RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 ISL1P61371 349 aa12.16□□□□□ -0.46
COMMD4-209ENST00000564068 AP1S1P61966 158 aa12.16□□□□□ -0.46
COMMD4-209ENST00000564068 KEAP1Q14145 624 aa12.16□□□□□ -0.46
COMMD4-209ENST00000564068 CPZQ66K79 652 aa12.16□□□□□ -0.46
COMMD4-209ENST00000564068 HMGN2P46Q86SG4 172 aa12.16□□□□□ -0.46
COMMD4-209ENST00000564068 ZNF655Q8N720 491 aaPredicted RBP12.16□□□□□ -0.46
COMMD4-209ENST00000564068 OR10T2Q8NGX3 314 aa12.16□□□□□ -0.46
COMMD4-209ENST00000564068 BOCQ9BWV1 1114 aa12.16□□□□□ -0.46
COMMD4-209ENST00000564068 HDHD5Q9BXW7 423 aa12.16□□□□□ -0.46
COMMD4-209ENST00000564068 RNF121Q9H920 327 aa12.16□□□□□ -0.46
COMMD4-209ENST00000564068 CREBZFQ9NS37 354 aa12.16□□□□□ -0.46
COMMD4-209ENST00000564068 EXTL2Q9UBQ6 330 aa12.16□□□□□ -0.46
COMMD4-209ENST00000564068 RPS6KB2Q9UBS0 482 aa12.16□□□□□ -0.46
COMMD4-209ENST00000564068 UTS2RQ9UKP6 389 aa12.16□□□□□ -0.46
COMMD4-209ENST00000564068 PPIEQ9UNP9 301 aaKnown RBP12.16□□□□□ -0.46
COMMD4-209ENST00000564068 PTGESO14684 152 aa12.16□□□□□ -0.46
COMMD4-209ENST00000564068 URODP06132 367 aa12.16□□□□□ -0.46
COMMD4-209ENST00000564068 ACSL1P33121 698 aa12.16□□□□□ -0.46
COMMD4-209ENST00000564068 DEFA5Q01523 94 aa12.16□□□□□ -0.46
COMMD4-209ENST00000564068 SELENBP1Q13228 472 aa12.16□□□□□ -0.46
COMMD4-209ENST00000564068 ADAM15Q13444 863 aa12.16□□□□□ -0.46
COMMD4-209ENST00000564068 RAET1GQ6H3X3 334 aa12.16□□□□□ -0.46
COMMD4-209ENST00000564068 PTRH1Q86Y79 214 aaKnown RBP12.16□□□□□ -0.46
COMMD4-209ENST00000564068 SLC43A3Q8NBI5 491 aa12.16□□□□□ -0.46
COMMD4-209ENST00000564068 ZNF548Q8NEK5 533 aaPredicted RBP12.16□□□□□ -0.46
COMMD4-209ENST00000564068 TNFAIP8L1Q8WVP5 186 aa12.16□□□□□ -0.46
COMMD4-209ENST00000564068 RFKQ969G6 155 aa12.16□□□□□ -0.46
COMMD4-209ENST00000564068 CCDC120Q96HB5 630 aa12.16□□□□□ -0.46
COMMD4-209ENST00000564068 ABCG5Q9H222 651 aa12.16□□□□□ -0.46
COMMD4-209ENST00000564068 TAS2R16Q9NYV7 291 aa12.16□□□□□ -0.46
COMMD4-209ENST00000564068 SARDHQ9UL12 918 aa12.16□□□□□ -0.46
COMMD4-209ENST00000564068 ANKRD36CQ5JPF3 1778 aa12.16□□□□□ -0.46
COMMD4-209ENST00000564068 SOBPA7XYQ1 873 aa12.16□□□□□ -0.46
COMMD4-209ENST00000564068 S100A9P06702 114 aaKnown RBP12.16□□□□□ -0.46
COMMD4-209ENST00000564068 SAGP10523 405 aaPredicted RBP12.16□□□□□ -0.46
COMMD4-209ENST00000564068 LAMP1P11279 417 aa12.16□□□□□ -0.46
COMMD4-209ENST00000564068 CRISP1P54107 249 aa12.16□□□□□ -0.46
COMMD4-209ENST00000564068 GINS1Q14691 196 aa12.16□□□□□ -0.46
COMMD4-209ENST00000564068 CEP68Q76N32 757 aa12.16□□□□□ -0.46
COMMD4-209ENST00000564068 VWA5B2Q8N398 1253 aa12.16□□□□□ -0.46
COMMD4-209ENST00000564068 OXR1Q8N573 874 aa12.16□□□□□ -0.46
COMMD4-209ENST00000564068 ASB15Q8WXK1 588 aa12.16□□□□□ -0.46
COMMD4-209ENST00000564068 APIPQ96GX9 242 aa12.16□□□□□ -0.46
COMMD4-209ENST00000564068 PSKH2Q96QS6 385 aa12.16□□□□□ -0.46
COMMD4-209ENST00000564068 HLA-DPB1P04440 258 aa12.16□□□□□ -0.46
COMMD4-209ENST00000564068 DAPP51397 102 aa12.16□□□□□ -0.46
COMMD4-209ENST00000564068 PCBP2Q15366 365 aaKnown RBP eCLIP12.16□□□□□ -0.461e-11■■■■■ 48
COMMD4-209ENST00000564068 SF1Q15637 639 aaKnown RBP12.16□□□□□ -0.46
COMMD4-209ENST00000564068 PAQR9Q6ZVX9 377 aa12.16□□□□□ -0.46
COMMD4-209ENST00000564068 RBM23Q86U06 439 aaKnown RBP12.16□□□□□ -0.46
COMMD4-209ENST00000564068 B3GNT7Q8NFL0 401 aa12.16□□□□□ -0.46
COMMD4-209ENST00000564068 CD200R1Q8TD46 325 aa12.16□□□□□ -0.46
COMMD4-209ENST00000564068 RNF167Q9H6Y7 350 aa12.16□□□□□ -0.46
COMMD4-209ENST00000564068 NOX1Q9Y5S8 564 aa12.16□□□□□ -0.46
COMMD4-209ENST00000564068 EIF2DP41214 584 aaKnown RBP12.15□□□□□ -0.46
COMMD4-209ENST00000564068 GPR1P46091 355 aa12.15□□□□□ -0.46
COMMD4-209ENST00000564068 TAS2R50P59544 299 aa12.15□□□□□ -0.46
COMMD4-209ENST00000564068 RAB8AP61006 207 aa12.15□□□□□ -0.46
COMMD4-209ENST00000564068 CXCR4P61073 352 aa12.15□□□□□ -0.46
COMMD4-209ENST00000564068 LRRC26Q2I0M4 334 aa12.15□□□□□ -0.46
COMMD4-209ENST00000564068 CATSPEREQ5SY80 951 aa12.15□□□□□ -0.46
COMMD4-209ENST00000564068 LSM14AQ8ND56 463 aaKnown RBP12.15□□□□□ -0.46
COMMD4-209ENST00000564068 NEIL3Q8TAT5 605 aa12.15□□□□□ -0.46
COMMD4-209ENST00000564068 GATAD2BQ8WXI9 593 aa12.15□□□□□ -0.46
COMMD4-209ENST00000564068 ING5Q8WYH8 240 aa12.15□□□□□ -0.46
COMMD4-209ENST00000564068 PEX13Q92968 403 aa12.15□□□□□ -0.46
COMMD4-209ENST00000564068 MRPL48Q96GC5 212 aaKnown RBP12.15□□□□□ -0.46
COMMD4-209ENST00000564068 FAIM2Q9BWQ8 316 aa12.15□□□□□ -0.46
COMMD4-209ENST00000564068 COMMD9Q9P000 198 aa12.15□□□□□ -0.46
COMMD4-209ENST00000564068 BCORQ6W2J9 1755 aa12.15□□□□□ -0.46
COMMD4-209ENST00000564068 IQCMA0A1B0GVH7 501 aa12.15□□□□□ -0.46
COMMD4-209ENST00000564068 FCER2P06734 321 aa12.15□□□□□ -0.46
COMMD4-209ENST00000564068 RPL4P36578 427 aaKnown RBP12.15□□□□□ -0.46
COMMD4-209ENST00000564068 AFF1P51825 1210 aaKnown RBP12.15□□□□□ -0.46
COMMD4-209ENST00000564068 PSMD4P55036 377 aaKnown RBP12.15□□□□□ -0.46
COMMD4-209ENST00000564068 SLBPQ14493 270 aaKnown RBP eCLIP12.15□□□□□ -0.46
COMMD4-209ENST00000564068 AAK1Q2M2I8 961 aa12.15□□□□□ -0.46
COMMD4-209ENST00000564068 FAM180BQ6P0A1 224 aa12.15□□□□□ -0.46
COMMD4-209ENST00000564068 GPR149Q86SP6 731 aa12.15□□□□□ -0.46
COMMD4-209ENST00000564068 LRRTM3Q86VH5 581 aa12.15□□□□□ -0.46
COMMD4-209ENST00000564068 C17orf64Q86WR6 236 aa12.15□□□□□ -0.46
COMMD4-209ENST00000564068 DNASE1L2Q92874 299 aa12.15□□□□□ -0.46
COMMD4-209ENST00000564068 PGAP3Q96FM1 320 aaPredicted RBP12.15□□□□□ -0.46
COMMD4-209ENST00000564068 ZCCHC3Q9NUD5 404 aaKnown RBP12.15□□□□□ -0.46
COMMD4-209ENST00000564068 GJD2Q9UKL4 321 aa12.15□□□□□ -0.46
COMMD4-209ENST00000564068 DLGAP4Q9Y2H0 992 aa12.15□□□□□ -0.46
COMMD4-209ENST00000564068 CLDN24A6NM45 220 aa12.15□□□□□ -0.46
COMMD4-209ENST00000564068 AKAP8O43823 692 aaKnown RBP12.15□□□□□ -0.46
COMMD4-209ENST00000564068 PCDH8O95206 1070 aa12.15□□□□□ -0.46
COMMD4-209ENST00000564068 PIM1P11309 404 aaPredicted RBP12.15□□□□□ -0.46
COMMD4-209ENST00000564068 RPS13P62277 151 aaKnown RBP12.15□□□□□ -0.46
COMMD4-209ENST00000564068 VLDLRP98155 873 aa12.15□□□□□ -0.46
COMMD4-209ENST00000564068 MLLT1Q03111 559 aaPredicted RBP12.15□□□□□ -0.46
COMMD4-209ENST00000564068 USP41Q3LFD5 358 aa12.15□□□□□ -0.46
COMMD4-209ENST00000564068 GPR33Q49SQ1 333 aa12.15□□□□□ -0.46
COMMD4-209ENST00000564068 LIN54Q6MZP7 749 aa12.15□□□□□ -0.46
COMMD4-209ENST00000564068 PAMR1Q6UXH9 720 aa12.15□□□□□ -0.46
COMMD4-209ENST00000564068 LINGO2Q7L985 606 aa12.15□□□□□ -0.46
COMMD4-209ENST00000564068 LRRC70Q7Z2Q7 622 aa12.15□□□□□ -0.46
COMMD4-209ENST00000564068 GGHQ92820 318 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms