RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 LSSP48449 732 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 PLA2G16P53816 162 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 ARF3P61204 181 aaPredicted RBP9.82□□□□□ -0.84
USP3-219ENST00000561326 SKP1P63208 163 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 DAB2P98082 770 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 SLC25A3Q00325 362 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 C2orf80Q0P641 193 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 SQSTM1Q13501 440 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 SLC9A5Q14940 896 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 HEPACAMQ14CZ8 416 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 ADPRMQ3LIE5 342 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 FAM174BQ3ZCQ3 159 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 GLIPR1L2Q4G1C9 344 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 PLA2G2CQ5R387 149 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 CPTPQ5TA50 214 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 NKAIN2Q5VXU1 208 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 REP15Q6BDI9 236 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 PRMT9Q6P2P2 845 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 MSANTD1Q6ZTZ1 278 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 RNF44Q7L0R7 432 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 ABHD13Q7L211 337 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 KMT5CQ86Y97 462 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 MCATQ8IVS2 390 aaKnown RBP9.82□□□□□ -0.84
USP3-219ENST00000561326 RIMKLAQ8IXN7 391 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 DEFB107AQ8IZN7 70 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 PGAM4Q8N0Y7 254 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 KRTCAP2Q8N6L1 136 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 CLHC1Q8NHS4 586 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 WDR48Q8TAF3 677 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 GAL3ST3Q96A11 431 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 CCDC74AQ96AQ1 378 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 VPS33AQ96AX1 596 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 MS4A6EQ96DS6 147 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 EGLN2Q96KS0 407 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 TMEM74Q96NL1 305 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 NPAS2Q99743 824 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 C17orf62Q9BQA9 187 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 THTPAQ9BU02 230 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 SLC6A16Q9GZN6 736 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 ACTL8Q9H568 366 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 REEP4Q9H6H4 257 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 WDR41Q9HAD4 459 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 C11orf16Q9NQ32 467 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 CROTQ9UKG9 612 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 PRPF19Q9UMS4 504 aaKnown RBP9.82□□□□□ -0.84
USP3-219ENST00000561326 PLCL2Q9UPR0 1127 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 VCANP13611 3396 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 ASCC3Q8N3C0 2202 aaKnown RBP9.82□□□□□ -0.84
USP3-219ENST00000561326 GABRR3A8MPY1 467 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 FBP2O00757 339 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 SCAMP2O15127 329 aaKnown RBP9.81□□□□□ -0.84
USP3-219ENST00000561326 TOX3O15405 576 aaPredicted RBP9.81□□□□□ -0.84
USP3-219ENST00000561326 LRATO95237 230 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 KCNH1O95259 989 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 LDOC1O95751 146 aaPredicted RBP9.81□□□□□ -0.84
USP3-219ENST00000561326 TBX6O95947 436 aaPredicted RBP9.81□□□□□ -0.84
USP3-219ENST00000561326 C9P02748 559 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 GBAP04062 536 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 ZNF806P0C7X5 589 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 CKMT1AP12532 417 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 DRD2P14416 443 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 ITGAXP20702 1163 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 CAPN3P20807 821 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 HIST1H1TP22492 207 aaPredicted RBP9.81□□□□□ -0.84
USP3-219ENST00000561326 TPP2P29144 1249 aaPredicted RBP9.81□□□□□ -0.84
USP3-219ENST00000561326 MLLT3P42568 568 aaPredicted RBP9.81□□□□□ -0.84
USP3-219ENST00000561326 KIR3DL1P43629 444 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 DGKQP52824 942 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 TAS2R50P59544 299 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 PPP1CAP62136 330 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 BTN3A2P78410 334 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 HSD11B2P80365 405 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 FOXM1Q08050 763 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 HYAL2Q12891 473 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 SLAMF1Q13291 335 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 NFYCQ13952 458 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 TLR1Q15399 786 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 CCDC6Q16204 474 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 CLPPQ16740 277 aaPredicted RBP9.81□□□□□ -0.84
USP3-219ENST00000561326 NDUFA9Q16795 377 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 HKDC1Q2TB90 917 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 TIGD2Q4W5G0 525 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 TCTE1Q5JU00 501 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 C6orf163Q5TEZ5 329 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 ANXA8L1Q5VT79 327 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 NIPAL1Q6NVV3 410 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 ABHD17CQ6PCB6 329 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 USP53Q70EK8 1073 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 SPRED1Q7Z699 444 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 SCUBE1Q8IWY4 988 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 KIF2BQ8N4N8 673 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 DNAJC22Q8N4W6 341 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 DPP10Q8N608 796 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 CSNK1A1LQ8N752 337 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 OR8J2Q8NGG1 315 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 OR2I1PQ8NGU4 316 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 GFM2Q969S9 779 aaKnown RBP9.81□□□□□ -0.84
USP3-219ENST00000561326 LRRC58Q96CX6 371 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 COQ8BQ96D53 544 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 ITCHQ96J02 903 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms