RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 GTF2A1LQ9UNN4 478 aa5.91□□□□□ -1.46
HERC1-208ENST00000560462 PCDHGB3Q9Y5G1 929 aa5.91□□□□□ -1.46
HERC1-208ENST00000560462 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.91□□□□□ -1.46
HERC1-208ENST00000560462 EML6Q6ZMW3 1958 aa5.9□□□□□ -1.46
HERC1-208ENST00000560462 A0A0J9YY10 115 aa5.9□□□□□ -1.46
HERC1-208ENST00000560462 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.9□□□□□ -1.46
HERC1-208ENST00000560462 RGSL1A5PLK6 1076 aa5.9□□□□□ -1.46
HERC1-208ENST00000560462 MBD3L3A6NE82 208 aaPredicted RBP5.9□□□□□ -1.46
HERC1-208ENST00000560462 CDC7O00311 574 aa5.9□□□□□ -1.46
HERC1-208ENST00000560462 FFAR3O14843 346 aa5.9□□□□□ -1.46
HERC1-208ENST00000560462 SCAMP2O15127 329 aaKnown RBP5.9□□□□□ -1.46
HERC1-208ENST00000560462 SLC16A3O15427 465 aaKnown RBP5.9□□□□□ -1.46
HERC1-208ENST00000560462 GPR42O15529 346 aa5.9□□□□□ -1.46
HERC1-208ENST00000560462 PIP5K1CO60331 668 aa5.9□□□□□ -1.46
HERC1-208ENST00000560462 LETM1O95202 739 aaPredicted RBP5.9□□□□□ -1.46
HERC1-208ENST00000560462 PRB2P02812 416 aaPredicted RBP5.9□□□□□ -1.46
HERC1-208ENST00000560462 ESR1P03372 595 aa5.9□□□□□ -1.46
HERC1-208ENST00000560462 TUBB4AP04350 444 aa5.9□□□□□ -1.46
HERC1-208ENST00000560462 SOD3P08294 240 aa5.9□□□□□ -1.46
HERC1-208ENST00000560462 PDHA1P08559 390 aa5.9□□□□□ -1.46
HERC1-208ENST00000560462 TMEM253P0C7T8 217 aa5.9□□□□□ -1.46
HERC1-208ENST00000560462 NR2F2P24468 414 aa5.9□□□□□ -1.46
HERC1-208ENST00000560462 TRHRP34981 398 aaPredicted RBP5.9□□□□□ -1.46
HERC1-208ENST00000560462 PSMC2P35998 433 aaKnown RBP5.9□□□□□ -1.46
HERC1-208ENST00000560462 CPOXP36551 454 aa5.9□□□□□ -1.46
HERC1-208ENST00000560462 MAGEA5P43359 124 aa5.9□□□□□ -1.46
HERC1-208ENST00000560462 KIR2DL2P43627 348 aaPredicted RBP5.9□□□□□ -1.46
HERC1-208ENST00000560462 PAPOLAP51003 745 aaKnown RBP5.9□□□□□ -1.46
HERC1-208ENST00000560462 SNX16P57768 344 aa5.9□□□□□ -1.46
HERC1-208ENST00000560462 LOXL3P58215 753 aa5.9□□□□□ -1.46
HERC1-208ENST00000560462 SCGB2A2Q13296 93 aa5.9□□□□□ -1.46
HERC1-208ENST00000560462 SF3B4Q15427 424 aaKnown RBP eCLIP5.9□□□□□ -1.46
HERC1-208ENST00000560462 KHDC1Q4VXA5 237 aaKnown RBP5.9□□□□□ -1.46
HERC1-208ENST00000560462 TCTE1Q5JU00 501 aa5.9□□□□□ -1.46
HERC1-208ENST00000560462 STEAP3Q658P3 488 aa5.9□□□□□ -1.46
HERC1-208ENST00000560462 UNC13DQ70J99 1090 aa5.9□□□□□ -1.46
HERC1-208ENST00000560462 PCGF5Q86SE9 256 aa5.9□□□□□ -1.46
HERC1-208ENST00000560462 CREG2Q8IUH2 290 aa5.9□□□□□ -1.46
HERC1-208ENST00000560462 FAM109AQ8N4B1 249 aa5.9□□□□□ -1.46
HERC1-208ENST00000560462 NKAPQ8N5F7 415 aaKnown RBP5.9□□□□□ -1.46
HERC1-208ENST00000560462 PDILTQ8N807 584 aa5.9□□□□□ -1.46
HERC1-208ENST00000560462 MBD3L2Q8NHZ7 208 aaPredicted RBP5.9□□□□□ -1.46
HERC1-208ENST00000560462 PPP1R35Q8TAP8 253 aa5.9□□□□□ -1.46
HERC1-208ENST00000560462 MAP6Q96JE9 813 aa5.9□□□□□ -1.46
HERC1-208ENST00000560462 TTC25Q96NG3 672 aa5.9□□□□□ -1.46
HERC1-208ENST00000560462 OR2A14Q96R47 310 aa5.9□□□□□ -1.46
HERC1-208ENST00000560462 NUDCD1Q96RS6 583 aa5.9□□□□□ -1.46
HERC1-208ENST00000560462 MAGEB5Q9BZ81 275 aa5.9□□□□□ -1.46
HERC1-208ENST00000560462 TTTY12Q9BZ98 90 aa5.9□□□□□ -1.46
HERC1-208ENST00000560462 TFB2MQ9H5Q4 396 aaKnown RBP5.9□□□□□ -1.46
HERC1-208ENST00000560462 LRRC19Q9H756 370 aa5.9□□□□□ -1.46
HERC1-208ENST00000560462 C7orf69Q9H7B7 122 aa5.9□□□□□ -1.46
HERC1-208ENST00000560462 SYNCQ9H7C4 482 aa5.9□□□□□ -1.46
HERC1-208ENST00000560462 METTL17Q9H7H0 456 aaPredicted RBP5.9□□□□□ -1.46
HERC1-208ENST00000560462 STOML1Q9UBI4 398 aa5.9□□□□□ -1.46
HERC1-208ENST00000560462 DRG1Q9Y295 367 aaKnown RBP5.9□□□□□ -1.46
HERC1-208ENST00000560462 COQ4Q9Y3A0 265 aa5.9□□□□□ -1.46
HERC1-208ENST00000560462 WIF1Q9Y5W5 379 aa5.9□□□□□ -1.46
HERC1-208ENST00000560462 HEBP2Q9Y5Z4 205 aa5.9□□□□□ -1.46
HERC1-208ENST00000560462 HEATR5AQ86XA9 2040 aa5.9□□□□□ -1.47
HERC1-208ENST00000560462 YLPM1P49750 1951 aaKnown RBP5.89□□□□□ -1.47
HERC1-208ENST00000560462 ARHGAP21Q5T5U3 1957 aa5.89□□□□□ -1.47
HERC1-208ENST00000560462 C1orf232A0A0U1RR37 186 aa5.89□□□□□ -1.47
HERC1-208ENST00000560462 HMX2A2RU54 273 aa5.89□□□□□ -1.47
HERC1-208ENST00000560462 FITM1A5D6W6 292 aa5.89□□□□□ -1.47
HERC1-208ENST00000560462 ARHGAP42A6NI28 874 aa5.89□□□□□ -1.47
HERC1-208ENST00000560462 AHRRA9YTQ3 701 aa5.89□□□□□ -1.47
HERC1-208ENST00000560462 FOXN3O00409 490 aaPredicted RBP5.89□□□□□ -1.47
HERC1-208ENST00000560462 CALUO43852 315 aaPredicted RBP5.89□□□□□ -1.47
HERC1-208ENST00000560462 HCN1O60741 890 aa5.89□□□□□ -1.47
HERC1-208ENST00000560462 MED26O95402 600 aa5.89□□□□□ -1.47
HERC1-208ENST00000560462 PLAUP00749 431 aa5.89□□□□□ -1.47
HERC1-208ENST00000560462 HKR1P10072 659 aa5.89□□□□□ -1.47
HERC1-208ENST00000560462 PBLDP30039 288 aaPredicted RBP5.89□□□□□ -1.47
HERC1-208ENST00000560462 PTPN9P43378 593 aa5.89□□□□□ -1.47
HERC1-208ENST00000560462 ARFIP2P53365 341 aa5.89□□□□□ -1.47
HERC1-208ENST00000560462 TMEM115Q12893 351 aaPredicted RBP5.89□□□□□ -1.47
HERC1-208ENST00000560462 NRF1Q16656 503 aa5.89□□□□□ -1.47
HERC1-208ENST00000560462 CBWD6Q4V339 395 aa5.89□□□□□ -1.47
HERC1-208ENST00000560462 CBWD3Q5JTY5 395 aa5.89□□□□□ -1.47
HERC1-208ENST00000560462 CBWD5Q5RIA9 395 aa5.89□□□□□ -1.47
HERC1-208ENST00000560462 NDUFAF5Q5TEU4 345 aa5.89□□□□□ -1.47
HERC1-208ENST00000560462 RNF220Q5VTB9 566 aa5.89□□□□□ -1.47
HERC1-208ENST00000560462 ALS2CLQ60I27 953 aa5.89□□□□□ -1.47
HERC1-208ENST00000560462 PDPK2PQ6A1A2 396 aa5.89□□□□□ -1.47
HERC1-208ENST00000560462 CCDC70Q6NSX1 233 aa5.89□□□□□ -1.47
HERC1-208ENST00000560462 NPNTQ6UXI9 565 aa5.89□□□□□ -1.47
HERC1-208ENST00000560462 LANCL3Q6ZV70 420 aa5.89□□□□□ -1.47
HERC1-208ENST00000560462 USP43Q70EL4 1123 aa5.89□□□□□ -1.47
HERC1-208ENST00000560462 BNIPLQ7Z465 357 aa5.89□□□□□ -1.47
HERC1-208ENST00000560462 MDGA2Q7Z553 956 aa5.89□□□□□ -1.47
HERC1-208ENST00000560462 SLC26A11Q86WA9 606 aa5.89□□□□□ -1.47
HERC1-208ENST00000560462 ZDHHC17Q8IUH5 632 aa5.89□□□□□ -1.47
HERC1-208ENST00000560462 CYP4Z2PQ8N1L4 340 aa5.89□□□□□ -1.47
HERC1-208ENST00000560462 WDTC1Q8N5D0 677 aa5.89□□□□□ -1.47
HERC1-208ENST00000560462 C1orf131Q8NDD1 294 aaKnown RBP5.89□□□□□ -1.47
HERC1-208ENST00000560462 CCHCR1Q8TD31 782 aa5.89□□□□□ -1.47
HERC1-208ENST00000560462 ZNF606Q8WXB4 792 aa5.89□□□□□ -1.47
HERC1-208ENST00000560462 AKAP1Q92667 903 aaKnown RBP eCLIP5.89□□□□□ -1.47
HERC1-208ENST00000560462 ZC3HAV1LQ96H79 300 aaKnown RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms