RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 SLCO4C1Q6ZQN7 724 aa9.67□□□□□ -0.86
CLK3-205ENST00000561673 KLHDC8AQ8IYD2 350 aa9.67□□□□□ -0.86
CLK3-205ENST00000561673 TSPAN17Q96FV3 270 aa9.67□□□□□ -0.86
CLK3-205ENST00000561673 ZNF354BQ96LW1 612 aa9.67□□□□□ -0.86
CLK3-205ENST00000561673 GPR22Q99680 433 aa9.67□□□□□ -0.86
CLK3-205ENST00000561673 RBBP8Q99708 897 aa9.67□□□□□ -0.86
CLK3-205ENST00000561673 NPAS2Q99743 824 aa9.67□□□□□ -0.86
CLK3-205ENST00000561673 KCNK13Q9HB14 408 aa9.67□□□□□ -0.86
CLK3-205ENST00000561673 MMP25Q9NPA2 562 aa9.67□□□□□ -0.86
CLK3-205ENST00000561673 TXNDC16Q9P2K2 825 aa9.67□□□□□ -0.86
CLK3-205ENST00000561673 UTP11Q9Y3A2 253 aaKnown RBP9.67□□□□□ -0.86
CLK3-205ENST00000561673 CNTRLQ7Z7A1 2325 aa9.67□□□□□ -0.86
CLK3-205ENST00000561673 SCN3AQ9NY46 2000 aa9.66□□□□□ -0.86
CLK3-205ENST00000561673 LRIT2A6NDA9 550 aa9.66□□□□□ -0.86
CLK3-205ENST00000561673 FAM155BO75949 473 aa9.66□□□□□ -0.86
CLK3-205ENST00000561673 RASAL1O95294 804 aa9.66□□□□□ -0.86
CLK3-205ENST00000561673 GSTA2P09210 222 aa9.66□□□□□ -0.86
CLK3-205ENST00000561673 MYBL2P10244 700 aa9.66□□□□□ -0.86
CLK3-205ENST00000561673 CD1DP15813 335 aa9.66□□□□□ -0.86
CLK3-205ENST00000561673 STMN1P16949 149 aa9.66□□□□□ -0.86
CLK3-205ENST00000561673 JAK1P23458 1154 aa9.66□□□□□ -0.86
CLK3-205ENST00000561673 GGT5P36269 586 aa9.66□□□□□ -0.86
CLK3-205ENST00000561673 GMPRP36959 345 aa9.66□□□□□ -0.86
CLK3-205ENST00000561673 GP5P40197 560 aa9.66□□□□□ -0.86
CLK3-205ENST00000561673 CD96P40200 585 aa9.66□□□□□ -0.86
CLK3-205ENST00000561673 KCNC1P48547 511 aa9.66□□□□□ -0.86
CLK3-205ENST00000561673 TDGF1P3P51864 188 aa9.66□□□□□ -0.86
CLK3-205ENST00000561673 KCNK10P57789 538 aa9.66□□□□□ -0.86
CLK3-205ENST00000561673 BTN3A2P78410 334 aa9.66□□□□□ -0.86
CLK3-205ENST00000561673 SRSF11Q05519 484 aaKnown RBP9.66□□□□□ -0.86
CLK3-205ENST00000561673 TUBA3CQ13748 450 aa9.66□□□□□ -0.86
CLK3-205ENST00000561673 INAQ16352 499 aa9.66□□□□□ -0.86
CLK3-205ENST00000561673 MEP1AQ16819 746 aa9.66□□□□□ -0.86
CLK3-205ENST00000561673 FBXO48Q5FWF7 155 aa9.66□□□□□ -0.86
CLK3-205ENST00000561673 TOR1AIP1Q5JTV8 583 aa9.66□□□□□ -0.86
CLK3-205ENST00000561673 TUBA3EQ6PEY2 450 aa9.66□□□□□ -0.86
CLK3-205ENST00000561673 TMIGD1Q6UXZ0 262 aa9.66□□□□□ -0.86
CLK3-205ENST00000561673 QSOX2Q6ZRP7 698 aa9.66□□□□□ -0.86
CLK3-205ENST00000561673 GPSM1Q86YR5 675 aa9.66□□□□□ -0.86
CLK3-205ENST00000561673 CRLF3Q8IUI8 442 aa9.66□□□□□ -0.86
CLK3-205ENST00000561673 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.66□□□□□ -0.86
CLK3-205ENST00000561673 BEST3Q8N1M1 668 aa9.66□□□□□ -0.86
CLK3-205ENST00000561673 SUN3Q8TAQ9 357 aa9.66□□□□□ -0.86
CLK3-205ENST00000561673 FBXO25Q8TCJ0 367 aa9.66□□□□□ -0.86
CLK3-205ENST00000561673 NR4A3Q92570 626 aa9.66□□□□□ -0.86
CLK3-205ENST00000561673 ESAMQ96AP7 390 aa9.66□□□□□ -0.86
CLK3-205ENST00000561673 UBXN10Q96LJ8 280 aa9.66□□□□□ -0.86
CLK3-205ENST00000561673 PTCHD1Q96NR3 888 aa9.66□□□□□ -0.86
CLK3-205ENST00000561673 SIGLEC12Q96PQ1 595 aa9.66□□□□□ -0.86
CLK3-205ENST00000561673 LPAR4Q99677 370 aa9.66□□□□□ -0.86
CLK3-205ENST00000561673 TMEM79Q9BSE2 394 aa9.66□□□□□ -0.86
CLK3-205ENST00000561673 CAPS2Q9BXY5 557 aa9.66□□□□□ -0.86
CLK3-205ENST00000561673 RHBGQ9H310 441 aa9.66□□□□□ -0.86
CLK3-205ENST00000561673 CLK4Q9HAZ1 481 aaKnown RBP9.66□□□□□ -0.86
CLK3-205ENST00000561673 ANKRD10Q9NXR5 420 aa9.66□□□□□ -0.86
CLK3-205ENST00000561673 CENPEQ02224 2701 aa9.66□□□□□ -0.86
CLK3-205ENST00000561673 ICE1Q9Y2F5 2266 aa9.66□□□□□ -0.86
CLK3-205ENST00000561673 UNC79Q9P2D8 2635 aa9.66□□□□□ -0.86
CLK3-205ENST00000561673 HIVEP3Q5T1R4 2406 aa9.65□□□□□ -0.86
CLK3-205ENST00000561673 PSMD12O00232 456 aaPredicted RBP9.65□□□□□ -0.86
CLK3-205ENST00000561673 PRAMEF4O60810 478 aa9.65□□□□□ -0.86
CLK3-205ENST00000561673 WISP2O76076 250 aa9.65□□□□□ -0.86
CLK3-205ENST00000561673 TBX6O95947 436 aaPredicted RBP9.65□□□□□ -0.86
CLK3-205ENST00000561673 STSP08842 583 aa9.65□□□□□ -0.86
CLK3-205ENST00000561673 RNH1P13489 461 aaKnown RBP9.65□□□□□ -0.86
CLK3-205ENST00000561673 MAOAP21397 527 aa9.65□□□□□ -0.86
CLK3-205ENST00000561673 MST1P26927 711 aa9.65□□□□□ -0.86
CLK3-205ENST00000561673 COL8A1P27658 744 aa9.65□□□□□ -0.86
CLK3-205ENST00000561673 HNRNPH1P31943 449 aaKnown RBP9.65□□□□□ -0.86
CLK3-205ENST00000561673 SPRP35270 261 aaPredicted RBP9.65□□□□□ -0.86
CLK3-205ENST00000561673 MAGEA4P43358 317 aa9.65□□□□□ -0.86
CLK3-205ENST00000561673 HSPA7P48741 367 aa9.65□□□□□ -0.86
CLK3-205ENST00000561673 SLC26A5P58743 744 aa9.65□□□□□ -0.86
CLK3-205ENST00000561673 RAB10P61026 200 aa9.65□□□□□ -0.86
CLK3-205ENST00000561673 ATP6V0D1P61421 351 aa9.65□□□□□ -0.86
CLK3-205ENST00000561673 STXBP1P61764 594 aaKnown RBP9.65□□□□□ -0.86
CLK3-205ENST00000561673 CAV1Q03135 178 aa9.65□□□□□ -0.86
CLK3-205ENST00000561673 SLBPQ14493 270 aaKnown RBP eCLIP9.65□□□□□ -0.86
CLK3-205ENST00000561673 ZKSCAN8Q15776 578 aaPredicted RBP9.65□□□□□ -0.86
CLK3-205ENST00000561673 KBTBD12Q3ZCT8 623 aa9.65□□□□□ -0.86
CLK3-205ENST00000561673 ZNF766Q5HY98 468 aa9.65□□□□□ -0.86
CLK3-205ENST00000561673 CDKL4Q5MAI5 379 aa9.65□□□□□ -0.86
CLK3-205ENST00000561673 GRTP1Q5TC63 336 aa9.65□□□□□ -0.86
CLK3-205ENST00000561673 PRAMEF9Q5VWM5 478 aa9.65□□□□□ -0.86
CLK3-205ENST00000561673 SPINK14Q6IE38 97 aa9.65□□□□□ -0.86
CLK3-205ENST00000561673 SULT1C3Q6IMI6 304 aa9.65□□□□□ -0.86
CLK3-205ENST00000561673 ZDHHC24Q6UX98 284 aa9.65□□□□□ -0.86
CLK3-205ENST00000561673 MAMDC2Q7Z304 686 aaPredicted RBP9.65□□□□□ -0.86
CLK3-205ENST00000561673 ZNF572Q7Z3I7 529 aaPredicted RBP9.65□□□□□ -0.86
CLK3-205ENST00000561673 VN1R5Q7Z5H4 357 aa9.65□□□□□ -0.86
CLK3-205ENST00000561673 CCDC25Q86WR0 208 aa9.65□□□□□ -0.86
CLK3-205ENST00000561673 CTAGE3PQ8IX95 158 aa9.65□□□□□ -0.86
CLK3-205ENST00000561673 CYP4X1Q8N118 509 aa9.65□□□□□ -0.86
CLK3-205ENST00000561673 KRT78Q8N1N4 520 aa9.65□□□□□ -0.86
CLK3-205ENST00000561673 CA13Q8N1Q1 262 aa9.65□□□□□ -0.86
CLK3-205ENST00000561673 TCAIMQ8N3R3 496 aa9.65□□□□□ -0.86
CLK3-205ENST00000561673 KIF2BQ8N4N8 673 aa9.65□□□□□ -0.86
CLK3-205ENST00000561673 PPM1NQ8N819 430 aa9.65□□□□□ -0.86
CLK3-205ENST00000561673 ZNF454Q8N9F8 522 aa9.65□□□□□ -0.86
CLK3-205ENST00000561673 TTLQ8NG68 377 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms