RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 TGIF2Q9GZN2 237 aa14.96□□□□□ -0.01
RNF40-205ENST00000563909 CCDC68Q9H2F9 335 aa14.96□□□□□ -0.01
RNF40-205ENST00000563909 CDC42EP4Q9H3Q1 356 aaKnown RBP14.96□□□□□ -0.01
RNF40-205ENST00000563909 NEUROD4Q9HD90 331 aa14.96□□□□□ -0.01
RNF40-205ENST00000563909 MKKSQ9NPJ1 570 aaPredicted RBP14.96□□□□□ -0.01
RNF40-205ENST00000563909 FBXO6Q9NRD1 293 aaPredicted RBP14.96□□□□□ -0.01
RNF40-205ENST00000563909 NINJ2Q9NZG7 142 aa14.96□□□□□ -0.01
RNF40-205ENST00000563909 CRYL1Q9Y2S2 319 aa14.96□□□□□ -0.01
RNF40-205ENST00000563909 COMMD10Q9Y6G5 202 aa14.96□□□□□ -0.01
RNF40-205ENST00000563909 HIVEP2P31629 2446 aa14.95□□□□□ -0.02
RNF40-205ENST00000563909 A0A0J9YVX5 310 aa14.95□□□□□ -0.02
RNF40-205ENST00000563909 GABRR3A8MPY1 467 aa14.95□□□□□ -0.02
RNF40-205ENST00000563909 TARM1B6A8C7 271 aa14.95□□□□□ -0.02
RNF40-205ENST00000563909 INAFM1C9JVW0 142 aa14.95□□□□□ -0.02
RNF40-205ENST00000563909 TFECO14948 347 aaPredicted RBP14.95□□□□□ -0.02
RNF40-205ENST00000563909 PRPF4O43172 522 aaKnown RBP eCLIP14.95□□□□□ -0.02
RNF40-205ENST00000563909 TUBBP07437 444 aa14.95□□□□□ -0.02
RNF40-205ENST00000563909 PKMP14618 531 aaKnown RBP14.95□□□□□ -0.02
RNF40-205ENST00000563909 FMO4P31512 558 aa14.95□□□□□ -0.02
RNF40-205ENST00000563909 PPP2R2BQ00005 443 aa14.95□□□□□ -0.02
RNF40-205ENST00000563909 MPP1Q00013 466 aa14.95□□□□□ -0.02
RNF40-205ENST00000563909 ILF2Q12905 390 aaKnown RBP14.95□□□□□ -0.02
RNF40-205ENST00000563909 ERCC6LQ2NKX8 1250 aa14.95□□□□□ -0.02
RNF40-205ENST00000563909 WDR93Q6P2C0 686 aa14.95□□□□□ -0.02
RNF40-205ENST00000563909 UNC5DQ6UXZ4 953 aa14.95□□□□□ -0.02
RNF40-205ENST00000563909 SLC26A11Q86WA9 606 aa14.95□□□□□ -0.02
RNF40-205ENST00000563909 KRTAP1-3Q8IUG1 177 aa14.95□□□□□ -0.02
RNF40-205ENST00000563909 OR10Q1Q8NGQ4 319 aa14.95□□□□□ -0.02
RNF40-205ENST00000563909 MENTQ9BUN1 341 aa14.95□□□□□ -0.02
RNF40-205ENST00000563909 RRAGDQ9NQL2 400 aaPredicted RBP14.95□□□□□ -0.02
RNF40-205ENST00000563909 CRIM1Q9NZV1 1036 aa14.95□□□□□ -0.02
RNF40-205ENST00000563909 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.95□□□□□ -0.02
RNF40-205ENST00000563909 V9GYY5 206 aaPredicted RBP14.95□□□□□ -0.02
RNF40-205ENST00000563909 FAM159BA6NKW6 160 aa14.94□□□□□ -0.02
RNF40-205ENST00000563909 A6NNC1 897 aa14.94□□□□□ -0.02
RNF40-205ENST00000563909 KPNA5O15131 536 aa14.94□□□□□ -0.02
RNF40-205ENST00000563909 NME2P1O60361 137 aa14.94□□□□□ -0.02
RNF40-205ENST00000563909 PRMT3O60678 531 aa14.94□□□□□ -0.02
RNF40-205ENST00000563909 SLC25A12O75746 678 aa14.94□□□□□ -0.02
RNF40-205ENST00000563909 HAUS5O94927 633 aa14.94□□□□□ -0.02
RNF40-205ENST00000563909 AHSGP02765 367 aa14.94□□□□□ -0.02
RNF40-205ENST00000563909 NME2P22392 152 aa14.94□□□□□ -0.02
RNF40-205ENST00000563909 SLC26A3P40879 764 aa14.94□□□□□ -0.02
RNF40-205ENST00000563909 CSE1LP55060 971 aaKnown RBP14.94□□□□□ -0.02
RNF40-205ENST00000563909 NKX6-1P78426 367 aaPredicted RBP14.94□□□□□ -0.02
RNF40-205ENST00000563909 EMC4Q5J8M3 183 aa14.94□□□□□ -0.02
RNF40-205ENST00000563909 TRMT10CQ7L0Y3 403 aaKnown RBP14.94□□□□□ -0.02
RNF40-205ENST00000563909 CPEB2Q7Z5Q1 589 aaKnown RBP14.94□□□□□ -0.02
RNF40-205ENST00000563909 AMER3Q8N944 861 aa14.94□□□□□ -0.02
RNF40-205ENST00000563909 FBF1Q8TES7 1133 aa14.94□□□□□ -0.02
RNF40-205ENST00000563909 MMABQ96EY8 250 aaPredicted RBP14.94□□□□□ -0.02
RNF40-205ENST00000563909 BIRC8Q96P09 236 aa14.94□□□□□ -0.02
RNF40-205ENST00000563909 IL17FQ96PD4 163 aa14.94□□□□□ -0.02
RNF40-205ENST00000563909 SLC6A16Q9GZN6 736 aa14.94□□□□□ -0.02
RNF40-205ENST00000563909 TXNDC16Q9P2K2 825 aa14.94□□□□□ -0.02
RNF40-205ENST00000563909 CORO1CQ9ULV4 474 aaPredicted RBP14.94□□□□□ -0.02
RNF40-205ENST00000563909 E5RI56 91 aa14.93□□□□□ -0.02
RNF40-205ENST00000563909 NRP2O60462 931 aa14.93□□□□□ -0.02
RNF40-205ENST00000563909 RPN2P04844 631 aa14.93□□□□□ -0.02
RNF40-205ENST00000563909 ANXA5P08758 320 aa14.93□□□□□ -0.02
RNF40-205ENST00000563909 FAM153BP0C7A2 387 aa14.93□□□□□ -0.02
RNF40-205ENST00000563909 CHRM3P20309 590 aa14.93□□□□□ -0.02
RNF40-205ENST00000563909 RFC3P40938 356 aa14.93□□□□□ -0.02
RNF40-205ENST00000563909 VSNL1P62760 191 aa14.93□□□□□ -0.02
RNF40-205ENST00000563909 NAB1Q13506 487 aa14.93□□□□□ -0.02
RNF40-205ENST00000563909 SYT16Q17RD7 645 aa14.93□□□□□ -0.02
RNF40-205ENST00000563909 FAM153CQ494X1 144 aa14.93□□□□□ -0.02
RNF40-205ENST00000563909 CTSL3PQ5NE16 218 aa14.93□□□□□ -0.02
RNF40-205ENST00000563909 LANCL3Q6ZV70 420 aa14.93□□□□□ -0.02
RNF40-205ENST00000563909 STRA8Q7Z7C7 330 aa14.93□□□□□ -0.02
RNF40-205ENST00000563909 ZC3H7AQ8IWR0 971 aaKnown RBP14.93□□□□□ -0.02
RNF40-205ENST00000563909 GSPT2Q8IYD1 628 aaKnown RBP14.93□□□□□ -0.02
RNF40-205ENST00000563909 SLC22A15Q8IZD6 547 aa14.93□□□□□ -0.02
RNF40-205ENST00000563909 OR5M3Q8NGP4 307 aa14.93□□□□□ -0.02
RNF40-205ENST00000563909 CFAP61Q8NHU2 1237 aa14.93□□□□□ -0.02
RNF40-205ENST00000563909 COX4I2Q96KJ9 171 aa14.93□□□□□ -0.02
RNF40-205ENST00000563909 DMRT3Q9NQL9 472 aa14.93□□□□□ -0.02
RNF40-205ENST00000563909 SMYD2Q9NRG4 433 aa14.93□□□□□ -0.02
RNF40-205ENST00000563909 SCN2AQ99250 2005 aa14.92□□□□□ -0.02
RNF40-205ENST00000563909 IQCF5A8MTL0 148 aa14.92□□□□□ -0.02
RNF40-205ENST00000563909 RNF212BA8MTL3 300 aa14.92□□□□□ -0.02
RNF40-205ENST00000563909 HS6ST1O60243 411 aa14.92□□□□□ -0.02
RNF40-205ENST00000563909 PDE9AO76083 593 aa14.92□□□□□ -0.02
RNF40-205ENST00000563909 ACSL3O95573 720 aa14.92□□□□□ -0.02
RNF40-205ENST00000563909 APOA4P06727 396 aa14.92□□□□□ -0.02
RNF40-205ENST00000563909 TFEBP19484 476 aa14.92□□□□□ -0.02
RNF40-205ENST00000563909 GABRB3P28472 473 aa14.92□□□□□ -0.02
RNF40-205ENST00000563909 CCR7P32248 378 aa14.92□□□□□ -0.02
RNF40-205ENST00000563909 HSPA14Q0VDF9 509 aa14.92□□□□□ -0.02
RNF40-205ENST00000563909 GRB7Q14451 532 aa14.92□□□□□ -0.02
RNF40-205ENST00000563909 TMED2Q15363 201 aa14.92□□□□□ -0.02
RNF40-205ENST00000563909 PRTGQ2VWP7 1150 aa14.92□□□□□ -0.02
RNF40-205ENST00000563909 KBTBD12Q3ZCT8 623 aa14.92□□□□□ -0.02
RNF40-205ENST00000563909 CMPK2Q5EBM0 449 aa14.92□□□□□ -0.02
RNF40-205ENST00000563909 ZNF468Q5VIY5 522 aaPredicted RBP14.92□□□□□ -0.02
RNF40-205ENST00000563909 DCUN1D3Q8IWE4 304 aa14.92□□□□□ -0.02
RNF40-205ENST00000563909 CTAGE3PQ8IX95 158 aa14.92□□□□□ -0.02
RNF40-205ENST00000563909 KRT222Q8N1A0 295 aa14.92□□□□□ -0.02
RNF40-205ENST00000563909 CIARTQ8N365 385 aaPredicted RBP14.92□□□□□ -0.02
RNF40-205ENST00000563909 SLC5A8Q8N695 610 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms