RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 RNF123Q5XPI4 1314 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 A0A1B0GTL3 188 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 MYOCOSA0A1B0GUC4 107 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 METTL21EPA6NDL7 271 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 HEPACAM2A8MVW5 462 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 ANKRD66B4E2M5 251 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 WASH3PC4AMC7 463 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 POC1B-GALNT4F8VUJ3 575 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 GOLGA8TH3BQL2 631 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 H7C1Q1 480 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 SMIM22K7EJ46 135 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 PSMD11O00231 422 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 HIP1O00291 1037 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 CLDN5O00501 218 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 DNALI1O14645 258 aaPredicted RBP1.92□□□□□ -2.1
RTF1-207ENST00000561076 ABCD4O14678 606 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 ARPC2O15144 300 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 ALOX15BO15296 676 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 RNF113AO15541 343 aaKnown RBP1.92□□□□□ -2.1
RTF1-207ENST00000561076 SYT7O43581 403 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 KRT86O43790 486 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 LANCL1O43813 399 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 ECE2O60344 883 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 DFNA5O60443 496 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 ZIC3O60481 467 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 LDB3O75112 727 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 CRTAPO75718 401 aaPredicted RBP1.92□□□□□ -2.1
RTF1-207ENST00000561076 KRT33AO76009 404 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 DFFBO76075 338 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 MED26O95402 600 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 LDLRP01130 860 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 CHRM5P08912 532 aaPredicted RBP1.92□□□□□ -2.1
RTF1-207ENST00000561076 NUDT17P0C025 328 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 STAG3L2P0CL84 134 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 ERVK-10P10266 1014 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 MCF2P10911 925 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 HAPLN1P10915 354 aaPredicted RBP1.92□□□□□ -2.1
RTF1-207ENST00000561076 UQCRBP14927 111 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 ANPEPP15144 967 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 TSPAN8P19075 237 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 MSH3P20585 1137 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 COMTP21964 271 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 UGT1A1P22309 533 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 CBLP22681 906 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 CHMLP26374 656 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 TKTP29401 623 aaKnown RBP1.92□□□□□ -2.1
RTF1-207ENST00000561076 CDC25AP30304 524 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 HMOX2P30519 316 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 TNFSF8P32971 234 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 RFC2P35250 354 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 PTGER4P35408 488 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 FDFT1P37268 417 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 RPL3P39023 403 aaKnown RBP1.92□□□□□ -2.1
RTF1-207ENST00000561076 TMPOP42166 694 aaKnown RBP1.92□□□□□ -2.1
RTF1-207ENST00000561076 GRIA1P42261 906 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 GRIA3P42263 894 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 MATKP42679 507 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 TNFRSF4P43489 277 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 RPL21P46778 160 aaKnown RBP1.92□□□□□ -2.1
RTF1-207ENST00000561076 SOX2P48431 317 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 CXCR3P49682 368 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 CCL11P51671 97 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 SEC61A1P61619 476 aaKnown RBP1.92□□□□□ -2.1
RTF1-207ENST00000561076 HERVK_113P63132 956 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 ERVK-8P63133 956 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 BLOC1S1P78537 153 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 CDKL1Q00532 357 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 HSF1Q00613 529 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 CAP1Q01518 475 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 SRYQ05066 204 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 SPOCK1Q08629 439 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 PJVKQ0ZLH3 352 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 ST3GAL1Q11201 340 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 PPIL2Q13356 520 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 NFATC2Q13469 925 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 SELPLGQ14242 412 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 MLANAQ16655 118 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 ODF4Q2M2E3 257 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 FAM83EQ2M2I3 478 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 KLHL40Q2TBA0 621 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 DCAF4L1Q3SXM0 396 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 SLC9C1Q4G0N8 1177 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 TMEM35AQ53FP2 167 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 SYT14P1Q58G82 188 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 MIIPQ5JXC2 388 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 KIAA1755Q5JYT7 1200 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 C10orf120Q5SQS8 335 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 LYPLAL1Q5VWZ2 237 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 C18orf63Q68DL7 685 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 ASPHD2Q6ICH7 369 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 TYW3Q6IPR3 259 aaKnown RBP1.92□□□□□ -2.1
RTF1-207ENST00000561076 KIAA1161Q6NSJ0 714 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 SCYL2Q6P3W7 929 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 WASH2PQ6VEQ5 465 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 MON1BQ7L1V2 547 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 DGLUCYQ7Z3D6 616 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 RD3Q7Z3Z2 195 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 GRASPQ7Z6J2 395 aaPredicted RBP1.92□□□□□ -2.1
RTF1-207ENST00000561076 KIAA1328Q86T90 577 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 ACOT1Q86TX2 421 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms