RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 SSR3Q9UNL2 185 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 ITM2BQ9Y287 266 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 PTPRDP23468 1912 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 ZNF7P17097 686 aaPredicted RBP15.85■□□□□ 0.13
TPM1-228ENST00000560975 HLA-DMAP28067 261 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 MAPK1P28482 360 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 PXNP49023 591 aaPredicted RBP15.85■□□□□ 0.13
TPM1-228ENST00000560975 MAPKAPK2P49137 400 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 CAV3P56539 151 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 RPS24P62847 133 aaKnown RBP15.85■□□□□ 0.13
TPM1-228ENST00000560975 POU6F2P78424 691 aaPredicted RBP15.85■□□□□ 0.13
TPM1-228ENST00000560975 VEZF1Q14119 521 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 FAM205BPQ63HN1 556 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 FAAH2Q6GMR7 532 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 ALG1LQ6GMV1 187 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 C22orf42Q6IC83 251 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 IDO2Q6ZQW0 420 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 ZBTB2Q8N680 514 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 GPRC5AQ8NFJ5 357 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 CMTM7Q96FZ5 175 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 PCDH10Q9P2E7 1040 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 PCDHB9Q9Y5E1 797 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 PCDHB11Q9Y5F2 797 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 PCDHB1Q9Y5F3 818 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 LRRTM2O43300 516 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 PRAMEF1O95521 474 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 C1QBP02746 253 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 AMD1P17707 334 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 DDX5P17844 614 aaKnown RBP15.85■□□□□ 0.13
TPM1-228ENST00000560975 M6PRP20645 277 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 NUDT1P36639 197 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 CRATP43155 626 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 SELENOWP63302 87 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 UBE3AQ05086 875 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 LEXMQ3ZCV2 418 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 ZNF767PQ75MW2 155 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 AQP11Q8NBQ7 271 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 OR4C15Q8NGM1 316 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 LRRC20Q8TCA0 184 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 PIH1D2Q8WWB5 315 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 ADGRE3Q9BY15 652 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 ASB8Q9H765 288 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 SEC14L4Q9UDX3 406 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 KLHL21Q9UJP4 597 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 STUB1Q9UNE7 303 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 PRAMEF25A6NGN4 478 aa15.84■□□□□ 0.13
TPM1-228ENST00000560975 A8MX80 341 aa15.84■□□□□ 0.13
TPM1-228ENST00000560975 IGFBP1P08833 259 aaPredicted RBP15.84■□□□□ 0.13
TPM1-228ENST00000560975 PRPS1L1P21108 318 aa15.84■□□□□ 0.13
TPM1-228ENST00000560975 CPN2P22792 545 aa15.84■□□□□ 0.13
TPM1-228ENST00000560975 RPS3P23396 243 aaKnown RBP eCLIP15.84■□□□□ 0.13
TPM1-228ENST00000560975 MAP2K3P46734 347 aa15.84■□□□□ 0.13
TPM1-228ENST00000560975 TNK1Q13470 666 aa15.84■□□□□ 0.13
TPM1-228ENST00000560975 LCN1P1Q5VSP4 162 aa15.84■□□□□ 0.13
TPM1-228ENST00000560975 FBXO32Q969P5 355 aa15.84■□□□□ 0.13
TPM1-228ENST00000560975 ING3Q9NXR8 418 aa15.84■□□□□ 0.13
TPM1-228ENST00000560975 ZFP37Q9Y6Q3 630 aaPredicted RBP15.84■□□□□ 0.13
TPM1-228ENST00000560975 SLC35F4A4IF30 521 aa15.84■□□□□ 0.13
TPM1-228ENST00000560975 F5H5T6 163 aa15.84■□□□□ 0.13
TPM1-228ENST00000560975 SOX14O95416 240 aa15.84■□□□□ 0.13
TPM1-228ENST00000560975 CHMP24386 653 aa15.84■□□□□ 0.13
TPM1-228ENST00000560975 CYP4F8P98187 520 aa15.84■□□□□ 0.13
TPM1-228ENST00000560975 MTAPQ13126 283 aa15.84■□□□□ 0.13
TPM1-228ENST00000560975 GAB1Q13480 694 aa15.84■□□□□ 0.13
TPM1-228ENST00000560975 KLHL17Q6TDP4 642 aa15.84■□□□□ 0.13
TPM1-228ENST00000560975 TMIGD1Q6UXZ0 262 aa15.84■□□□□ 0.13
TPM1-228ENST00000560975 ADGRG2Q8IZP9 1017 aa15.84■□□□□ 0.13
TPM1-228ENST00000560975 C19orf18Q8NEA5 215 aa15.84■□□□□ 0.13
TPM1-228ENST00000560975 CREB3L4Q8TEY5 395 aa15.84■□□□□ 0.13
TPM1-228ENST00000560975 BHMTQ93088 406 aa15.84■□□□□ 0.13
TPM1-228ENST00000560975 ZIC5Q96T25 663 aa15.84■□□□□ 0.13
TPM1-228ENST00000560975 GALNT9Q9HCQ5 603 aa15.84■□□□□ 0.13
TPM1-228ENST00000560975 CNOT2Q9NZN8 540 aaKnown RBP15.84■□□□□ 0.13
TPM1-228ENST00000560975 MAPRE3Q9UPY8 281 aa15.84■□□□□ 0.13
TPM1-228ENST00000560975 YARS2Q9Y2Z4 477 aaKnown RBP15.84■□□□□ 0.13
TPM1-228ENST00000560975 IQCMA0A1B0GVH7 501 aa15.83■□□□□ 0.13
TPM1-228ENST00000560975 PDE9AO76083 593 aa15.83■□□□□ 0.13
TPM1-228ENST00000560975 HBQ1P09105 142 aa15.83■□□□□ 0.13
TPM1-228ENST00000560975 CR2P20023 1033 aa15.83■□□□□ 0.13
TPM1-228ENST00000560975 ITPKAP23677 461 aa15.83■□□□□ 0.13
TPM1-228ENST00000560975 EVI2BP34910 448 aa15.83■□□□□ 0.13
TPM1-228ENST00000560975 RPIAP49247 311 aa15.83■□□□□ 0.13
TPM1-228ENST00000560975 AP2S1P53680 142 aaPredicted RBP15.83■□□□□ 0.13
TPM1-228ENST00000560975 TRIQKQ629K1 86 aa15.83■□□□□ 0.13
TPM1-228ENST00000560975 FAM9CQ8IZT9 166 aa15.83■□□□□ 0.13
TPM1-228ENST00000560975 OR4M2Q8NGB6 313 aa15.83■□□□□ 0.13
TPM1-228ENST00000560975 NIPAL2Q9H841 368 aa15.83■□□□□ 0.13
TPM1-228ENST00000560975 IL17CQ9P0M4 197 aa15.83■□□□□ 0.13
TPM1-228ENST00000560975 COMMD3Q9UBI1 195 aa15.83■□□□□ 0.13
TPM1-228ENST00000560975 PIKFYVEQ9Y2I7 2098 aa15.83■□□□□ 0.13
TPM1-228ENST00000560975 FAM240BA0A1B0GVZ2 78 aa15.83■□□□□ 0.12
TPM1-228ENST00000560975 C17orf102A2RUQ5 167 aa15.83■□□□□ 0.12
TPM1-228ENST00000560975 SHOXO15266 292 aa15.83■□□□□ 0.12
TPM1-228ENST00000560975 ANXA5P08758 320 aa15.83■□□□□ 0.12
TPM1-228ENST00000560975 ETFAP13804 333 aa15.83■□□□□ 0.12
TPM1-228ENST00000560975 SLC6A4P31645 630 aa15.83■□□□□ 0.12
TPM1-228ENST00000560975 SRSF11Q05519 484 aaKnown RBP15.83■□□□□ 0.12
TPM1-228ENST00000560975 CDH18Q13634 790 aa15.83■□□□□ 0.12
TPM1-228ENST00000560975 RGNQ15493 299 aa15.83■□□□□ 0.12
TPM1-228ENST00000560975 CCDC85BQ15834 202 aaPredicted RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms