RNA–Protein interactions for RNA: ENST00000559340.1

LDLR-210, Transcript of low density lipoprotein receptor, humanhuman

TSL 5

Gene LDLR, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-210ENST00000559340 PPP3R2Q96LZ3 170 aa8.78□□□□□ -1
LDLR-210ENST00000559340 SERINC2Q96SA4 455 aa8.78□□□□□ -1
LDLR-210ENST00000559340 SORT1Q99523 831 aa8.78□□□□□ -1
LDLR-210ENST00000559340 EFHD1Q9BUP0 239 aa8.78□□□□□ -1
LDLR-210ENST00000559340 NPLQ9BXD5 320 aaPredicted RBP8.78□□□□□ -1
LDLR-210ENST00000559340 TMEM121BQ9BXQ6 578 aaPredicted RBP8.78□□□□□ -1
LDLR-210ENST00000559340 ZNF304Q9HCX3 659 aa8.78□□□□□ -1
LDLR-210ENST00000559340 APMAPQ9HDC9 416 aa8.78□□□□□ -1
LDLR-210ENST00000559340 STARD5Q9NSY2 213 aa8.78□□□□□ -1
LDLR-210ENST00000559340 ADAM29Q9UKF5 820 aa8.78□□□□□ -1
LDLR-210ENST00000559340 KLK13Q9UKR3 277 aa8.78□□□□□ -1
LDLR-210ENST00000559340 SLC12A4Q9UP95 1085 aa8.78□□□□□ -1
LDLR-210ENST00000559340 CDRT15L2A8MXV6 281 aa8.77□□□□□ -1.01
LDLR-210ENST00000559340 TCP11X1B4DZS4 312 aa8.77□□□□□ -1.01
LDLR-210ENST00000559340 C9orf172C9J069 976 aa8.77□□□□□ -1.01
LDLR-210ENST00000559340 H3BMH7 237 aa8.77□□□□□ -1.01
LDLR-210ENST00000559340 MEN1O00255 615 aa8.77□□□□□ -1.01
LDLR-210ENST00000559340 HDAC3O15379 428 aa8.77□□□□□ -1.01
LDLR-210ENST00000559340 P2RX6O15547 441 aa8.77□□□□□ -1.01
LDLR-210ENST00000559340 HCRTR1O43613 425 aa8.77□□□□□ -1.01
LDLR-210ENST00000559340 BRINP1O60477 761 aa8.77□□□□□ -1.01
LDLR-210ENST00000559340 RSL1D1O76021 490 aaKnown RBP8.77□□□□□ -1.01
LDLR-210ENST00000559340 TGDSO95455 350 aa8.77□□□□□ -1.01
LDLR-210ENST00000559340 ONECUT2O95948 504 aa8.77□□□□□ -1.01
LDLR-210ENST00000559340 ZNF888P0CJ79 500 aaPredicted RBP8.77□□□□□ -1.01
LDLR-210ENST00000559340 SMIM10L1P0DMW3 83 aa8.77□□□□□ -1.01
LDLR-210ENST00000559340 MAPK1P28482 360 aa8.77□□□□□ -1.01
LDLR-210ENST00000559340 GSTM5P46439 218 aa8.77□□□□□ -1.01
LDLR-210ENST00000559340 BTN3A2P78410 334 aa8.77□□□□□ -1.01
LDLR-210ENST00000559340 OCA2Q04671 838 aa8.77□□□□□ -1.01
LDLR-210ENST00000559340 ACSM2AQ08AH3 577 aa8.77□□□□□ -1.01
LDLR-210ENST00000559340 MAD2L1Q13257 205 aaPredicted RBP8.77□□□□□ -1.01
LDLR-210ENST00000559340 ABRAXAS2Q15018 415 aa8.77□□□□□ -1.01
LDLR-210ENST00000559340 SPIN4Q56A73 249 aa8.77□□□□□ -1.01
LDLR-210ENST00000559340 SPDYAQ5MJ70 313 aa8.77□□□□□ -1.01
LDLR-210ENST00000559340 ACSM2BQ68CK6 577 aa8.77□□□□□ -1.01
LDLR-210ENST00000559340 CLEC6AQ6EIG7 209 aa8.77□□□□□ -1.01
LDLR-210ENST00000559340 OR4C11Q6IEV9 310 aa8.77□□□□□ -1.01
LDLR-210ENST00000559340 ABHD17CQ6PCB6 329 aa8.77□□□□□ -1.01
LDLR-210ENST00000559340 CYP20A1Q6UW02 462 aa8.77□□□□□ -1.01
LDLR-210ENST00000559340 MTERF4Q7Z6M4 381 aaKnown RBP8.77□□□□□ -1.01
LDLR-210ENST00000559340 LRRC34Q8IZ02 419 aa8.77□□□□□ -1.01
LDLR-210ENST00000559340 FAM9CQ8IZT9 166 aa8.77□□□□□ -1.01
LDLR-210ENST00000559340 DSELQ8IZU8 1212 aa8.77□□□□□ -1.01
LDLR-210ENST00000559340 NLGN4XQ8N0W4 816 aa8.77□□□□□ -1.01
LDLR-210ENST00000559340 ZNF781Q8N8C0 355 aa8.77□□□□□ -1.01
LDLR-210ENST00000559340 KCT2Q8NC54 265 aa8.77□□□□□ -1.01
LDLR-210ENST00000559340 NLGN4YQ8NFZ3 816 aaPredicted RBP8.77□□□□□ -1.01
LDLR-210ENST00000559340 ZCCHC10Q8TBK6 192 aa8.77□□□□□ -1.01
LDLR-210ENST00000559340 AGR3Q8TD06 166 aa8.77□□□□□ -1.01
LDLR-210ENST00000559340 ADAMTS18Q8TE60 1221 aa8.77□□□□□ -1.01
LDLR-210ENST00000559340 MR1Q95460 341 aa8.77□□□□□ -1.01
LDLR-210ENST00000559340 MMABQ96EY8 250 aaPredicted RBP8.77□□□□□ -1.01
LDLR-210ENST00000559340 SMIM10Q96HG1 83 aa8.77□□□□□ -1.01
LDLR-210ENST00000559340 F2RL3Q96RI0 385 aa8.77□□□□□ -1.01
LDLR-210ENST00000559340 KCNA7Q96RP8 456 aa8.77□□□□□ -1.01
LDLR-210ENST00000559340 SIKE1Q9BRV8 207 aa8.77□□□□□ -1.01
LDLR-210ENST00000559340 OR51B5Q9H339 312 aa8.77□□□□□ -1.01
LDLR-210ENST00000559340 CCDC134Q9H6E4 229 aa8.77□□□□□ -1.01
LDLR-210ENST00000559340 ACSL6Q9UKU0 697 aa8.77□□□□□ -1.01
LDLR-210ENST00000559340 WBP11Q9Y2W2 641 aaKnown RBP8.77□□□□□ -1.01
LDLR-210ENST00000559340 TMED5Q9Y3A6 229 aa8.77□□□□□ -1.01
LDLR-210ENST00000559340 DNAJC15Q9Y5T4 150 aa8.77□□□□□ -1.01
LDLR-210ENST00000559340 FAM208BQ5VWN6 2430 aa8.76□□□□□ -1.01
LDLR-210ENST00000559340 NUP214P35658 2090 aaPredicted RBP8.76□□□□□ -1.01
LDLR-210ENST00000559340 A0A1B0GTL3 188 aa8.76□□□□□ -1.01
LDLR-210ENST00000559340 A0A1W2PNU3 283 aaPredicted RBP8.76□□□□□ -1.01
LDLR-210ENST00000559340 BLACEA4D250 179 aa8.76□□□□□ -1.01
LDLR-210ENST00000559340 SYNDIG1LA6NDD5 238 aa8.76□□□□□ -1.01
LDLR-210ENST00000559340 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.76□□□□□ -1.01
LDLR-210ENST00000559340 NPIPB8E9PQR5 432 aa8.76□□□□□ -1.01
LDLR-210ENST00000559340 PSMD12O00232 456 aaPredicted RBP8.76□□□□□ -1.01
LDLR-210ENST00000559340 RAD1O60671 282 aa8.76□□□□□ -1.01
LDLR-210ENST00000559340 GALR3O60755 368 aaPredicted RBP8.76□□□□□ -1.01
LDLR-210ENST00000559340 SEC22BO75396 215 aa8.76□□□□□ -1.01
LDLR-210ENST00000559340 KLHL18O94889 574 aa8.76□□□□□ -1.01
LDLR-210ENST00000559340 DLGAP3O95886 979 aa8.76□□□□□ -1.01
LDLR-210ENST00000559340 ALBP02768 609 aa8.76□□□□□ -1.01
LDLR-210ENST00000559340 STATHP02808 62 aa8.76□□□□□ -1.01
LDLR-210ENST00000559340 VIMP08670 466 aaKnown RBP8.76□□□□□ -1.01
LDLR-210ENST00000559340 TROVE2P10155 538 aaKnown RBP eCLIP8.76□□□□□ -1.01
LDLR-210ENST00000559340 KITP10721 976 aa8.76□□□□□ -1.01
LDLR-210ENST00000559340 DDX5P17844 614 aaKnown RBP8.76□□□□□ -1.01
LDLR-210ENST00000559340 ITGAXP20702 1163 aa8.76□□□□□ -1.01
LDLR-210ENST00000559340 FBLP22087 321 aaKnown RBP8.76□□□□□ -1.01
LDLR-210ENST00000559340 PRPH2P23942 346 aa8.76□□□□□ -1.01
LDLR-210ENST00000559340 TLX1P31314 330 aaPredicted RBP8.76□□□□□ -1.01
LDLR-210ENST00000559340 HNRNPH1P31943 449 aaKnown RBP8.76□□□□□ -1.01
LDLR-210ENST00000559340 SSR2P43308 183 aa8.76□□□□□ -1.01
LDLR-210ENST00000559340 GCGRP47871 477 aa8.76□□□□□ -1.01
LDLR-210ENST00000559340 PLA2G16P53816 162 aa8.76□□□□□ -1.01
LDLR-210ENST00000559340 FOXA1P55317 472 aa8.76□□□□□ -1.01
LDLR-210ENST00000559340 RAB8AP61006 207 aa8.76□□□□□ -1.01
LDLR-210ENST00000559340 RPS15P62841 145 aaKnown RBP8.76□□□□□ -1.01
LDLR-210ENST00000559340 TRA2BP62995 288 aaKnown RBP8.76□□□□□ -1.01
LDLR-210ENST00000559340 GUCY1A3Q02108 690 aa8.76□□□□□ -1.01
LDLR-210ENST00000559340 HYAL2Q12891 473 aa8.76□□□□□ -1.01
LDLR-210ENST00000559340 SLC9A5Q14940 896 aa8.76□□□□□ -1.01
LDLR-210ENST00000559340 NR6A1Q15406 480 aa8.76□□□□□ -1.01
LDLR-210ENST00000559340 SMU1Q2TAY7 513 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms