RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 GPR107Q5VW38 600 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 ANKRD54Q6NXT1 300 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 GALNT18Q6P9A2 607 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 R3HCC1LQ7Z5L2 792 aaKnown RBP10.1□□□□□ -0.79
TPM1-210ENST00000558264 SLC44A2Q8IWA5 706 aaPredicted RBP10.1□□□□□ -0.79
TPM1-210ENST00000558264 ZC3H7AQ8IWR0 971 aaKnown RBP10.1□□□□□ -0.79
TPM1-210ENST00000558264 ADGRF3Q8IZF5 1079 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 METTL4Q8N3J2 472 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 SVOPLQ8N434 492 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 NFKBIDQ8NI38 313 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 SPPL2AQ8TCT8 520 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 SLC6A16Q9GZN6 736 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 CHST8Q9H2A9 424 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 DZANK1Q9NVP4 752 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 PTTG2Q9NZH5 202 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 PDP1Q9P0J1 537 aaPredicted RBP10.1□□□□□ -0.79
TPM1-210ENST00000558264 BTNL2Q9UIR0 455 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 BAG5Q9UL15 447 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 SAMHD1Q9Y3Z3 626 aaKnown RBP10.1□□□□□ -0.79
TPM1-210ENST00000558264 TBC1D3DA0A087WVF3 549 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 TBC1D3IA0A087WXS9 549 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 TBC1D3EA0A087X179 549 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 TBC1D3KA0A087X1G2 549 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 LOC100130705A0A1B0GUX0 176 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 A0A1W2PPV9 198 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 TBC1D3FA6NER0 549 aaPredicted RBP10.1□□□□□ -0.79
TPM1-210ENST00000558264 TBC1D3LB9A6J9 549 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 PTGES3LE9PB15 166 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 RNASET2O00584 256 aaKnown RBP10.1□□□□□ -0.79
TPM1-210ENST00000558264 LCMT2O60294 686 aaKnown RBP10.1□□□□□ -0.79
TPM1-210ENST00000558264 MAN1A2O60476 641 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 PRKRAO75569 313 aaKnown RBP10.1□□□□□ -0.79
TPM1-210ENST00000558264 TBC1D3HP0C7X1 549 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 DAPP51397 102 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 MVDP53602 400 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 PLA2G16P53816 162 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 CLDN2P57739 230 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 TUBA4AP68366 448 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 CD47Q08722 323 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 SGCGQ13326 291 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 RAPSNQ13702 412 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 RAB39AQ14964 217 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 CLCA4Q14CN2 919 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 TBC1D3GQ6DHY5 549 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 FAM71E1Q6IPT2 247 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 TBC1D3CQ6IPX1 549 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 LCTLQ6UWM7 567 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 THAP5Q7Z6K1 395 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 SLC9B2Q86UD5 537 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 TBC1D3Q8IZP1 549 aaPredicted RBP10.1□□□□□ -0.79
TPM1-210ENST00000558264 SMYD1Q8NB12 490 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 TP53I13Q8NBR0 393 aaPredicted RBP10.1□□□□□ -0.79
TPM1-210ENST00000558264 OR52J3Q8NH60 311 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 STARD8Q92502 1023 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 MENTQ9BUN1 341 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 TRIT1Q9H3H1 467 aaKnown RBP10.1□□□□□ -0.79
TPM1-210ENST00000558264 PRDM8Q9NQV8 689 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 SIRT5Q9NXA8 310 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 TAAR2Q9P1P5 351 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 TESMINQ9Y4I5 508 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 A0A1W2PRB8 838 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 H0Y8X5 98 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 KMOO15229 486 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 XPNPEP2O43895 674 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 HPRP00739 348 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 COL9A1P20849 921 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 C5AR1P21730 350 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 FUT4P22083 530 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 MAGEA2P43356 314 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 KIR2DL1P43626 348 aaPredicted RBP10.1□□□□□ -0.79
TPM1-210ENST00000558264 C21orf58P58505 322 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 ESRRGP62508 458 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 PPP2CBP62714 309 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 PPP2CAP67775 309 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 IL5RAQ01344 420 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 KRT33BQ14525 404 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 TMEM196Q5HYL7 178 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 ATAT1Q5SQI0 421 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 CBLL1Q75N03 491 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 EIF3MQ7L2H7 374 aaKnown RBP10.1□□□□□ -0.79
TPM1-210ENST00000558264 RD3Q7Z3Z2 195 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.1□□□□□ -0.79
TPM1-210ENST00000558264 KRT78Q8N1N4 520 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 BPIFB6Q8NFQ5 453 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 TEX101Q9BY14 249 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 BHLHE41Q9C0J9 482 aaPredicted RBP10.1□□□□□ -0.79
TPM1-210ENST00000558264 EHD1Q9H4M9 534 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 RUBCNLQ9H714 662 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 FANCEQ9HB96 536 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 VCX3AQ9NNX9 186 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 SLAMF7Q9NQ25 335 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 LMCD1Q9NZU5 365 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 ATP6V1HQ9UI12 483 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 RPS6KA6Q9UK32 745 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 TRBV23OR9-2A0A075B6M9 112 aa10.09□□□□□ -0.79
TPM1-210ENST00000558264 TMEM229AB2RXF0 380 aa10.09□□□□□ -0.79
TPM1-210ENST00000558264 FOXD2O60548 495 aaPredicted RBP10.09□□□□□ -0.79
TPM1-210ENST00000558264 IGFALSP35858 605 aa10.09□□□□□ -0.79
TPM1-210ENST00000558264 MAPK12P53778 367 aa10.09□□□□□ -0.79
TPM1-210ENST00000558264 TFF2Q03403 129 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms