RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 LAS2Q8IYD9 372 aa10.17□□□□□ -0.78
TPM1-229ENST00000561242 CLYBLQ8N0X4 340 aa10.17□□□□□ -0.78
TPM1-229ENST00000561242 ZNF740Q8NDX6 193 aa10.17□□□□□ -0.78
TPM1-229ENST00000561242 MZB1Q8WU39 189 aa10.17□□□□□ -0.78
TPM1-229ENST00000561242 APOBEC4Q8WW27 367 aaKnown RBP10.17□□□□□ -0.78
TPM1-229ENST00000561242 PMEPA1Q969W9 287 aa10.17□□□□□ -0.78
TPM1-229ENST00000561242 NACC2Q96BF6 587 aa10.17□□□□□ -0.78
TPM1-229ENST00000561242 TM4SF19Q96DZ7 209 aa10.17□□□□□ -0.78
TPM1-229ENST00000561242 ATP6V1G3Q96LB4 118 aa10.17□□□□□ -0.78
TPM1-229ENST00000561242 ZNF285Q96NJ3 590 aa10.17□□□□□ -0.78
TPM1-229ENST00000561242 GBP5Q96PP8 586 aa10.17□□□□□ -0.78
TPM1-229ENST00000561242 TMEM237Q96Q45 408 aa10.17□□□□□ -0.78
TPM1-229ENST00000561242 OR1F2PQ96R84 312 aa10.17□□□□□ -0.78
TPM1-229ENST00000561242 F2RL3Q96RI0 385 aa10.17□□□□□ -0.78
TPM1-229ENST00000561242 CCT7Q99832 543 aa10.17□□□□□ -0.78
TPM1-229ENST00000561242 C1QTNF3Q9BXJ4 246 aa10.17□□□□□ -0.78
TPM1-229ENST00000561242 SOX17Q9H6I2 414 aaPredicted RBP10.17□□□□□ -0.78
TPM1-229ENST00000561242 WDR54Q9H977 334 aa10.17□□□□□ -0.78
TPM1-229ENST00000561242 GIMAP4Q9NUV9 329 aa10.17□□□□□ -0.78
TPM1-229ENST00000561242 RIC8BQ9NVN3 520 aa10.17□□□□□ -0.78
TPM1-229ENST00000561242 LYARQ9NX58 379 aaKnown RBP10.17□□□□□ -0.78
TPM1-229ENST00000561242 PSD3Q9NYI0 1048 aa10.17□□□□□ -0.78
TPM1-229ENST00000561242 HCN3Q9P1Z3 774 aa10.17□□□□□ -0.78
TPM1-229ENST00000561242 C3orf18Q9UK00 162 aa10.17□□□□□ -0.78
TPM1-229ENST00000561242 PLXNB3Q9ULL4 1909 aa10.17□□□□□ -0.78
TPM1-229ENST00000561242 MYLKQ15746 1914 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 GNG14A0A1W2PPG7 69 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 TMEM120BA0PK00 339 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 LRIT2A6NDA9 550 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 LRRC14BA6NHZ5 514 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 FOXO6A8MYZ6 492 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 TMEM114B3SHH9 223 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 G3V2L1 256 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 SAP18O00422 153 aaKnown RBP10.16□□□□□ -0.78
TPM1-229ENST00000561242 ATP8B1O43520 1251 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 PRMT3O60678 531 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 B4GALT2O60909 372 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 RDH16O75452 317 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 IFNA16P05015 189 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 SERPINE1P05121 402 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 ALPPP05187 535 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 BPGMP07738 259 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 ZGLP1P0C6A0 271 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 MAPK1P28482 360 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 RORAP35398 523 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 XCR1P46094 333 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 SERPINB4P48594 390 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 CSRP3P50461 194 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 NEK2P51955 445 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 ARFIP1P53367 373 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 RPS13P62277 151 aaKnown RBP10.16□□□□□ -0.78
TPM1-229ENST00000561242 RHDQ02161 417 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 TLE3Q04726 772 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 BTKQ06187 659 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 PCDH1Q08174 1060 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 ACSM2AQ08AH3 577 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 CSTF3Q12996 717 aaKnown RBP10.16□□□□□ -0.78
TPM1-229ENST00000561242 BIKQ13323 160 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 CUL3Q13618 768 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 NSDHLQ15738 373 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 CHI3L2Q15782 390 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 DEFB109BQ30KR1 87 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 TUBB8Q3ZCM7 444 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 GGTA1PQ4G0N0 100 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 DEPDC1Q5TB30 811 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 ACSM2BQ68CK6 577 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 BORAQ6PGQ7 559 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 EFCAB3Q8N7B9 438 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 OR52B6Q8NGF0 335 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 OR2Y1Q8NGV0 311 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 STT3BQ8TCJ2 826 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 LRRC8CQ8TDW0 803 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 UTP15Q8TED0 518 aaKnown RBP10.16□□□□□ -0.78
TPM1-229ENST00000561242 TBC1D20Q96BZ9 403 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 PEX11GQ96HA9 241 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 SHCBP1LQ9BZQ2 653 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 OR51B5Q9H339 312 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 BRF2Q9HAW0 419 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 ATP13A2Q9NQ11 1180 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 ABI3Q9P2A4 366 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 SLC17A7Q9P2U7 560 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 VPS29Q9UBQ0 182 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 SH2B3Q9UQQ2 575 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 PCDHGA6Q9Y5G7 932 aa10.16□□□□□ -0.78
TPM1-229ENST00000561242 MAGEB17A8MXT2 336 aa10.15□□□□□ -0.78
TPM1-229ENST00000561242 MKRN2OSH3BPM6 223 aa10.15□□□□□ -0.78
TPM1-229ENST00000561242 K7ENP7 123 aa10.15□□□□□ -0.78
TPM1-229ENST00000561242 MANBAO00462 879 aa10.15□□□□□ -0.78
TPM1-229ENST00000561242 OR7A17O14581 309 aa10.15□□□□□ -0.78
TPM1-229ENST00000561242 AZIN1O14977 448 aa10.15□□□□□ -0.78
TPM1-229ENST00000561242 CHST10O43529 356 aa10.15□□□□□ -0.78
TPM1-229ENST00000561242 GALR3O60755 368 aaPredicted RBP10.15□□□□□ -0.78
TPM1-229ENST00000561242 CYC1P08574 325 aa10.15□□□□□ -0.78
TPM1-229ENST00000561242 C8orf89P0DMQ9 161 aa10.15□□□□□ -0.78
TPM1-229ENST00000561242 ACPPP15309 386 aa10.15□□□□□ -0.78
TPM1-229ENST00000561242 H2AFXP16104 143 aaPredicted RBP10.15□□□□□ -0.78
TPM1-229ENST00000561242 MAPK12P53778 367 aa10.15□□□□□ -0.78
TPM1-229ENST00000561242 CDC20Q12834 499 aa10.15□□□□□ -0.78
TPM1-229ENST00000561242 SLAMF1Q13291 335 aa10.15□□□□□ -0.78
TPM1-229ENST00000561242 UGT8Q16880 541 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms