RNA–Protein interactions for RNA: ENST00000562038.1

LINC01963-201, Transcript of long intergenic non-protein coding RNA 1963, humanhuman

BASIC

Gene LINC01963, Length 3,148 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01963-201ENST00000562038 PCDHGA11Q9Y5H2 935 aa5.37□□□□□ -1.55
LINC01963-201ENST00000562038 ARID1BQ8NFD5 2236 aaPredicted RBP5.36□□□□□ -1.55
LINC01963-201ENST00000562038 ARHGEF17Q96PE2 2063 aaPredicted RBP5.36□□□□□ -1.55
LINC01963-201ENST00000562038 IGKV1-8A0A0C4DH67 115 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 A0A0U1RQS6 177 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 ZNF891A8MT65 544 aaPredicted RBP5.36□□□□□ -1.55
LINC01963-201ENST00000562038 G3V2L1 256 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 GIPC1O14908 333 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 RSL1D1O76021 490 aaKnown RBP5.36□□□□□ -1.55
LINC01963-201ENST00000562038 SLC16A8O95907 504 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 FGF3P11487 239 aaPredicted RBP5.36□□□□□ -1.55
LINC01963-201ENST00000562038 TFEBP19484 476 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 BDKRB1P46663 353 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 RGS1Q08116 209 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 TBL3Q12788 808 aaKnown RBP5.36□□□□□ -1.55
LINC01963-201ENST00000562038 ZNF678Q5SXM1 525 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 C6orf15Q6UXA7 325 aaPredicted RBP5.36□□□□□ -1.55
LINC01963-201ENST00000562038 SPNS3Q6ZMD2 512 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 QSOX2Q6ZRP7 698 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 FRMD7Q6ZUT3 714 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 ABHD13Q7L211 337 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 UNC5BQ8IZJ1 945 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 NLGN4XQ8N0W4 816 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 LRRN4CLQ8ND94 238 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 NLGN4YQ8NFZ3 816 aaPredicted RBP5.36□□□□□ -1.55
LINC01963-201ENST00000562038 C11orf24Q96F05 449 aaPredicted RBP5.36□□□□□ -1.55
LINC01963-201ENST00000562038 GBP5Q96PP8 586 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 NUDT22Q9BRQ3 303 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 TBC1D10AQ9BXI6 508 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 TRIM45Q9H8W5 580 aaPredicted RBP5.36□□□□□ -1.55
LINC01963-201ENST00000562038 EML4Q9HC35 981 aaKnown RBP5.36□□□□□ -1.55
LINC01963-201ENST00000562038 CRLF2Q9HC73 371 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 PPANQ9NQ55 473 aaKnown RBP5.36□□□□□ -1.55
LINC01963-201ENST00000562038 QPCTLQ9NXS2 382 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 ARL15Q9NXU5 204 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 C5AR2Q9P296 337 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 EMCNQ9ULC0 261 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 PCDHGB6Q9Y5F9 930 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 SPAARA0A1B0GVQ0 90 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 NPEPPSL1A6NEC2 478 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 OR52A4PA6NMU1 304 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 C9orf172C9J069 976 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 TOP3BO95985 862 aaKnown RBP5.36□□□□□ -1.55
LINC01963-201ENST00000562038 ALOX15P16050 662 aaPredicted RBP5.36□□□□□ -1.55
LINC01963-201ENST00000562038 TMEM11P17152 192 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 EPORP19235 508 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 LCN1P31025 176 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 MAPK10P53779 464 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 TMPRSS3P57727 454 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 LCP2Q13094 533 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 C16orf72Q14CZ0 275 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 SEPT7Q16181 437 aaKnown RBP5.36□□□□□ -1.55
LINC01963-201ENST00000562038 PHKG1Q16816 387 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 TMEM81Q6P7N7 255 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 ISLR2Q6UXK2 745 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 MSANTD1Q6ZTZ1 278 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 RD3Q7Z3Z2 195 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 TMPRSS9Q7Z410 1059 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 ASPGQ86U10 573 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 MCATQ8IVS2 390 aaKnown RBP5.36□□□□□ -1.55
LINC01963-201ENST00000562038 CCDC116Q8IYX3 515 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 Q8NFD4 153 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 OR2I1PQ8NGU4 316 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 OR8K3Q8NH51 312 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 ADAMTS17Q8TE56 1095 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 STARD8Q92502 1023 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 MTERF3Q96E29 417 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 CMTM7Q96FZ5 175 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 PWWP2AQ96N64 755 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 TMEM237Q96Q45 408 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 TRIM55Q9BYV6 548 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 EHD3Q9NZN3 535 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 OPTCQ9UBM4 332 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 MOSPD1Q9UJG1 213 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 DMDP11532 3685 aa5.36□□□□□ -1.55
LINC01963-201ENST00000562038 A0A1W2PNU3 283 aaPredicted RBP5.35□□□□□ -1.55
LINC01963-201ENST00000562038 CPED1A4D0V7 1026 aa5.35□□□□□ -1.55
LINC01963-201ENST00000562038 GUCY1B2O75343 617 aa5.35□□□□□ -1.55
LINC01963-201ENST00000562038 ACSL3O95573 720 aa5.35□□□□□ -1.55
LINC01963-201ENST00000562038 CAPN1P07384 714 aa5.35□□□□□ -1.55
LINC01963-201ENST00000562038 AGXTP21549 392 aa5.35□□□□□ -1.55
LINC01963-201ENST00000562038 RPL3P39023 403 aaKnown RBP5.35□□□□□ -1.55
LINC01963-201ENST00000562038 AGTR2P50052 363 aa5.35□□□□□ -1.55
LINC01963-201ENST00000562038 HNRNPH2P55795 449 aaKnown RBP5.35□□□□□ -1.55
LINC01963-201ENST00000562038 TRAF3Q13114 568 aa5.35□□□□□ -1.55
LINC01963-201ENST00000562038 TARDBPQ13148 414 aaKnown RBP eCLIP5.35□□□□□ -1.55
LINC01963-201ENST00000562038 TUBB3Q13509 450 aa5.35□□□□□ -1.55
LINC01963-201ENST00000562038 TSNQ15631 228 aaKnown RBP5.35□□□□□ -1.55
LINC01963-201ENST00000562038 ZNF542PQ5EBM4 170 aa5.35□□□□□ -1.55
LINC01963-201ENST00000562038 FAM205BPQ63HN1 556 aa5.35□□□□□ -1.55
LINC01963-201ENST00000562038 KANK2Q63ZY3 851 aa5.35□□□□□ -1.55
LINC01963-201ENST00000562038 TMEM205Q6UW68 189 aa5.35□□□□□ -1.55
LINC01963-201ENST00000562038 FAM198BQ6UWH4 519 aa5.35□□□□□ -1.55
LINC01963-201ENST00000562038 CAMKMTQ7Z624 323 aa5.35□□□□□ -1.55
LINC01963-201ENST00000562038 RAB43Q86YS6 212 aa5.35□□□□□ -1.55
LINC01963-201ENST00000562038 CTAGE3PQ8IX95 158 aa5.35□□□□□ -1.55
LINC01963-201ENST00000562038 ZNF619Q8N2I2 560 aa5.35□□□□□ -1.55
LINC01963-201ENST00000562038 LILRA3Q8N6C8 439 aaPredicted RBP5.35□□□□□ -1.55
LINC01963-201ENST00000562038 C17orf47Q8NEP4 570 aa5.35□□□□□ -1.55
LINC01963-201ENST00000562038 OR4K3Q96R72 315 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms