RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 WDR20Q8TBZ3 569 aa13.42□□□□□ -0.26
VPS9D1-202ENST00000561976 TP53INP1Q96A56 240 aa13.42□□□□□ -0.26
VPS9D1-202ENST00000561976 ALG14Q96F25 216 aa13.42□□□□□ -0.26
VPS9D1-202ENST00000561976 VPS35Q96QK1 796 aa13.42□□□□□ -0.26
VPS9D1-202ENST00000561976 OR2A14Q96R47 310 aa13.42□□□□□ -0.26
VPS9D1-202ENST00000561976 WDR70Q9NW82 654 aa13.42□□□□□ -0.26
VPS9D1-202ENST00000561976 CD84Q9UIB8 345 aa13.42□□□□□ -0.26
VPS9D1-202ENST00000561976 PCDHB7Q9Y5E2 793 aa13.42□□□□□ -0.26
VPS9D1-202ENST00000561976 AGAP14A8MT82 685 aa13.42□□□□□ -0.26
VPS9D1-202ENST00000561976 H3BM21 787 aa13.42□□□□□ -0.26
VPS9D1-202ENST00000561976 TFECO14948 347 aaPredicted RBP13.42□□□□□ -0.26
VPS9D1-202ENST00000561976 HOXC11O43248 304 aaPredicted RBP13.42□□□□□ -0.26
VPS9D1-202ENST00000561976 ETHE1O95571 254 aa13.42□□□□□ -0.26
VPS9D1-202ENST00000561976 ADRA2AP08913 450 aa13.42□□□□□ -0.26
VPS9D1-202ENST00000561976 HMGA1P17096 107 aaKnown RBP13.42□□□□□ -0.26
VPS9D1-202ENST00000561976 IDSP22304 550 aa13.42□□□□□ -0.26
VPS9D1-202ENST00000561976 MAPK8P45983 427 aa13.42□□□□□ -0.26
VPS9D1-202ENST00000561976 AP1S2P56377 157 aa13.42□□□□□ -0.26
VPS9D1-202ENST00000561976 DAB2P98082 770 aa13.42□□□□□ -0.26
VPS9D1-202ENST00000561976 ELAVL2Q12926 359 aaKnown RBP13.42□□□□□ -0.26
VPS9D1-202ENST00000561976 TRIM60Q495X7 471 aa13.42□□□□□ -0.26
VPS9D1-202ENST00000561976 GCNT6Q5T4J0 391 aa13.42□□□□□ -0.26
VPS9D1-202ENST00000561976 THOC6Q86W42 341 aaKnown RBP13.42□□□□□ -0.26
VPS9D1-202ENST00000561976 ATCAYQ86WG3 371 aa13.42□□□□□ -0.26
VPS9D1-202ENST00000561976 KRT73Q86Y46 540 aa13.42□□□□□ -0.26
VPS9D1-202ENST00000561976 ASCC1Q8N9N2 400 aaKnown RBP13.42□□□□□ -0.26
VPS9D1-202ENST00000561976 VANGL1Q8TAA9 524 aaPredicted RBP13.42□□□□□ -0.26
VPS9D1-202ENST00000561976 CDCA4Q9BXL8 241 aa13.42□□□□□ -0.26
VPS9D1-202ENST00000561976 SPATA6Q9NWH7 488 aaPredicted RBP13.42□□□□□ -0.26
VPS9D1-202ENST00000561976 HCN4Q9Y3Q4 1203 aa13.42□□□□□ -0.26
VPS9D1-202ENST00000561976 GRIP1Q9Y3R0 1128 aa13.42□□□□□ -0.26
VPS9D1-202ENST00000561976 AP1M2Q9Y6Q5 423 aa13.42□□□□□ -0.26
VPS9D1-202ENST00000561976 GLTPD2A6NH11 291 aa13.41□□□□□ -0.26
VPS9D1-202ENST00000561976 CAPN5O15484 640 aaPredicted RBP13.41□□□□□ -0.26
VPS9D1-202ENST00000561976 GUCY1B2O75343 617 aa13.41□□□□□ -0.26
VPS9D1-202ENST00000561976 GADD45GO95257 159 aa13.41□□□□□ -0.26
VPS9D1-202ENST00000561976 MPC1LP0DKB6 136 aa13.41□□□□□ -0.26
VPS9D1-202ENST00000561976 CTGFP29279 349 aa13.41□□□□□ -0.26
VPS9D1-202ENST00000561976 HNF4AP41235 474 aa13.41□□□□□ -0.26
VPS9D1-202ENST00000561976 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.41□□□□□ -0.26
VPS9D1-202ENST00000561976 SSX1Q16384 188 aa13.41□□□□□ -0.26
VPS9D1-202ENST00000561976 LRRC73Q5JTD7 316 aa13.41□□□□□ -0.26
VPS9D1-202ENST00000561976 PLAG1Q6DJT9 500 aa13.41□□□□□ -0.26
VPS9D1-202ENST00000561976 TPRG1Q6ZUI0 275 aa13.41□□□□□ -0.26
VPS9D1-202ENST00000561976 SLC44A2Q8IWA5 706 aaPredicted RBP13.41□□□□□ -0.26
VPS9D1-202ENST00000561976 AQP11Q8NBQ7 271 aa13.41□□□□□ -0.26
VPS9D1-202ENST00000561976 GPR151Q8TDV0 419 aa13.41□□□□□ -0.26
VPS9D1-202ENST00000561976 SNX18Q96RF0 628 aa13.41□□□□□ -0.26
VPS9D1-202ENST00000561976 IL4I1Q96RQ9 567 aa13.41□□□□□ -0.26
VPS9D1-202ENST00000561976 C19orf43Q9BQ61 176 aa13.41□□□□□ -0.26
VPS9D1-202ENST00000561976 SLC35A5Q9BS91 424 aa13.41□□□□□ -0.26
VPS9D1-202ENST00000561976 TBC1D14Q9P2M4 693 aa13.41□□□□□ -0.26
VPS9D1-202ENST00000561976 RHCGQ9UBD6 479 aa13.41□□□□□ -0.26
VPS9D1-202ENST00000561976 A0A075B6Q4 140 aa13.41□□□□□ -0.26
VPS9D1-202ENST00000561976 GFYI3L273 518 aa13.41□□□□□ -0.26
VPS9D1-202ENST00000561976 CKMT1AP12532 417 aa13.41□□□□□ -0.26
VPS9D1-202ENST00000561976 CNR2P34972 360 aa13.41□□□□□ -0.26
VPS9D1-202ENST00000561976 RPS19P39019 145 aaKnown RBP13.41□□□□□ -0.26
VPS9D1-202ENST00000561976 RACK1P63244 317 aaKnown RBP13.41□□□□□ -0.26
VPS9D1-202ENST00000561976 RAE1P78406 368 aaKnown RBP13.41□□□□□ -0.26
VPS9D1-202ENST00000561976 SP140Q13342 867 aa13.41□□□□□ -0.26
VPS9D1-202ENST00000561976 NAE1Q13564 534 aa13.41□□□□□ -0.26
VPS9D1-202ENST00000561976 TAB1Q15750 504 aa13.41□□□□□ -0.26
VPS9D1-202ENST00000561976 ZMAT1Q5H9K5 638 aa13.41□□□□□ -0.26
VPS9D1-202ENST00000561976 TOR1AIP1Q5JTV8 583 aa13.41□□□□□ -0.26
VPS9D1-202ENST00000561976 TMPRSS11AQ6ZMR5 421 aa13.41□□□□□ -0.26
VPS9D1-202ENST00000561976 TAGAPQ8N103 731 aa13.41□□□□□ -0.26
VPS9D1-202ENST00000561976 PHOX2BQ99453 314 aa13.41□□□□□ -0.26
VPS9D1-202ENST00000561976 BRD9Q9H8M2 597 aa13.41□□□□□ -0.26
VPS9D1-202ENST00000561976 SNTG1Q9NSN8 517 aa13.41□□□□□ -0.26
VPS9D1-202ENST00000561976 MUTYHQ9UIF7 546 aa13.41□□□□□ -0.26
VPS9D1-202ENST00000561976 SH3D21A4FU49 640 aa13.4□□□□□ -0.26
VPS9D1-202ENST00000561976 PRAMEF25A6NGN4 478 aa13.4□□□□□ -0.26
VPS9D1-202ENST00000561976 ATP1B2P14415 290 aaPredicted RBP13.4□□□□□ -0.26
VPS9D1-202ENST00000561976 SOX3P41225 446 aa13.4□□□□□ -0.26
VPS9D1-202ENST00000561976 PTSQ03393 145 aa13.4□□□□□ -0.26
VPS9D1-202ENST00000561976 GPR50Q13585 617 aa13.4□□□□□ -0.26
VPS9D1-202ENST00000561976 TBRG1Q3YBR2 411 aa13.4□□□□□ -0.26
VPS9D1-202ENST00000561976 USP45Q70EL2 814 aa13.4□□□□□ -0.26
VPS9D1-202ENST00000561976 GALNT12Q8IXK2 581 aa13.4□□□□□ -0.26
VPS9D1-202ENST00000561976 SETD6Q8TBK2 473 aa13.4□□□□□ -0.26
VPS9D1-202ENST00000561976 CLP1Q92989 425 aaKnown RBP13.4□□□□□ -0.26
VPS9D1-202ENST00000561976 PIP5K1AQ99755 562 aa13.4□□□□□ -0.26
VPS9D1-202ENST00000561976 MAPKAP1Q9BPZ7 522 aa13.4□□□□□ -0.26
VPS9D1-202ENST00000561976 C3orf14Q9HBI5 128 aa13.4□□□□□ -0.26
VPS9D1-202ENST00000561976 CNOT2Q9NZN8 540 aaKnown RBP13.4□□□□□ -0.26
VPS9D1-202ENST00000561976 ACSL6Q9UKU0 697 aa13.4□□□□□ -0.26
VPS9D1-202ENST00000561976 TRAPPC4Q9Y296 219 aa13.4□□□□□ -0.26
VPS9D1-202ENST00000561976 BOLA1Q9Y3E2 137 aa13.4□□□□□ -0.26
VPS9D1-202ENST00000561976 MAP4K5Q9Y4K4 846 aa13.4□□□□□ -0.26
VPS9D1-202ENST00000561976 SLC16A5O15375 505 aa13.4□□□□□ -0.26
VPS9D1-202ENST00000561976 UGDHO60701 494 aa13.4□□□□□ -0.26
VPS9D1-202ENST00000561976 C6orf47O95873 294 aa13.4□□□□□ -0.26
VPS9D1-202ENST00000561976 PTPN5P54829 565 aa13.4□□□□□ -0.26
VPS9D1-202ENST00000561976 C21orf58P58505 322 aa13.4□□□□□ -0.26
VPS9D1-202ENST00000561976 HBA1P69905 142 aa13.4□□□□□ -0.26
VPS9D1-202ENST00000561976 RUNX1T1Q06455 604 aa13.4□□□□□ -0.26
VPS9D1-202ENST00000561976 PLEKHS1Q5SXH7 462 aa13.4□□□□□ -0.26
VPS9D1-202ENST00000561976 SLC34A3Q8N130 599 aa13.4□□□□□ -0.26
VPS9D1-202ENST00000561976 OR5AK3PQ8NH89 298 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms