RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 SEC16BQ96JE7 1060 aa15.86■□□□□ 0.13
CLK3-210ENST00000563112 PITHD1Q9GZP4 211 aaPredicted RBP15.86■□□□□ 0.13
CLK3-210ENST00000563112 NT5DC2Q9H857 520 aa15.86■□□□□ 0.13
CLK3-210ENST00000563112 ABI3Q9P2A4 366 aa15.86■□□□□ 0.13
CLK3-210ENST00000563112 RNF112Q9ULX5 631 aa15.86■□□□□ 0.13
CLK3-210ENST00000563112 SVILO95425 2214 aa15.86■□□□□ 0.13
CLK3-210ENST00000563112 OR5H15A6NDH6 313 aa15.85■□□□□ 0.13
CLK3-210ENST00000563112 ANKDD1BA6NHY2 528 aa15.85■□□□□ 0.13
CLK3-210ENST00000563112 TAPBPO15533 448 aa15.85■□□□□ 0.13
CLK3-210ENST00000563112 PRMT3O60678 531 aa15.85■□□□□ 0.13
CLK3-210ENST00000563112 B4GALT2O60909 372 aa15.85■□□□□ 0.13
CLK3-210ENST00000563112 URI1O94763 535 aaPredicted RBP15.85■□□□□ 0.13
CLK3-210ENST00000563112 WDPCPO95876 746 aa15.85■□□□□ 0.13
CLK3-210ENST00000563112 B3GALT4O96024 378 aa15.85■□□□□ 0.13
CLK3-210ENST00000563112 F10P00742 488 aa15.85■□□□□ 0.13
CLK3-210ENST00000563112 EDN3P14138 238 aa15.85■□□□□ 0.13
CLK3-210ENST00000563112 CRABP2P29373 138 aa15.85■□□□□ 0.13
CLK3-210ENST00000563112 SLC7A5Q01650 507 aa15.85■□□□□ 0.13
CLK3-210ENST00000563112 TRADDQ15628 312 aa15.85■□□□□ 0.13
CLK3-210ENST00000563112 INAQ16352 499 aa15.85■□□□□ 0.13
CLK3-210ENST00000563112 TBC1D1Q86TI0 1168 aaPredicted RBP15.85■□□□□ 0.13
CLK3-210ENST00000563112 SNX31Q8N9S9 440 aa15.85■□□□□ 0.13
CLK3-210ENST00000563112 ARMC2Q8NEN0 867 aa15.85■□□□□ 0.13
CLK3-210ENST00000563112 STAG3L4Q8TBR4 150 aa15.85■□□□□ 0.13
CLK3-210ENST00000563112 CREB3L4Q8TEY5 395 aa15.85■□□□□ 0.13
CLK3-210ENST00000563112 TSLPQ969D9 159 aa15.85■□□□□ 0.13
CLK3-210ENST00000563112 KIAA1191Q96A73 305 aa15.85■□□□□ 0.13
CLK3-210ENST00000563112 UBXN10Q96LJ8 280 aa15.85■□□□□ 0.13
CLK3-210ENST00000563112 PTCHD1Q96NR3 888 aa15.85■□□□□ 0.13
CLK3-210ENST00000563112 EHD1Q9H4M9 534 aa15.85■□□□□ 0.13
CLK3-210ENST00000563112 KLHL31Q9H511 634 aa15.85■□□□□ 0.13
CLK3-210ENST00000563112 NMRAL1Q9HBL8 299 aa15.85■□□□□ 0.13
CLK3-210ENST00000563112 POLEQ07864 2286 aa15.84■□□□□ 0.13
CLK3-210ENST00000563112 ICE1Q9Y2F5 2266 aa15.84■□□□□ 0.13
CLK3-210ENST00000563112 A0A088AWK7 358 aa15.84■□□□□ 0.13
CLK3-210ENST00000563112 DNAJB6O75190 326 aa15.84■□□□□ 0.13
CLK3-210ENST00000563112 C1QAP02745 245 aa15.84■□□□□ 0.13
CLK3-210ENST00000563112 SMIM10L1P0DMW3 83 aa15.84■□□□□ 0.13
CLK3-210ENST00000563112 ZNF10P21506 573 aaPredicted RBP15.84■□□□□ 0.13
CLK3-210ENST00000563112 HSPA7P48741 367 aa15.84■□□□□ 0.13
CLK3-210ENST00000563112 TAS2R50P59544 299 aa15.84■□□□□ 0.13
CLK3-210ENST00000563112 HYAL2Q12891 473 aa15.84■□□□□ 0.13
CLK3-210ENST00000563112 OR4D1Q15615 310 aa15.84■□□□□ 0.13
CLK3-210ENST00000563112 HIST2H2ACQ16777 129 aaPredicted RBP15.84■□□□□ 0.13
CLK3-210ENST00000563112 MEP1AQ16819 746 aa15.84■□□□□ 0.13
CLK3-210ENST00000563112 WHAMMP3Q1A5X7 153 aa15.84■□□□□ 0.13
CLK3-210ENST00000563112 XKR6Q5GH73 641 aa15.84■□□□□ 0.13
CLK3-210ENST00000563112 HIST2H2AA3Q6FI13 130 aa15.84■□□□□ 0.13
CLK3-210ENST00000563112 QSOX2Q6ZRP7 698 aa15.84■□□□□ 0.13
CLK3-210ENST00000563112 CEP128Q6ZU80 1094 aa15.84■□□□□ 0.13
CLK3-210ENST00000563112 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.84■□□□□ 0.13
CLK3-210ENST00000563112 EXT2Q93063 718 aa15.84■□□□□ 0.13
CLK3-210ENST00000563112 GAL3ST3Q96A11 431 aa15.84■□□□□ 0.13
CLK3-210ENST00000563112 SMIM10Q96HG1 83 aa15.84■□□□□ 0.13
CLK3-210ENST00000563112 C16orf45Q96MC5 204 aaPredicted RBP15.84■□□□□ 0.13
CLK3-210ENST00000563112 TMEM79Q9BSE2 394 aa15.84■□□□□ 0.13
CLK3-210ENST00000563112 LRRC1Q9BTT6 524 aa15.84■□□□□ 0.13
CLK3-210ENST00000563112 RHBGQ9H310 441 aa15.84■□□□□ 0.13
CLK3-210ENST00000563112 PRM3Q9NNZ6 103 aa15.84■□□□□ 0.13
CLK3-210ENST00000563112 MMP25Q9NPA2 562 aa15.84■□□□□ 0.13
CLK3-210ENST00000563112 OLAHQ9NV23 265 aa15.84■□□□□ 0.13
CLK3-210ENST00000563112 SLC5A6Q9Y289 635 aa15.84■□□□□ 0.13
CLK3-210ENST00000563112 DOPEY1Q5JWR5 2465 aa15.83■□□□□ 0.12
CLK3-210ENST00000563112 CPAMD8Q8IZJ3 1885 aa15.83■□□□□ 0.12
CLK3-210ENST00000563112 ESYT3A0FGR9 886 aa15.83■□□□□ 0.12
CLK3-210ENST00000563112 CTAGE15A4D2H0 777 aa15.83■□□□□ 0.12
CLK3-210ENST00000563112 CCNT2O60583 730 aaKnown RBP15.83■□□□□ 0.12
CLK3-210ENST00000563112 PRAMEF2O60811 474 aa15.83■□□□□ 0.12
CLK3-210ENST00000563112 CLEC3AO75596 197 aa15.83■□□□□ 0.12
CLK3-210ENST00000563112 FAM155BO75949 473 aa15.83■□□□□ 0.12
CLK3-210ENST00000563112 LTA4HP09960 611 aaKnown RBP15.83■□□□□ 0.12
CLK3-210ENST00000563112 PHBP35232 272 aa15.83■□□□□ 0.12
CLK3-210ENST00000563112 BTN3A2P78410 334 aa15.83■□□□□ 0.12
CLK3-210ENST00000563112 LAPTM5Q13571 262 aa15.83■□□□□ 0.12
CLK3-210ENST00000563112 PDK4Q16654 411 aa15.83■□□□□ 0.12
CLK3-210ENST00000563112 PAGE2BQ5JRK9 111 aa15.83■□□□□ 0.12
CLK3-210ENST00000563112 ACER2Q5QJU3 275 aa15.83■□□□□ 0.12
CLK3-210ENST00000563112 H3F3CQ6NXT2 135 aa15.83■□□□□ 0.12
CLK3-210ENST00000563112 CTAGE6Q86UF2 777 aa15.83■□□□□ 0.12
CLK3-210ENST00000563112 CYP4X1Q8N118 509 aa15.83■□□□□ 0.12
CLK3-210ENST00000563112 SLC5A8Q8N695 610 aa15.83■□□□□ 0.12
CLK3-210ENST00000563112 AMER2Q8N7J2 671 aa15.83■□□□□ 0.12
CLK3-210ENST00000563112 PDPRQ8NCN5 879 aa15.83■□□□□ 0.12
CLK3-210ENST00000563112 ESAMQ96AP7 390 aa15.83■□□□□ 0.12
CLK3-210ENST00000563112 PTCD3Q96EY7 689 aaKnown RBP15.83■□□□□ 0.12
CLK3-210ENST00000563112 C5orf34Q96MH7 638 aa15.83■□□□□ 0.12
CLK3-210ENST00000563112 EFCAB11Q9BUY7 163 aa15.83■□□□□ 0.12
CLK3-210ENST00000563112 NPLQ9BXD5 320 aaPredicted RBP15.83■□□□□ 0.12
CLK3-210ENST00000563112 ALG9Q9H6U8 611 aa15.83■□□□□ 0.12
CLK3-210ENST00000563112 PRDM9Q9NQV7 894 aa15.83■□□□□ 0.12
CLK3-210ENST00000563112 NUDT4Q9NZJ9 180 aa15.83■□□□□ 0.12
CLK3-210ENST00000563112 COPG2Q9UBF2 871 aa15.83■□□□□ 0.12
CLK3-210ENST00000563112 MTRF1LQ9UGC7 380 aaKnown RBP15.83■□□□□ 0.12
CLK3-210ENST00000563112 PTBP2Q9UKA9 531 aaKnown RBP15.83■□□□□ 0.12
CLK3-210ENST00000563112 ACOT9Q9Y305 439 aa15.83■□□□□ 0.12
CLK3-210ENST00000563112 ERI3O43414 337 aaKnown RBP15.82■□□□□ 0.12
CLK3-210ENST00000563112 CRYABP02511 175 aaKnown RBP15.82■□□□□ 0.12
CLK3-210ENST00000563112 SLC35E2BP0CK96 405 aa15.82■□□□□ 0.12
CLK3-210ENST00000563112 TFEBP19484 476 aa15.82■□□□□ 0.12
CLK3-210ENST00000563112 SLC26A5P58743 744 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms