□□□ -0.46
CLK3-214ENST00000564096 ZNF285Q96NJ3 590 aa12.2□□□□□ -0.46
CLK3-214ENST00000564096 TUBB6Q9BUF5 446 aa12.2□□□□□ -0.46
CLK3-214ENST00000564096 FAIM2Q9BWQ8 316 aa12.2□□□□□ -0.46
CLK3-214ENST00000564096 DDX31Q9H8H2 851 aaKnown RBP12.2□□□□□ -0.46
CLK3-214ENST00000564096 ANKHQ9HCJ1 492 aa12.2□□□□□ -0.46
CLK3-214ENST00000564096 SERTAD3Q9UJW9 196 aa12.2□□□□□ -0.46
CLK3-214ENST00000564096 SRPK3Q9UPE1 567 aa12.2□□□□□ -0.46
CLK3-214ENST00000564096 GPR45Q9Y5Y3 372 aa12.2□□□□□ -0.46
CLK3-214ENST00000564096 SLC22A7Q9Y694 548 aa12.2□□□□□ -0.46
CLK3-214ENST00000564096 SPACA6W5XKT8 324 aa12.2□□□□□ -0.46
CLK3-214ENST00000564096 CABIN1Q9Y6J0 2220 aa12.19□□□□□ -0.46
CLK3-214ENST00000564096 B3GALT2O43825 422 aa12.19□□□□□ -0.46
CLK3-214ENST00000564096 SLC22A3O75751 556 aa12.19□□□□□ -0.46
CLK3-214ENST00000564096 TBX6O95947 436 aaPredicted RBP12.19□□□□□ -0.46
CLK3-214ENST00000564096 KLK1P06870 262 aa12.19□□□□□ -0.46
CLK3-214ENST00000564096 PRPS1L1P21108 318 aa12.19□□□□□ -0.46
CLK3-214ENST00000564096 PIK3R1P27986 724 aa12.19□□□□□ -0.46
CLK3-214ENST00000564096 BSGP35613 385 aa12.19□□□□□ -0.46
CLK3-214ENST00000564096 GABRA4P48169 554 aa12.19□□□□□ -0.46
CLK3-214ENST00000564096 MNAT1P51948 309 aa12.19□□□□□ -0.46
CLK3-214ENST00000564096 KLF10Q13118 480 aa12.19□□□□□ -0.46
CLK3-214ENST00000564096 KCNAB1Q14722 419 aa12.19□□□□□ -0.46
CLK3-214ENST00000564096 PTGR1Q14914 329 aa12.19□□□□□ -0.46
CLK3-214ENST00000564096 SLC9A5Q14940 896 aa12.19□□□□□ -0.46
CLK3-214ENST00000564096 TRIP6Q15654 476 aaKnown RBP12.19□□□□□ -0.46
CLK3-214ENST00000564096 GPR19Q15760 415 aa12.19□□□□□ -0.46
CLK3-214ENST00000564096 ZSCAN26Q16670 478 aa12.19□□□□□ -0.46
CLK3-214ENST00000564096 PRTGQ2VWP7 1150 aa12.19□□□□□ -0.46
CLK3-214ENST00000564096 ASCL5Q7RTU5 278 aa12.19□□□□□ -0.46
CLK3-214ENST00000564096 R3HCC1LQ7Z5L2 792 aaKnown RBP12.19□□□□□ -0.46
CLK3-214ENST00000564096 BPHLQ86WA6 291 aaPredicted RBP12.19□□□□□ -0.46
CLK3-214ENST00000564096 TMEM132CQ8N3T6 1108 aa12.19□□□□□ -0.46
CLK3-214ENST00000564096 KCT2Q8NC54 265 aa12.19□□□□□ -0.46
CLK3-214ENST00000564096 ADAMTS18Q8TE60 1221 aa12.19□□□□□ -0.46
CLK3-214ENST00000564096 UTP15Q8TED0 518 aaKnown RBP12.19□□□□□ -0.46
CLK3-214ENST00000564096 C11orf24Q96F05 449 aaPredicted RBP12.19□□□□□ -0.46
CLK3-214ENST00000564096 TSSK3Q96PN8 268 aa12.19□□□□□ -0.46
CLK3-214ENST00000564096 DEPDC7Q96QD5 511 aa12.19□□□□□ -0.46
CLK3-214ENST00000564096 SERINC2Q96SA4 455 aa12.19□□□□□ -0.46
CLK3-214ENST00000564096 PRPF18Q99633 342 aaKnown RBP12.19□□□□□ -0.46
CLK3-214ENST00000564096 MACROD1Q9BQ69 325 aa12.19□□□□□ -0.46
CLK3-214ENST00000564096 SLC25A23Q9BV35 468 aa12.19□□□□□ -0.46
CLK3-214ENST00000564096 CCDC106Q9BWC9 280 aa12.19□□□□□ -0.46
CLK3-214ENST00000564096 MYNNQ9NPC7 610 aa12.19□□□□□ -0.46
CLK3-214ENST00000564096 ENAMQ9NRM1 1142 aa12.19□□□□□ -0.46
CLK3-214ENST00000564096 FGF21Q9NSA1 209 aa12.19□□□□□ -0.46
CLK3-214ENST00000564096 TXLNGQ9NUQ3 528 aa12.19□□□□□ -0.46
CLK3-214ENST00000564096 PHF11Q9UIL8 331 aa12.19□□□□□ -0.46
CLK3-214ENST00000564096 RARRES3Q9UL19 164 aa12.19□□□□□ -0.46
CLK3-214ENST00000564096 DLGAP4Q9Y2H0 992 aa12.19□□□□□ -0.46
CLK3-214ENST00000564096 MUC6Q6W4X9 2439 aa12.19□□□□□ -0.46
CLK3-214ENST00000564096 A0A0A6YYD5 115 aa12.18□□□□□ -0.46
CLK3-214ENST00000564096 HYKKA2RU49 373 aa12.18□□□□□ -0.46
CLK3-214ENST00000564096 FAM234BA2RU67 622 aa12.18□□□□□ -0.46
CLK3-214ENST00000564096 FITM1A5D6W6 292 aa12.18□□□□□ -0.46
CLK3-214ENST00000564096 BBIP1A8MTZ0 92 aa12.18□□□□□ -0.46
CLK3-214ENST00000564096 RTCAO00442 366 aaKnown RBP12.18□□□□□ -0.46
CLK3-214ENST00000564096 NR5A2O00482 541 aa12.18□□□□□ -0.46
CLK3-214ENST00000564096 HNRNPCL1O60812 293 aaKnown RBP12.18□□□□□ -0.46
CLK3-214ENST00000564096 CSRP1P21291 193 aaKnown RBP12.18□□□□□ -0.46
CLK3-214ENST00000564096 GPX3P22352 226 aa12.18□□□□□ -0.46
CLK3-214ENST00000564096 CALB2P22676 271 aa12.18□□□□□ -0.46
CLK3-214ENST00000564096 ATP5A1P25705 553 aaKnown RBP12.18□□□□□ -0.46
CLK3-214ENST00000564096 CERS1P27544 350 aa12.18□□□□□ -0.46
CLK3-214ENST00000564096 TPP2P29144 1249 aaPredicted RBP12.18□□□□□ -0.46
CLK3-214ENST00000564096 AVPR1BP47901 424 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms