RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 IL10P22301 178 aa12.71□□□□□ -0.37
CDH1-204ENST00000562118 ALAS2P22557 587 aa12.71□□□□□ -0.37
CDH1-204ENST00000562118 ALDH3A1P30838 453 aa12.71□□□□□ -0.37
CDH1-204ENST00000562118 EFNA3P52797 238 aa12.71□□□□□ -0.37
CDH1-204ENST00000562118 NAGLUP54802 743 aa12.71□□□□□ -0.37
CDH1-204ENST00000562118 RPS15P62841 145 aaKnown RBP12.71□□□□□ -0.37
CDH1-204ENST00000562118 CYP4F2P78329 520 aa12.71□□□□□ -0.37
CDH1-204ENST00000562118 MC1RQ01726 317 aa12.71□□□□□ -0.37
CDH1-204ENST00000562118 CDC20Q12834 499 aa12.71□□□□□ -0.37
CDH1-204ENST00000562118 CUL3Q13618 768 aa12.71□□□□□ -0.37
CDH1-204ENST00000562118 ZRSR2Q15696 482 aaKnown RBP12.71□□□□□ -0.37
CDH1-204ENST00000562118 DEPDC1Q5TB30 811 aa12.71□□□□□ -0.37
CDH1-204ENST00000562118 AGBL2Q5U5Z8 902 aa12.71□□□□□ -0.37
CDH1-204ENST00000562118 FRG2Q64ET8 278 aa12.71□□□□□ -0.37
CDH1-204ENST00000562118 ZC3H7AQ8IWR0 971 aaKnown RBP12.71□□□□□ -0.37
CDH1-204ENST00000562118 CDK15Q96Q40 435 aa12.71□□□□□ -0.37
CDH1-204ENST00000562118 FRG2BQ96QU4 278 aa12.71□□□□□ -0.37
CDH1-204ENST00000562118 OR1F2PQ96R84 312 aa12.71□□□□□ -0.37
CDH1-204ENST00000562118 GATA5Q9BWX5 397 aaPredicted RBP12.71□□□□□ -0.37
CDH1-204ENST00000562118 NPLQ9BXD5 320 aaPredicted RBP12.71□□□□□ -0.37
CDH1-204ENST00000562118 REXO4Q9GZR2 422 aaKnown RBP12.71□□□□□ -0.37
CDH1-204ENST00000562118 STMN4Q9H169 189 aaPredicted RBP12.71□□□□□ -0.37
CDH1-204ENST00000562118 CPNE5Q9HCH3 593 aa12.71□□□□□ -0.37
CDH1-204ENST00000562118 ANKHQ9HCJ1 492 aa12.71□□□□□ -0.37
CDH1-204ENST00000562118 PRDM7Q9NQW5 492 aa12.71□□□□□ -0.37
CDH1-204ENST00000562118 C14orf105Q9NVL8 296 aa12.71□□□□□ -0.37
CDH1-204ENST00000562118 ZNF282Q9UDV7 671 aaPredicted RBP12.71□□□□□ -0.37
CDH1-204ENST00000562118 PADI2Q9Y2J8 665 aa12.71□□□□□ -0.37
CDH1-204ENST00000562118 NAALAD2Q9Y3Q0 740 aa12.71□□□□□ -0.37
CDH1-204ENST00000562118 BOD1L1Q8NFC6 3051 aa12.71□□□□□ -0.38
CDH1-204ENST00000562118 SPENQ96T58 3664 aaKnown RBP12.7□□□□□ -0.38
CDH1-204ENST00000562118 CACNA1BQ00975 2339 aa12.7□□□□□ -0.38
CDH1-204ENST00000562118 PCDH17O14917 1159 aa12.7□□□□□ -0.38
CDH1-204ENST00000562118 NPHS1O60500 1241 aa12.7□□□□□ -0.38
CDH1-204ENST00000562118 TRIM13O60858 407 aa12.7□□□□□ -0.38
CDH1-204ENST00000562118 ZWINTO95229 277 aa12.7□□□□□ -0.38
CDH1-204ENST00000562118 BMP10O95393 424 aa12.7□□□□□ -0.38
CDH1-204ENST00000562118 ENO1P06733 434 aaKnown RBP12.7□□□□□ -0.38
CDH1-204ENST00000562118 BPGMP07738 259 aa12.7□□□□□ -0.38
CDH1-204ENST00000562118 FURINP09958 794 aa12.7□□□□□ -0.38
CDH1-204ENST00000562118 ZGLP1P0C6A0 271 aa12.7□□□□□ -0.38
CDH1-204ENST00000562118 SERPINB5P36952 375 aa12.7□□□□□ -0.38
CDH1-204ENST00000562118 AVPR1BP47901 424 aa12.7□□□□□ -0.38
CDH1-204ENST00000562118 RPS18P62269 152 aaKnown RBP12.7□□□□□ -0.38
CDH1-204ENST00000562118 SKP1P63208 163 aa12.7□□□□□ -0.38
CDH1-204ENST00000562118 SSPNQ14714 243 aa12.7□□□□□ -0.38
CDH1-204ENST00000562118 SLC9A5Q14940 896 aa12.7□□□□□ -0.38
CDH1-204ENST00000562118 CPSF6Q16630 551 aaKnown RBP eCLIP12.7□□□□□ -0.38
CDH1-204ENST00000562118 TOR1AIP1Q5JTV8 583 aa12.7□□□□□ -0.38
CDH1-204ENST00000562118 ARHGAP40Q5TG30 622 aa12.7□□□□□ -0.38
CDH1-204ENST00000562118 KHDRBS2Q5VWX1 349 aaKnown RBP12.7□□□□□ -0.38
CDH1-204ENST00000562118 ATG14Q6ZNE5 492 aa12.7□□□□□ -0.38
CDH1-204ENST00000562118 HDXQ7Z353 690 aa12.7□□□□□ -0.38
CDH1-204ENST00000562118 MILR1Q7Z6M3 343 aa12.7□□□□□ -0.38
CDH1-204ENST00000562118 TMEM151BQ8IW70 566 aa12.7□□□□□ -0.38
CDH1-204ENST00000562118 SHISA5Q8N114 240 aa12.7□□□□□ -0.38
CDH1-204ENST00000562118 METTL27Q8N6F8 245 aaPredicted RBP12.7□□□□□ -0.38
CDH1-204ENST00000562118 STT3BQ8TCJ2 826 aa12.7□□□□□ -0.38
CDH1-204ENST00000562118 TRPC4APQ8TEL6 797 aa12.7□□□□□ -0.38
CDH1-204ENST00000562118 MMABQ96EY8 250 aaPredicted RBP12.7□□□□□ -0.38
CDH1-204ENST00000562118 CMTM7Q96FZ5 175 aa12.7□□□□□ -0.38
CDH1-204ENST00000562118 CRELD1Q96HD1 420 aa12.7□□□□□ -0.38
CDH1-204ENST00000562118 IQCGQ9H095 443 aaKnown RBP12.7□□□□□ -0.38
CDH1-204ENST00000562118 BRF2Q9HAW0 419 aa12.7□□□□□ -0.38
CDH1-204ENST00000562118 LANCL2Q9NS86 450 aa12.7□□□□□ -0.38
CDH1-204ENST00000562118 NDOR1Q9UHB4 597 aa12.7□□□□□ -0.38
CDH1-204ENST00000562118 MAU2Q9Y6X3 613 aa12.7□□□□□ -0.38
CDH1-204ENST00000562118 MAGEB17A8MXT2 336 aa12.69□□□□□ -0.38
CDH1-204ENST00000562118 NPIPB8E9PQR5 432 aa12.69□□□□□ -0.38
CDH1-204ENST00000562118 SGK494L7N484 410 aa12.69□□□□□ -0.38
CDH1-204ENST00000562118 BIRC5O15392 142 aa12.69□□□□□ -0.38
CDH1-204ENST00000562118 RDH16O75452 317 aa12.69□□□□□ -0.38
CDH1-204ENST00000562118 SASH3O75995 380 aa12.69□□□□□ -0.38
CDH1-204ENST00000562118 ETHE1O95571 254 aa12.69□□□□□ -0.38
CDH1-204ENST00000562118 ITGB2P05107 769 aa12.69□□□□□ -0.38
CDH1-204ENST00000562118 HSD3B1P14060 373 aa12.69□□□□□ -0.38
CDH1-204ENST00000562118 TSPAN8P19075 237 aa12.69□□□□□ -0.38
CDH1-204ENST00000562118 HSD3B2P26439 372 aa12.69□□□□□ -0.38
CDH1-204ENST00000562118 ARRB2P32121 409 aa12.69□□□□□ -0.38
CDH1-204ENST00000562118 SERPINB4P48594 390 aa12.69□□□□□ -0.38
CDH1-204ENST00000562118 COL28A1Q2UY09 1125 aa12.69□□□□□ -0.38
CDH1-204ENST00000562118 DEFB134Q4QY38 66 aa12.69□□□□□ -0.38
CDH1-204ENST00000562118 CES4AQ5XG92 561 aa12.69□□□□□ -0.38
CDH1-204ENST00000562118 ZNF793Q6ZN11 406 aa12.69□□□□□ -0.38
CDH1-204ENST00000562118 GPRIN3Q6ZVF9 776 aa12.69□□□□□ -0.38
CDH1-204ENST00000562118 ZCCHC7Q8N3Z6 543 aaKnown RBP12.69□□□□□ -0.38
CDH1-204ENST00000562118 RNF175Q8N4F7 328 aa12.69□□□□□ -0.38
CDH1-204ENST00000562118 SRFBP1Q8NEF9 429 aaKnown RBP12.69□□□□□ -0.38
CDH1-204ENST00000562118 ZCCHC10Q8TBK6 192 aa12.69□□□□□ -0.38
CDH1-204ENST00000562118 TTC9Q92623 222 aa12.69□□□□□ -0.38
CDH1-204ENST00000562118 C11orf24Q96F05 449 aaPredicted RBP12.69□□□□□ -0.38
CDH1-204ENST00000562118 CNDP1Q96KN2 507 aa12.69□□□□□ -0.38
CDH1-204ENST00000562118 CATSPER2Q96P56 530 aa12.69□□□□□ -0.38
CDH1-204ENST00000562118 KCNC2Q96PR1 638 aa12.69□□□□□ -0.38
CDH1-204ENST00000562118 TBCDQ9BTW9 1192 aa12.69□□□□□ -0.38
CDH1-204ENST00000562118 MECRQ9BV79 373 aa12.69□□□□□ -0.38
CDH1-204ENST00000562118 TNFRSF12AQ9NP84 129 aa12.69□□□□□ -0.38
CDH1-204ENST00000562118 ACSS2Q9NR19 701 aa12.69□□□□□ -0.38
CDH1-204ENST00000562118 ZNF446Q9NWS9 450 aa12.69□□□□□ -0.38
CDH1-204ENST00000562118 ZFYVE26Q68DK2 2539 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms