RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 NSUN5Q96P11 429 aaKnown RBP8.25□□□□□ -1.09
CCDC33-209ENST00000560565 SIGLEC11Q96RL6 698 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 KCNA7Q96RP8 456 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 SLC22A12Q96S37 553 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 GPR21Q99679 349 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 CDCA4Q9BXL8 241 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 RPRD1BQ9NQG5 326 aaKnown RBP8.25□□□□□ -1.09
CCDC33-209ENST00000560565 SACM1LQ9NTJ5 587 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 TDP1Q9NUW8 608 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 FAM120CQ9NX05 1096 aaKnown RBP8.25□□□□□ -1.09
CCDC33-209ENST00000560565 ING3Q9NXR8 418 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 OBP2AQ9NY56 170 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 TAS2R9Q9NYW1 312 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 PDP1Q9P0J1 537 aaPredicted RBP8.25□□□□□ -1.09
CCDC33-209ENST00000560565 VAPAQ9P0L0 249 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 ADAM30Q9UKF2 790 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 POU2F3Q9UKI9 436 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 PADI2Q9Y2J8 665 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 DHRS7Q9Y394 339 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 OARD1Q9Y530 152 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 TIMM22Q9Y584 194 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 ZNF106Q9H2Y7 1883 aaKnown RBP8.25□□□□□ -1.09
CCDC33-209ENST00000560565 PIKFYVEQ9Y2I7 2098 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 EP300Q09472 2414 aaPredicted RBP8.24□□□□□ -1.09
CCDC33-209ENST00000560565 TRBV5-3A0A0A0MS03 114 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 FAM170BA6NMN3 283 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 SNTNA6NMZ2 147 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 LEFTY2O00292 366 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 MAN2B1O00754 1011 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 TPD52L2O43399 206 aaKnown RBP8.24□□□□□ -1.09
CCDC33-209ENST00000560565 GALR2O43603 387 aaPredicted RBP8.24□□□□□ -1.09
CCDC33-209ENST00000560565 KDELR3O43731 214 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 XPNPEP2O43895 674 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 PRAMEF12O95522 483 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 ZNF682O95780 498 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 PEX11BO96011 259 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 IRF1P10914 325 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 DBTP11182 482 aaKnown RBP8.24□□□□□ -1.09
CCDC33-209ENST00000560565 CHRNB1P11230 501 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 CKMT1AP12532 417 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 IL7P13232 177 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 C4BPBP20851 252 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 CFL1P23528 166 aaKnown RBP8.24□□□□□ -1.09
CCDC33-209ENST00000560565 PSMA1P25786 263 aaKnown RBP8.24□□□□□ -1.09
CCDC33-209ENST00000560565 FMO3P31513 532 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 MAPK9P45984 424 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 RGS6P49758 472 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 C21orf58P58505 322 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 ERVPABLB-1P60509 514 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 RPP38P78345 283 aaKnown RBP8.24□□□□□ -1.09
CCDC33-209ENST00000560565 IL1RL1Q01638 556 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 RHAGQ02094 409 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 DSC2Q02487 901 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 RBBP4Q09028 425 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 SLC13A2Q13183 592 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 ASAH1Q13510 395 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 E2F2Q14209 437 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 UBXN2BQ14CS0 331 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 VMACQ2NL98 169 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 PYCR3Q53H96 274 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 ATAD3CQ5T2N8 411 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 TMEM236Q5W0B7 351 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 LAIR2Q6ISS4 152 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 METAP1DQ6UB28 335 aaPredicted RBP8.24□□□□□ -1.09
CCDC33-209ENST00000560565 TMPRSS11AQ6ZMR5 421 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 ZNF852Q6ZMS4 543 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 TPRG1Q6ZUI0 275 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 CREB3L2Q70SY1 520 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 AHSA2Q719I0 299 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 RPS27LQ71UM5 84 aaKnown RBP8.24□□□□□ -1.09
CCDC33-209ENST00000560565 CBLL1Q75N03 491 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 LRRC70Q7Z2Q7 622 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 DSG4Q86SJ6 1040 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 NOXA1Q86UR1 476 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 CCDC28AQ8IWP9 274 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 CHPFQ8IZ52 775 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 TCTE3Q8IZS6 198 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 SLC7A5P1Q8MH63 180 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 IL17RCQ8NAC3 791 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 NETO2Q8NC67 525 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 ARRDC2Q8TBH0 407 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 FAM110BQ8TC76 370 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 CXorf40BQ96DE9 158 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 HMCESQ96FZ2 354 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 CMTM7Q96FZ5 175 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 TEX37Q96LM6 180 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 LRRC3BQ96PB8 259 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 NELL2Q99435 816 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 SEMA3CQ99985 751 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 MGME1Q9BQP7 344 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 CINPQ9BW66 212 aaPredicted RBP8.24□□□□□ -1.09
CCDC33-209ENST00000560565 FOXQ1Q9C009 403 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 SMG9Q9H0W8 520 aaKnown RBP8.24□□□□□ -1.09
CCDC33-209ENST00000560565 IRF2BPLQ9H1B7 796 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 RUBCNLQ9H714 662 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 IPPKQ9H8X2 491 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 PCDH12Q9NPG4 1184 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 NDFIP2Q9NV92 336 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 FKBP14Q9NWM8 211 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 CLN6Q9NWW5 311 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms