RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 DEPDC1Q5TB30 811 aa17.87■□□□□ 0.45
RAB40C-207ENST00000563109 CACNA2D3Q8IZS8 1091 aa17.87■□□□□ 0.45
RAB40C-207ENST00000563109 OR9A4Q8NGU2 314 aa17.87■□□□□ 0.45
RAB40C-207ENST00000563109 FGF11Q92914 225 aa17.87■□□□□ 0.45
RAB40C-207ENST00000563109 RGMAQ96B86 450 aa17.87■□□□□ 0.45
RAB40C-207ENST00000563109 MAGEB18Q96M61 343 aa17.87■□□□□ 0.45
RAB40C-207ENST00000563109 HBEGFQ99075 208 aa17.87■□□□□ 0.45
RAB40C-207ENST00000563109 SPRY4Q9C004 299 aa17.87■□□□□ 0.45
RAB40C-207ENST00000563109 ZNF304Q9HCX3 659 aa17.87■□□□□ 0.45
RAB40C-207ENST00000563109 DKK4Q9UBT3 224 aa17.87■□□□□ 0.45
RAB40C-207ENST00000563109 GPN3Q9UHW5 284 aaPredicted RBP17.87■□□□□ 0.45
RAB40C-207ENST00000563109 ZDHHC2Q9UIJ5 367 aa17.87■□□□□ 0.45
RAB40C-207ENST00000563109 PADI1Q9ULC6 663 aa17.87■□□□□ 0.45
RAB40C-207ENST00000563109 NAALAD2Q9Y3Q0 740 aa17.87■□□□□ 0.45
RAB40C-207ENST00000563109 TMEM233B4DJY2 109 aa17.86■□□□□ 0.45
RAB40C-207ENST00000563109 H0YIG0 161 aa17.86■□□□□ 0.45
RAB40C-207ENST00000563109 SNNO75324 88 aaPredicted RBP17.86■□□□□ 0.45
RAB40C-207ENST00000563109 SEMA3DO95025 777 aa17.86■□□□□ 0.45
RAB40C-207ENST00000563109 TBX6O95947 436 aaPredicted RBP17.86■□□□□ 0.45
RAB40C-207ENST00000563109 ATXN8OSP0DMR3 200 aa17.86■□□□□ 0.45
RAB40C-207ENST00000563109 SERPINB3P29508 390 aa17.86■□□□□ 0.45
RAB40C-207ENST00000563109 SSR2P43308 183 aa17.86■□□□□ 0.45
RAB40C-207ENST00000563109 ABRAXAS2Q15018 415 aa17.86■□□□□ 0.45
RAB40C-207ENST00000563109 NKAIN1Q4KMZ8 207 aa17.86■□□□□ 0.45
RAB40C-207ENST00000563109 TIPARPQ7Z3E1 657 aaKnown RBP17.86■□□□□ 0.45
RAB40C-207ENST00000563109 DDIASQ8IXT1 998 aa17.86■□□□□ 0.45
RAB40C-207ENST00000563109 IL22RA1Q8N6P7 574 aa17.86■□□□□ 0.45
RAB40C-207ENST00000563109 ZNF781Q8N8C0 355 aa17.86■□□□□ 0.45
RAB40C-207ENST00000563109 TWIST2Q8WVJ9 160 aa17.86■□□□□ 0.45
RAB40C-207ENST00000563109 CKAP2Q8WWK9 683 aa17.86■□□□□ 0.45
RAB40C-207ENST00000563109 COL26A1Q96A83 441 aa17.86■□□□□ 0.45
RAB40C-207ENST00000563109 SORT1Q99523 831 aa17.86■□□□□ 0.45
RAB40C-207ENST00000563109 TBCDQ9BTW9 1192 aa17.86■□□□□ 0.45
RAB40C-207ENST00000563109 ZNF395Q9H8N7 513 aaPredicted RBP17.86■□□□□ 0.45
RAB40C-207ENST00000563109 LHX9Q9NQ69 397 aa17.86■□□□□ 0.45
RAB40C-207ENST00000563109 PFDN4Q9NQP4 134 aa17.86■□□□□ 0.45
RAB40C-207ENST00000563109 WDR70Q9NW82 654 aa17.86■□□□□ 0.45
RAB40C-207ENST00000563109 AHSPQ9NZD4 102 aa17.86■□□□□ 0.45
RAB40C-207ENST00000563109 IFT80Q9P2H3 777 aaPredicted RBP17.86■□□□□ 0.45
RAB40C-207ENST00000563109 MAU2Q9Y6X3 613 aa17.86■□□□□ 0.45
RAB40C-207ENST00000563109 A0A0G2JN53 185 aa17.85■□□□□ 0.45
RAB40C-207ENST00000563109 SERTM1A2A2V5 107 aa17.85■□□□□ 0.45
RAB40C-207ENST00000563109 SGK494L7N484 410 aa17.85■□□□□ 0.45
RAB40C-207ENST00000563109 SLC28A1O00337 649 aa17.85■□□□□ 0.45
RAB40C-207ENST00000563109 SAP18O00422 153 aaKnown RBP17.85■□□□□ 0.45
RAB40C-207ENST00000563109 FOXS1O43638 330 aa17.85■□□□□ 0.45
RAB40C-207ENST00000563109 GALR3O60755 368 aaPredicted RBP17.85■□□□□ 0.45
RAB40C-207ENST00000563109 SMIM10L1P0DMW3 83 aa17.85■□□□□ 0.45
RAB40C-207ENST00000563109 OR1D4P47884 311 aa17.85■□□□□ 0.45
RAB40C-207ENST00000563109 RPL14P50914 215 aaKnown RBP17.85■□□□□ 0.45
RAB40C-207ENST00000563109 ARFIP1P53367 373 aa17.85■□□□□ 0.45
RAB40C-207ENST00000563109 BTN3A2P78410 334 aa17.85■□□□□ 0.45
RAB40C-207ENST00000563109 DSG2Q14126 1118 aa17.85■□□□□ 0.45
RAB40C-207ENST00000563109 AP5B1Q2VPB7 878 aa17.85■□□□□ 0.45
RAB40C-207ENST00000563109 FAM219BQ5XKK7 198 aa17.85■□□□□ 0.45
RAB40C-207ENST00000563109 ZNF385CQ66K41 422 aaPredicted RBP17.85■□□□□ 0.45
RAB40C-207ENST00000563109 ABHD17CQ6PCB6 329 aa17.85■□□□□ 0.45
RAB40C-207ENST00000563109 SCIMPQ6UWF3 145 aa17.85■□□□□ 0.45
RAB40C-207ENST00000563109 UNQ6494/PRO21346Q6UXR6 183 aa17.85■□□□□ 0.45
RAB40C-207ENST00000563109 RNF165Q6ZSG1 346 aa17.85■□□□□ 0.45
RAB40C-207ENST00000563109 PRSS41Q7RTY9 318 aa17.85■□□□□ 0.45
RAB40C-207ENST00000563109 ZNF248Q8NDW4 579 aa17.85■□□□□ 0.45
RAB40C-207ENST00000563109 SNIP1Q8TAD8 396 aaKnown RBP17.85■□□□□ 0.45
RAB40C-207ENST00000563109 KIAA1143Q96AT1 154 aaPredicted RBP17.85■□□□□ 0.45
RAB40C-207ENST00000563109 SMIM10Q96HG1 83 aa17.85■□□□□ 0.45
RAB40C-207ENST00000563109 ACPTQ9BZG2 426 aa17.85■□□□□ 0.45
RAB40C-207ENST00000563109 C20orf27Q9GZN8 174 aa17.85■□□□□ 0.45
RAB40C-207ENST00000563109 AICDAQ9GZX7 198 aa17.85■□□□□ 0.45
RAB40C-207ENST00000563109 VPS29Q9UBQ0 182 aa17.85■□□□□ 0.45
RAB40C-207ENST00000563109 HAO1Q9UJM8 370 aa17.85■□□□□ 0.45
RAB40C-207ENST00000563109 C4orf51C9J302 202 aa17.84■□□□□ 0.45
RAB40C-207ENST00000563109 RGS14O43566 566 aa17.84■□□□□ 0.45
RAB40C-207ENST00000563109 B3GALT2O43825 422 aa17.84■□□□□ 0.45
RAB40C-207ENST00000563109 RDH16O75452 317 aa17.84■□□□□ 0.45
RAB40C-207ENST00000563109 SKAP2O75563 359 aaPredicted RBP17.84■□□□□ 0.45
RAB40C-207ENST00000563109 ETHE1O95571 254 aa17.84■□□□□ 0.45
RAB40C-207ENST00000563109 STAT5AP42229 794 aa17.84■□□□□ 0.45
RAB40C-207ENST00000563109 TSFMP43897 325 aaKnown RBP17.84■□□□□ 0.45
RAB40C-207ENST00000563109 MTTPP55157 894 aa17.84■□□□□ 0.45
RAB40C-207ENST00000563109 OCRLQ01968 901 aa17.84■□□□□ 0.45
RAB40C-207ENST00000563109 SLC9A5Q14940 896 aa17.84■□□□□ 0.45
RAB40C-207ENST00000563109 ATG14Q6ZNE5 492 aa17.84■□□□□ 0.45
RAB40C-207ENST00000563109 PAGE2Q7Z2X7 111 aa17.84■□□□□ 0.45
RAB40C-207ENST00000563109 NUDT13Q86X67 352 aa17.84■□□□□ 0.45
RAB40C-207ENST00000563109 DTX1Q86Y01 620 aa17.84■□□□□ 0.45
RAB40C-207ENST00000563109 CRLF3Q8IUI8 442 aa17.84■□□□□ 0.45
RAB40C-207ENST00000563109 DTWD1Q8N5C7 304 aa17.84■□□□□ 0.45
RAB40C-207ENST00000563109 CT55Q8WUE5 264 aa17.84■□□□□ 0.45
RAB40C-207ENST00000563109 KCNE4Q8WWG9 221 aa17.84■□□□□ 0.45
RAB40C-207ENST00000563109 FKBP10Q96AY3 582 aa17.84■□□□□ 0.45
RAB40C-207ENST00000563109 SERINC2Q96SA4 455 aa17.84■□□□□ 0.45
RAB40C-207ENST00000563109 CCT7Q99832 543 aa17.84■□□□□ 0.45
RAB40C-207ENST00000563109 YIPF2Q9BWQ6 316 aa17.84■□□□□ 0.45
RAB40C-207ENST00000563109 CHST8Q9H2A9 424 aa17.84■□□□□ 0.45
RAB40C-207ENST00000563109 CLK4Q9HAZ1 481 aaKnown RBP17.84■□□□□ 0.45
RAB40C-207ENST00000563109 DNAJC15Q9Y5T4 150 aa17.84■□□□□ 0.45
RAB40C-207ENST00000563109 FER1L5A0AVI2 2057 aa17.83■□□□□ 0.45
RAB40C-207ENST00000563109 SCN3AQ9NY46 2000 aa17.83■□□□□ 0.45
RAB40C-207ENST00000563109 ZNF860A6NHJ4 632 aa17.83■□□□□ 0.44
RAB40C-207ENST00000563109 PLPP1O14494 284 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms