RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 SLC5A2P31639 672 aa21.4■■□□□ 1.02
SYNGR3-202ENST00000562045 MLLT3P42568 568 aaPredicted RBP21.4■■□□□ 1.02
SYNGR3-202ENST00000562045 SCTRP47872 440 aa21.4■■□□□ 1.02
SYNGR3-202ENST00000562045 RPS13P62277 151 aaKnown RBP21.4■■□□□ 1.02
SYNGR3-202ENST00000562045 BNIP1Q12981 228 aa21.4■■□□□ 1.02
SYNGR3-202ENST00000562045 KLF10Q13118 480 aa21.4■■□□□ 1.02
SYNGR3-202ENST00000562045 IGF2-ASQ6U949 168 aa21.4■■□□□ 1.02
SYNGR3-202ENST00000562045 TREML1Q86YW5 311 aa21.4■■□□□ 1.02
SYNGR3-202ENST00000562045 ANKRD53Q8N9V6 530 aa21.4■■□□□ 1.02
SYNGR3-202ENST00000562045 ZNF501Q96CX3 271 aaPredicted RBP21.4■■□□□ 1.02
SYNGR3-202ENST00000562045 C1orf50Q9BV19 199 aa21.4■■□□□ 1.02
SYNGR3-202ENST00000562045 PDE7BQ9NP56 450 aa21.4■■□□□ 1.02
SYNGR3-202ENST00000562045 FGF21Q9NSA1 209 aa21.4■■□□□ 1.02
SYNGR3-202ENST00000562045 AIG1Q9NVV5 245 aa21.4■■□□□ 1.02
SYNGR3-202ENST00000562045 KLK4Q9Y5K2 254 aa21.4■■□□□ 1.02
SYNGR3-202ENST00000562045 CTSVO60911 334 aa21.39■■□□□ 1.01
SYNGR3-202ENST00000562045 RBMS1P29558 406 aaKnown RBP21.39■■□□□ 1.01
SYNGR3-202ENST00000562045 DIO3P55073 304 aa21.39■■□□□ 1.01
SYNGR3-202ENST00000562045 FOXK2Q01167 660 aa21.39■■□□□ 1.01
SYNGR3-202ENST00000562045 RPS6KA2Q15349 733 aa21.39■■□□□ 1.01
SYNGR3-202ENST00000562045 PRAMEF17Q5VTA0 474 aa21.39■■□□□ 1.01
SYNGR3-202ENST00000562045 PAQR7Q86WK9 346 aa21.39■■□□□ 1.01
SYNGR3-202ENST00000562045 ZUFSPQ96AP4 578 aa21.39■■□□□ 1.01
SYNGR3-202ENST00000562045 TAAR9Q96RI9 348 aa21.39■■□□□ 1.01
SYNGR3-202ENST00000562045 EIF3LQ9Y262 564 aaKnown RBP21.39■■□□□ 1.01
SYNGR3-202ENST00000562045 OR2A25A4D2G3 310 aa21.38■■□□□ 1.01
SYNGR3-202ENST00000562045 HAT1O14929 419 aa21.38■■□□□ 1.01
SYNGR3-202ENST00000562045 TLX3O43711 291 aaPredicted RBP21.38■■□□□ 1.01
SYNGR3-202ENST00000562045 ZNF28P17035 718 aa21.38■■□□□ 1.01
SYNGR3-202ENST00000562045 MRPL19P49406 292 aaKnown RBP21.38■■□□□ 1.01
SYNGR3-202ENST00000562045 KIAA0040Q15053 153 aa21.38■■□□□ 1.01
SYNGR3-202ENST00000562045 VN1R5Q7Z5H4 357 aa21.38■■□□□ 1.01
SYNGR3-202ENST00000562045 MIER2Q8N344 545 aa21.38■■□□□ 1.01
SYNGR3-202ENST00000562045 DNAJC22Q8N4W6 341 aa21.38■■□□□ 1.01
SYNGR3-202ENST00000562045 TCTN2Q96GX1 697 aa21.38■■□□□ 1.01
SYNGR3-202ENST00000562045 SERPINI1Q99574 410 aa21.38■■□□□ 1.01
SYNGR3-202ENST00000562045 BRINP2Q9C0B6 783 aa21.38■■□□□ 1.01
SYNGR3-202ENST00000562045 SDR39U1Q9NRG7 319 aaPredicted RBP21.38■■□□□ 1.01
SYNGR3-202ENST00000562045 ASIC5Q9NY37 505 aa21.38■■□□□ 1.01
SYNGR3-202ENST00000562045 GPR45Q9Y5Y3 372 aa21.38■■□□□ 1.01
SYNGR3-202ENST00000562045 POLR1CO15160 346 aaPredicted RBP21.38■■□□□ 1.01
SYNGR3-202ENST00000562045 ETHE1O95571 254 aa21.38■■□□□ 1.01
SYNGR3-202ENST00000562045 ACPPP15309 386 aa21.38■■□□□ 1.01
SYNGR3-202ENST00000562045 EZRP15311 586 aaKnown RBP21.38■■□□□ 1.01
SYNGR3-202ENST00000562045 PTX3P26022 381 aaPredicted RBP21.38■■□□□ 1.01
SYNGR3-202ENST00000562045 PIK3R1P27986 724 aa21.38■■□□□ 1.01
SYNGR3-202ENST00000562045 MAPK1P28482 360 aa21.38■■□□□ 1.01
SYNGR3-202ENST00000562045 AHRP35869 848 aa21.38■■□□□ 1.01
SYNGR3-202ENST00000562045 RPS15AP62244 130 aaKnown RBP21.38■■□□□ 1.01
SYNGR3-202ENST00000562045 TBC1D25Q3MII6 688 aa21.38■■□□□ 1.01
SYNGR3-202ENST00000562045 LACTB2Q53H82 288 aaPredicted RBP21.38■■□□□ 1.01
SYNGR3-202ENST00000562045 IL23RQ5VWK5 629 aa21.38■■□□□ 1.01
SYNGR3-202ENST00000562045 PLD3Q8IV08 490 aa21.38■■□□□ 1.01
SYNGR3-202ENST00000562045 OR1L3Q8NH93 324 aa21.38■■□□□ 1.01
SYNGR3-202ENST00000562045 CMTM5Q96DZ9 223 aa21.38■■□□□ 1.01
SYNGR3-202ENST00000562045 APIPQ96GX9 242 aa21.38■■□□□ 1.01
SYNGR3-202ENST00000562045 NSL1Q96IY1 281 aa21.38■■□□□ 1.01
SYNGR3-202ENST00000562045 CCDC86Q9H6F5 360 aaKnown RBP21.38■■□□□ 1.01
SYNGR3-202ENST00000562045 TXLNGQ9NUQ3 528 aa21.38■■□□□ 1.01
SYNGR3-202ENST00000562045 ARL8BQ9NVJ2 186 aa21.38■■□□□ 1.01
SYNGR3-202ENST00000562045 POLR3HQ9Y535 204 aaPredicted RBP21.38■■□□□ 1.01
SYNGR3-202ENST00000562045 APC2O95996 2303 aa21.37■■□□□ 1.01
SYNGR3-202ENST00000562045 CFAP47Q6ZTR5 3102 aa21.37■■□□□ 1.01
SYNGR3-202ENST00000562045 PSMD12O00232 456 aaPredicted RBP21.37■■□□□ 1.01
SYNGR3-202ENST00000562045 LCMT2O60294 686 aaKnown RBP21.37■■□□□ 1.01
SYNGR3-202ENST00000562045 ATP5HO75947 161 aa21.37■■□□□ 1.01
SYNGR3-202ENST00000562045 CBX6O95503 412 aa21.37■■□□□ 1.01
SYNGR3-202ENST00000562045 TGFB1P01137 390 aa21.37■■□□□ 1.01
SYNGR3-202ENST00000562045 PCSK2P16519 638 aa21.37■■□□□ 1.01
SYNGR3-202ENST00000562045 PRDX6P30041 224 aa21.37■■□□□ 1.01
SYNGR3-202ENST00000562045 BCL6P41182 706 aa21.37■■□□□ 1.01
SYNGR3-202ENST00000562045 ACSM2AQ08AH3 577 aa21.37■■□□□ 1.01
SYNGR3-202ENST00000562045 CUL3Q13618 768 aa21.37■■□□□ 1.01
SYNGR3-202ENST00000562045 SPIN4Q56A73 249 aa21.37■■□□□ 1.01
SYNGR3-202ENST00000562045 DCAF12Q5T6F0 453 aa21.37■■□□□ 1.01
SYNGR3-202ENST00000562045 ACSM2BQ68CK6 577 aa21.37■■□□□ 1.01
SYNGR3-202ENST00000562045 DDA1Q9BW61 102 aa21.37■■□□□ 1.01
SYNGR3-202ENST00000562045 TAGLN3Q9UI15 199 aa21.37■■□□□ 1.01
SYNGR3-202ENST00000562045 PCDHGA3Q9Y5H0 932 aa21.37■■□□□ 1.01
SYNGR3-202ENST00000562045 TMEM150CB9EJG8 249 aa21.36■■□□□ 1.01
SYNGR3-202ENST00000562045 H3BMH7 237 aa21.36■■□□□ 1.01
SYNGR3-202ENST00000562045 TAF4O00268 1085 aa21.36■■□□□ 1.01
SYNGR3-202ENST00000562045 NVLO15381 856 aaKnown RBP21.36■■□□□ 1.01
SYNGR3-202ENST00000562045 CLEC3AO75596 197 aa21.36■■□□□ 1.01
SYNGR3-202ENST00000562045 UNC5CO95185 931 aa21.36■■□□□ 1.01
SYNGR3-202ENST00000562045 FGF5P12034 268 aa21.36■■□□□ 1.01
SYNGR3-202ENST00000562045 CALB2P22676 271 aa21.36■■□□□ 1.01
SYNGR3-202ENST00000562045 CYP4F2P78329 520 aa21.36■■□□□ 1.01
SYNGR3-202ENST00000562045 ACY1Q03154 408 aa21.36■■□□□ 1.01
SYNGR3-202ENST00000562045 RELAQ04206 551 aa21.36■■□□□ 1.01
SYNGR3-202ENST00000562045 PDCD4Q53EL6 469 aaKnown RBP21.36■■□□□ 1.01
SYNGR3-202ENST00000562045 TMTC4Q5T4D3 741 aa21.36■■□□□ 1.01
SYNGR3-202ENST00000562045 PWWP2BQ6NUJ5 590 aa21.36■■□□□ 1.01
SYNGR3-202ENST00000562045 FBXO42Q6P3S6 717 aa21.36■■□□□ 1.01
SYNGR3-202ENST00000562045 TRPV3Q8NET8 790 aa21.36■■□□□ 1.01
SYNGR3-202ENST00000562045 PILRAQ9UKJ1 303 aa21.36■■□□□ 1.01
SYNGR3-202ENST00000562045 PCDHGA7Q9Y5G6 932 aa21.36■■□□□ 1.01
SYNGR3-202ENST00000562045 AP1M2Q9Y6Q5 423 aa21.36■■□□□ 1.01
SYNGR3-202ENST00000562045 TEX51A0A1B0GUA7 166 aa21.35■■□□□ 1.01
SYNGR3-202ENST00000562045 HNRNPCL1O60812 293 aaKnown RBP21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms