RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 RNH1P13489 461 aaKnown RBP16.61■□□□□ 0.25
NME3-205ENST00000563854 STMN1P16949 149 aa16.61■□□□□ 0.25
NME3-205ENST00000563854 MAOAP21397 527 aa16.61■□□□□ 0.25
NME3-205ENST00000563854 GP5P40197 560 aa16.61■□□□□ 0.25
NME3-205ENST00000563854 SLC6A12P48065 614 aa16.61■□□□□ 0.25
NME3-205ENST00000563854 HSPA7P48741 367 aa16.61■□□□□ 0.25
NME3-205ENST00000563854 SLC26A5P58743 744 aa16.61■□□□□ 0.25
NME3-205ENST00000563854 TAS2R50P59544 299 aa16.61■□□□□ 0.25
NME3-205ENST00000563854 BTN3A2P78410 334 aa16.61■□□□□ 0.25
NME3-205ENST00000563854 BTG2P78543 158 aa16.61■□□□□ 0.25
NME3-205ENST00000563854 OC90Q02509 493 aaPredicted RBP16.61■□□□□ 0.25
NME3-205ENST00000563854 HYAL2Q12891 473 aa16.61■□□□□ 0.25
NME3-205ENST00000563854 ILF2Q12905 390 aaKnown RBP16.61■□□□□ 0.25
NME3-205ENST00000563854 SLMAPQ14BN4 828 aa16.61■□□□□ 0.25
NME3-205ENST00000563854 ZNF766Q5HY98 468 aa16.61■□□□□ 0.25
NME3-205ENST00000563854 C1QL3Q5VWW1 255 aa16.61■□□□□ 0.25
NME3-205ENST00000563854 GFRALQ6UXV0 394 aa16.61■□□□□ 0.25
NME3-205ENST00000563854 KIF2BQ8N4N8 673 aa16.61■□□□□ 0.25
NME3-205ENST00000563854 SLC5A8Q8N695 610 aa16.61■□□□□ 0.25
NME3-205ENST00000563854 PPM1NQ8N819 430 aa16.61■□□□□ 0.25
NME3-205ENST00000563854 ESAMQ96AP7 390 aa16.61■□□□□ 0.25
NME3-205ENST00000563854 FAR2Q96K12 515 aa16.61■□□□□ 0.25
NME3-205ENST00000563854 GPR22Q99680 433 aa16.61■□□□□ 0.25
NME3-205ENST00000563854 TMEM79Q9BSE2 394 aa16.61■□□□□ 0.25
NME3-205ENST00000563854 RAB17Q9H0T7 212 aa16.61■□□□□ 0.25
NME3-205ENST00000563854 MMP25Q9NPA2 562 aa16.61■□□□□ 0.25
NME3-205ENST00000563854 KLHL1Q9NR64 748 aa16.61■□□□□ 0.25
NME3-205ENST00000563854 CD274Q9NZQ7 290 aa16.61■□□□□ 0.25
NME3-205ENST00000563854 FAM159BA6NKW6 160 aa16.6■□□□□ 0.25
NME3-205ENST00000563854 FAM227AF5H4B4 570 aa16.6■□□□□ 0.25
NME3-205ENST00000563854 CLGNO14967 610 aa16.6■□□□□ 0.25
NME3-205ENST00000563854 MAN1A2O60476 641 aa16.6■□□□□ 0.25
NME3-205ENST00000563854 FAM155BO75949 473 aa16.6■□□□□ 0.25
NME3-205ENST00000563854 S100BP04271 92 aaPredicted RBP16.6■□□□□ 0.25
NME3-205ENST00000563854 SERPINA6P08185 405 aa16.6■□□□□ 0.25
NME3-205ENST00000563854 GMPRP36959 345 aa16.6■□□□□ 0.25
NME3-205ENST00000563854 PER3P56645 1201 aa16.6■□□□□ 0.25
NME3-205ENST00000563854 GPX6P59796 221 aa16.6■□□□□ 0.25
NME3-205ENST00000563854 STXBP1P61764 594 aaKnown RBP16.6■□□□□ 0.25
NME3-205ENST00000563854 TUBA3CQ13748 450 aa16.6■□□□□ 0.25
NME3-205ENST00000563854 OR4D1Q15615 310 aa16.6■□□□□ 0.25
NME3-205ENST00000563854 MEP1AQ16819 746 aa16.6■□□□□ 0.25
NME3-205ENST00000563854 TUBA3EQ6PEY2 450 aa16.6■□□□□ 0.25
NME3-205ENST00000563854 TMIGD1Q6UXZ0 262 aa16.6■□□□□ 0.25
NME3-205ENST00000563854 SLCO4C1Q6ZQN7 724 aa16.6■□□□□ 0.25
NME3-205ENST00000563854 RAPH1Q70E73 1250 aa16.6■□□□□ 0.25
NME3-205ENST00000563854 FJX1Q86VR8 437 aa16.6■□□□□ 0.25
NME3-205ENST00000563854 KRT78Q8N1N4 520 aa16.6■□□□□ 0.25
NME3-205ENST00000563854 TCAIMQ8N3R3 496 aa16.6■□□□□ 0.25
NME3-205ENST00000563854 CREB3L4Q8TEY5 395 aa16.6■□□□□ 0.25
NME3-205ENST00000563854 UTP23Q9BRU9 249 aaKnown RBP16.6■□□□□ 0.25
NME3-205ENST00000563854 DNAJC11Q9NVH1 559 aa16.6■□□□□ 0.25
NME3-205ENST00000563854 RNF112Q9ULX5 631 aa16.6■□□□□ 0.25
NME3-205ENST00000563854 SCN2AQ99250 2005 aa16.59■□□□□ 0.25
NME3-205ENST00000563854 WIPF3A6NGB9 483 aa16.59■□□□□ 0.25
NME3-205ENST00000563854 GABRR3A8MPY1 467 aa16.59■□□□□ 0.25
NME3-205ENST00000563854 TAPBPO15533 448 aa16.59■□□□□ 0.25
NME3-205ENST00000563854 ERI3O43414 337 aaKnown RBP16.59■□□□□ 0.25
NME3-205ENST00000563854 UNC5CO95185 931 aa16.59■□□□□ 0.25
NME3-205ENST00000563854 WISP3O95389 354 aaPredicted RBP16.59■□□□□ 0.25
NME3-205ENST00000563854 CRYABP02511 175 aaKnown RBP16.59■□□□□ 0.25
NME3-205ENST00000563854 CD1DP15813 335 aa16.59■□□□□ 0.25
NME3-205ENST00000563854 TDGF1P3P51864 188 aa16.59■□□□□ 0.25
NME3-205ENST00000563854 RAB10P61026 200 aa16.59■□□□□ 0.25
NME3-205ENST00000563854 ATP6V0D1P61421 351 aa16.59■□□□□ 0.25
NME3-205ENST00000563854 ETF1P62495 437 aaKnown RBP16.59■□□□□ 0.25
NME3-205ENST00000563854 CBLBQ13191 982 aa16.59■□□□□ 0.25
NME3-205ENST00000563854 EFTUD2Q15029 972 aaKnown RBP eCLIP16.59■□□□□ 0.256e-11■■■■■ 37.4
NME3-205ENST00000563854 OR1C1Q15619 314 aa16.59■□□□□ 0.25
NME3-205ENST00000563854 KBTBD12Q3ZCT8 623 aa16.59■□□□□ 0.25
NME3-205ENST00000563854 ZNF324BQ6AW86 544 aaPredicted RBP16.59■□□□□ 0.25
NME3-205ENST00000563854 QSOX2Q6ZRP7 698 aa16.59■□□□□ 0.25
NME3-205ENST00000563854 CA13Q8N1Q1 262 aa16.59■□□□□ 0.25
NME3-205ENST00000563854 ARMC2Q8NEN0 867 aa16.59■□□□□ 0.25
NME3-205ENST00000563854 TTLQ8NG68 377 aa16.59■□□□□ 0.25
NME3-205ENST00000563854 FBXO25Q8TCJ0 367 aa16.59■□□□□ 0.25
NME3-205ENST00000563854 GAL3ST3Q96A11 431 aa16.59■□□□□ 0.25
NME3-205ENST00000563854 SIGLEC12Q96PQ1 595 aa16.59■□□□□ 0.25
NME3-205ENST00000563854 NPAS2Q99743 824 aa16.59■□□□□ 0.25
NME3-205ENST00000563854 HES7Q9BYE0 225 aa16.59■□□□□ 0.25
NME3-205ENST00000563854 AICDAQ9GZX7 198 aa16.59■□□□□ 0.25
NME3-205ENST00000563854 CDCP1Q9H5V8 836 aa16.59■□□□□ 0.25
NME3-205ENST00000563854 CNOT10Q9H9A5 744 aaKnown RBP16.59■□□□□ 0.25
NME3-205ENST00000563854 NECTIN3Q9NQS3 549 aa16.59■□□□□ 0.25
NME3-205ENST00000563854 PRDM9Q9NQV7 894 aa16.59■□□□□ 0.25
NME3-205ENST00000563854 ANKDD1BA6NHY2 528 aa16.58■□□□□ 0.24
NME3-205ENST00000563854 CCNT2O60583 730 aaKnown RBP16.58■□□□□ 0.24
NME3-205ENST00000563854 GSTA2P09210 222 aa16.58■□□□□ 0.24
NME3-205ENST00000563854 SMIM10L1P0DMW3 83 aa16.58■□□□□ 0.24
NME3-205ENST00000563854 MST1P26927 711 aa16.58■□□□□ 0.24
NME3-205ENST00000563854 HNRNPH1P31943 449 aaKnown RBP16.58■□□□□ 0.24
NME3-205ENST00000563854 SPRP35270 261 aaPredicted RBP16.58■□□□□ 0.24
NME3-205ENST00000563854 MAGEA4P43358 317 aa16.58■□□□□ 0.24
NME3-205ENST00000563854 PLA2G16P53816 162 aa16.58■□□□□ 0.24
NME3-205ENST00000563854 CAV1Q03135 178 aa16.58■□□□□ 0.24
NME3-205ENST00000563854 TRADDQ15628 312 aa16.58■□□□□ 0.24
NME3-205ENST00000563854 XKR6Q5GH73 641 aa16.58■□□□□ 0.24
NME3-205ENST00000563854 ZNF787Q6DD87 383 aa16.58■□□□□ 0.24
NME3-205ENST00000563854 SULT1C3Q6IMI6 304 aa16.58■□□□□ 0.24
NME3-205ENST00000563854 H3F3CQ6NXT2 135 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms