RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 GRK3P35626 688 aa12.7□□□□□ -0.38
VPS18-203ENST00000558855 ARL4CP56559 192 aa12.7□□□□□ -0.38
VPS18-203ENST00000558855 ADORA2A-AS1P86434 159 aa12.7□□□□□ -0.38
VPS18-203ENST00000558855 HSF1Q00613 529 aa12.7□□□□□ -0.38
VPS18-203ENST00000558855 RUNX2Q13950 521 aa12.7□□□□□ -0.38
VPS18-203ENST00000558855 FRG1Q14331 258 aaKnown RBP12.7□□□□□ -0.38
VPS18-203ENST00000558855 CSHL1Q14406 222 aa12.7□□□□□ -0.38
VPS18-203ENST00000558855 HERC3Q15034 1050 aa12.7□□□□□ -0.38
VPS18-203ENST00000558855 C3AR1Q16581 482 aa12.7□□□□□ -0.38
VPS18-203ENST00000558855 FGD2Q7Z6J4 655 aa12.7□□□□□ -0.38
VPS18-203ENST00000558855 TICAM1Q8IUC6 712 aa12.7□□□□□ -0.38
VPS18-203ENST00000558855 SIAH3Q8IW03 269 aa12.7□□□□□ -0.38
VPS18-203ENST00000558855 RHBDF1Q96CC6 855 aa12.7□□□□□ -0.38
VPS18-203ENST00000558855 LRRC39Q96DD0 335 aa12.7□□□□□ -0.38
VPS18-203ENST00000558855 VPS39Q96JC1 886 aa12.7□□□□□ -0.38
VPS18-203ENST00000558855 KRT12Q99456 494 aa12.7□□□□□ -0.38
VPS18-203ENST00000558855 LPAR4Q99677 370 aa12.7□□□□□ -0.38
VPS18-203ENST00000558855 RHBGQ9H310 441 aa12.7□□□□□ -0.38
VPS18-203ENST00000558855 CDCP1Q9H5V8 836 aa12.7□□□□□ -0.38
VPS18-203ENST00000558855 PELI2Q9HAT8 420 aa12.7□□□□□ -0.38
VPS18-203ENST00000558855 SEC14L3Q9UDX4 400 aa12.7□□□□□ -0.38
VPS18-203ENST00000558855 TINAGQ9UJW2 476 aa12.7□□□□□ -0.38
VPS18-203ENST00000558855 OARD1Q9Y530 152 aa12.7□□□□□ -0.38
VPS18-203ENST00000558855 NCKAP5O14513 1909 aa12.7□□□□□ -0.38
VPS18-203ENST00000558855 ABCA12Q86UK0 2595 aa12.7□□□□□ -0.38
VPS18-203ENST00000558855 TRGV8A0A0C4DH27 118 aa12.69□□□□□ -0.38
VPS18-203ENST00000558855 MYOCOSA0A1B0GUC4 107 aa12.69□□□□□ -0.38
VPS18-203ENST00000558855 TCRBV16S1A1N1A0A5B0 115 aa12.69□□□□□ -0.38
VPS18-203ENST00000558855 ASPDHA6ND91 283 aa12.69□□□□□ -0.38
VPS18-203ENST00000558855 NCF1BA6NI72 391 aaPredicted RBP12.69□□□□□ -0.38
VPS18-203ENST00000558855 NCF1CA8MVU1 366 aaPredicted RBP12.69□□□□□ -0.38
VPS18-203ENST00000558855 EFCAB8A8MWE9 144 aa12.69□□□□□ -0.38
VPS18-203ENST00000558855 PHGDHO43175 533 aaKnown RBP12.69□□□□□ -0.38
VPS18-203ENST00000558855 PRKNO60260 465 aaPredicted RBP12.69□□□□□ -0.38
VPS18-203ENST00000558855 WDR47O94967 919 aa12.69□□□□□ -0.38
VPS18-203ENST00000558855 NCF1P14598 390 aaPredicted RBP12.69□□□□□ -0.38
VPS18-203ENST00000558855 EPORP19235 508 aa12.69□□□□□ -0.38
VPS18-203ENST00000558855 CD22P20273 847 aa12.69□□□□□ -0.38
VPS18-203ENST00000558855 AHRP35869 848 aa12.69□□□□□ -0.38
VPS18-203ENST00000558855 CA7P43166 264 aa12.69□□□□□ -0.38
VPS18-203ENST00000558855 RBBP5Q15291 538 aaKnown RBP12.69□□□□□ -0.38
VPS18-203ENST00000558855 OR4D1Q15615 310 aa12.69□□□□□ -0.38
VPS18-203ENST00000558855 EXT1Q16394 746 aa12.69□□□□□ -0.38
VPS18-203ENST00000558855 MEP1AQ16819 746 aa12.69□□□□□ -0.38
VPS18-203ENST00000558855 C16orf47Q6ZP98 133 aaPredicted RBP12.69□□□□□ -0.38
VPS18-203ENST00000558855 SLCO4C1Q6ZQN7 724 aa12.69□□□□□ -0.38
VPS18-203ENST00000558855 SYDE1Q6ZW31 735 aaPredicted RBP12.69□□□□□ -0.38
VPS18-203ENST00000558855 GALNTL5Q7Z4T8 443 aa12.69□□□□□ -0.38
VPS18-203ENST00000558855 KLHDC8AQ8IYD2 350 aa12.69□□□□□ -0.38
VPS18-203ENST00000558855 CYP4X1Q8N118 509 aa12.69□□□□□ -0.38
VPS18-203ENST00000558855 ZNF354BQ96LW1 612 aa12.69□□□□□ -0.38
VPS18-203ENST00000558855 PTCHD1Q96NR3 888 aa12.69□□□□□ -0.38
VPS18-203ENST00000558855 QRFPRQ96P65 431 aa12.69□□□□□ -0.38
VPS18-203ENST00000558855 CSF3RQ99062 836 aa12.69□□□□□ -0.38
VPS18-203ENST00000558855 DPH5Q9H2P9 285 aa12.69□□□□□ -0.38
VPS18-203ENST00000558855 GRHL1Q9NZI5 618 aa12.69□□□□□ -0.38
VPS18-203ENST00000558855 OTOGQ6ZRI0 2925 aa12.68□□□□□ -0.38
VPS18-203ENST00000558855 A0A1B0GUH1 482 aa12.68□□□□□ -0.38
VPS18-203ENST00000558855 SAGE2PA6NJ88 616 aa12.68□□□□□ -0.38
VPS18-203ENST00000558855 PRSS44E7EML9 344 aa12.68□□□□□ -0.38
VPS18-203ENST00000558855 CCL21O00585 134 aa12.68□□□□□ -0.38
VPS18-203ENST00000558855 FAM155BO75949 473 aa12.68□□□□□ -0.38
VPS18-203ENST00000558855 KCNC1P48547 511 aa12.68□□□□□ -0.38
VPS18-203ENST00000558855 PER3P56645 1201 aa12.68□□□□□ -0.38
VPS18-203ENST00000558855 GPX6P59796 221 aa12.68□□□□□ -0.38
VPS18-203ENST00000558855 CDKL1Q00532 357 aa12.68□□□□□ -0.38
VPS18-203ENST00000558855 ACTN3Q08043 901 aaPredicted RBP12.68□□□□□ -0.38
VPS18-203ENST00000558855 RGS1Q08116 209 aa12.68□□□□□ -0.38
VPS18-203ENST00000558855 CBLBQ13191 982 aa12.68□□□□□ -0.38
VPS18-203ENST00000558855 SLBPQ14493 270 aaKnown RBP eCLIP12.68□□□□□ -0.38
VPS18-203ENST00000558855 TRADDQ15628 312 aa12.68□□□□□ -0.38
VPS18-203ENST00000558855 UBAP2Q5T6F2 1119 aaKnown RBP12.68□□□□□ -0.38
VPS18-203ENST00000558855 SP5Q6BEB4 398 aaPredicted RBP12.68□□□□□ -0.38
VPS18-203ENST00000558855 QSOX2Q6ZRP7 698 aa12.68□□□□□ -0.38
VPS18-203ENST00000558855 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.68□□□□□ -0.38
VPS18-203ENST00000558855 SRRM1Q8IYB3 904 aaKnown RBP12.68□□□□□ -0.38
VPS18-203ENST00000558855 ZBED8Q8IZ13 594 aa12.68□□□□□ -0.38
VPS18-203ENST00000558855 C17orf53Q8N3J3 647 aaPredicted RBP12.68□□□□□ -0.38
VPS18-203ENST00000558855 APCDD1LQ8NCL9 501 aa12.68□□□□□ -0.38
VPS18-203ENST00000558855 DNAJB8Q8NHS0 232 aa12.68□□□□□ -0.38
VPS18-203ENST00000558855 SREK1Q8WXA9 508 aaKnown RBP12.68□□□□□ -0.38
VPS18-203ENST00000558855 ATL1Q8WXF7 558 aa12.68□□□□□ -0.38
VPS18-203ENST00000558855 MARVELD3Q96A59 401 aa12.68□□□□□ -0.38
VPS18-203ENST00000558855 PDLIM2Q96JY6 352 aa12.68□□□□□ -0.38
VPS18-203ENST00000558855 NAPGQ99747 312 aaPredicted RBP12.68□□□□□ -0.38
VPS18-203ENST00000558855 EGFL8Q99944 293 aa12.68□□□□□ -0.38
VPS18-203ENST00000558855 UTP23Q9BRU9 249 aaKnown RBP12.68□□□□□ -0.38
VPS18-203ENST00000558855 TRIM54Q9BYV2 358 aa12.68□□□□□ -0.38
VPS18-203ENST00000558855 FAM129AQ9BZQ8 928 aa12.68□□□□□ -0.38
VPS18-203ENST00000558855 RHOJQ9H4E5 214 aa12.68□□□□□ -0.38
VPS18-203ENST00000558855 DYRK1BQ9Y463 629 aa12.68□□□□□ -0.38
VPS18-203ENST00000558855 SAR1BQ9Y6B6 198 aa12.68□□□□□ -0.38
VPS18-203ENST00000558855 C19orf84I3L1E1 186 aa12.67□□□□□ -0.38
VPS18-203ENST00000558855 NDC80O14777 642 aa12.67□□□□□ -0.38
VPS18-203ENST00000558855 RAD51CO43502 376 aa12.67□□□□□ -0.38
VPS18-203ENST00000558855 CRYABP02511 175 aaKnown RBP12.67□□□□□ -0.38
VPS18-203ENST00000558855 SP1P08047 785 aa12.67□□□□□ -0.38
VPS18-203ENST00000558855 C1GALT1C1LP0DN25 315 aa12.67□□□□□ -0.38
VPS18-203ENST00000558855 RFC3P40938 356 aa12.67□□□□□ -0.38
VPS18-203ENST00000558855 MLF1P58340 268 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms