RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 CMTM7Q96FZ5 175 aa24.22■■□□□ 1.47
SMAD6-202ENST00000557916 SMIM10Q96HG1 83 aa24.22■■□□□ 1.47
SMAD6-202ENST00000557916 FAR2Q96K12 515 aa24.22■■□□□ 1.47
SMAD6-202ENST00000557916 F2RL3Q96RI0 385 aa24.22■■□□□ 1.47
SMAD6-202ENST00000557916 SLC26A1Q9H2B4 701 aa24.22■■□□□ 1.47
SMAD6-202ENST00000557916 CTSFQ9UBX1 484 aa24.22■■□□□ 1.47
SMAD6-202ENST00000557916 ZNF282Q9UDV7 671 aaPredicted RBP24.22■■□□□ 1.47
SMAD6-202ENST00000557916 MAP4K5Q9Y4K4 846 aa24.22■■□□□ 1.47
SMAD6-202ENST00000557916 EPG5Q9HCE0 2579 aa24.22■■□□□ 1.47
SMAD6-202ENST00000557916 DSPP15924 2871 aaKnown RBP24.21■■□□□ 1.47
SMAD6-202ENST00000557916 ZNF891A8MT65 544 aaPredicted RBP24.21■■□□□ 1.47
SMAD6-202ENST00000557916 C4orf51C9J302 202 aa24.21■■□□□ 1.47
SMAD6-202ENST00000557916 K7ENP7 123 aa24.21■■□□□ 1.47
SMAD6-202ENST00000557916 ERI3O43414 337 aaKnown RBP24.21■■□□□ 1.47
SMAD6-202ENST00000557916 SH3BGRLO75368 114 aa24.21■■□□□ 1.47
SMAD6-202ENST00000557916 RDH16O75452 317 aa24.21■■□□□ 1.47
SMAD6-202ENST00000557916 KLF7O75840 302 aaPredicted RBP24.21■■□□□ 1.47
SMAD6-202ENST00000557916 BPGMP07738 259 aa24.21■■□□□ 1.47
SMAD6-202ENST00000557916 CXADRP78310 365 aa24.21■■□□□ 1.47
SMAD6-202ENST00000557916 MAT1AQ00266 395 aaKnown RBP24.21■■□□□ 1.47
SMAD6-202ENST00000557916 OCA2Q04671 838 aa24.21■■□□□ 1.47
SMAD6-202ENST00000557916 VAC14Q08AM6 782 aa24.21■■□□□ 1.47
SMAD6-202ENST00000557916 IFT88Q13099 833 aa24.21■■□□□ 1.47
SMAD6-202ENST00000557916 NKG7Q16617 165 aa24.21■■□□□ 1.47
SMAD6-202ENST00000557916 FAM69BQ5VUD6 431 aa24.21■■□□□ 1.47
SMAD6-202ENST00000557916 FRG2Q64ET8 278 aa24.21■■□□□ 1.47
SMAD6-202ENST00000557916 INO80CQ6PI98 192 aaPredicted RBP24.21■■□□□ 1.47
SMAD6-202ENST00000557916 C19orf48Q6RUI8 117 aa24.21■■□□□ 1.47
SMAD6-202ENST00000557916 CHSY3Q70JA7 882 aa24.21■■□□□ 1.47
SMAD6-202ENST00000557916 CDYL2Q8N8U2 506 aa24.21■■□□□ 1.47
SMAD6-202ENST00000557916 OR2L5Q8NG80 312 aa24.21■■□□□ 1.47
SMAD6-202ENST00000557916 FRG2BQ96QU4 278 aa24.21■■□□□ 1.47
SMAD6-202ENST00000557916 ELOVL6Q9H5J4 265 aa24.21■■□□□ 1.47
SMAD6-202ENST00000557916 WDR54Q9H977 334 aa24.21■■□□□ 1.47
SMAD6-202ENST00000557916 MID1IP1Q9NPA3 183 aa24.21■■□□□ 1.47
SMAD6-202ENST00000557916 DMRT3Q9NQL9 472 aa24.21■■□□□ 1.47
SMAD6-202ENST00000557916 PTRH2Q9Y3E5 179 aaKnown RBP24.21■■□□□ 1.47
SMAD6-202ENST00000557916 ZNF860A6NHJ4 632 aa24.2■■□□□ 1.46
SMAD6-202ENST00000557916 ESRRBO95718 433 aa24.2■■□□□ 1.46
SMAD6-202ENST00000557916 CCR10P46092 362 aa24.2■■□□□ 1.46
SMAD6-202ENST00000557916 PLA2G16P53816 162 aa24.2■■□□□ 1.46
SMAD6-202ENST00000557916 RPS13P62277 151 aaKnown RBP24.2■■□□□ 1.46
SMAD6-202ENST00000557916 MC1RQ01726 317 aa24.2■■□□□ 1.46
SMAD6-202ENST00000557916 SYT16Q17RD7 645 aa24.2■■□□□ 1.46
SMAD6-202ENST00000557916 C10orf62Q5T681 223 aaPredicted RBP24.2■■□□□ 1.46
SMAD6-202ENST00000557916 TRIM40Q6P9F5 258 aa24.2■■□□□ 1.46
SMAD6-202ENST00000557916 AGAP11Q8TF27 550 aa24.2■■□□□ 1.46
SMAD6-202ENST00000557916 OR51B5Q9H339 312 aa24.2■■□□□ 1.46
SMAD6-202ENST00000557916 HCN3Q9P1Z3 774 aa24.2■■□□□ 1.46
SMAD6-202ENST00000557916 SNX6Q9UNH7 406 aa24.2■■□□□ 1.46
SMAD6-202ENST00000557916 CFAP47Q6ZTR5 3102 aa24.2■■□□□ 1.46
SMAD6-202ENST00000557916 A0A0G2JN53 185 aa24.19■■□□□ 1.46
SMAD6-202ENST00000557916 MAGEB17A8MXT2 336 aa24.19■■□□□ 1.46
SMAD6-202ENST00000557916 FOXE1O00358 373 aaPredicted RBP24.19■■□□□ 1.46
SMAD6-202ENST00000557916 UBFD1O14562 309 aaKnown RBP24.19■■□□□ 1.46
SMAD6-202ENST00000557916 NKX2-8O15522 239 aa24.19■■□□□ 1.46
SMAD6-202ENST00000557916 FOLR3P41439 243 aa24.19■■□□□ 1.46
SMAD6-202ENST00000557916 SERPINB4P48594 390 aa24.19■■□□□ 1.46
SMAD6-202ENST00000557916 FOXL2P58012 376 aa24.19■■□□□ 1.46
SMAD6-202ENST00000557916 BTN3A2P78410 334 aa24.19■■□□□ 1.46
SMAD6-202ENST00000557916 TGM3Q08188 693 aa24.19■■□□□ 1.46
SMAD6-202ENST00000557916 TMEM35AQ53FP2 167 aa24.19■■□□□ 1.46
SMAD6-202ENST00000557916 SGO1Q5FBB7 561 aa24.19■■□□□ 1.46
SMAD6-202ENST00000557916 DEPDC1Q5TB30 811 aa24.19■■□□□ 1.46
SMAD6-202ENST00000557916 KHDRBS2Q5VWX1 349 aaKnown RBP24.19■■□□□ 1.46
SMAD6-202ENST00000557916 ABHD17CQ6PCB6 329 aa24.19■■□□□ 1.46
SMAD6-202ENST00000557916 NUDCD3Q8IVD9 361 aa24.19■■□□□ 1.46
SMAD6-202ENST00000557916 GOLGA6L1Q8N7Z2 621 aa24.19■■□□□ 1.46
SMAD6-202ENST00000557916 ANKRD42Q8N9B4 389 aa24.19■■□□□ 1.46
SMAD6-202ENST00000557916 OR2Y1Q8NGV0 311 aa24.19■■□□□ 1.46
SMAD6-202ENST00000557916 METTL6Q8TCB7 284 aa24.19■■□□□ 1.46
SMAD6-202ENST00000557916 STT3BQ8TCJ2 826 aa24.19■■□□□ 1.46
SMAD6-202ENST00000557916 CNDP1Q96KN2 507 aa24.19■■□□□ 1.46
SMAD6-202ENST00000557916 PKNOX2Q96KN3 472 aa24.19■■□□□ 1.46
SMAD6-202ENST00000557916 SLC29A3Q9BZD2 475 aa24.19■■□□□ 1.46
SMAD6-202ENST00000557916 MKKSQ9NPJ1 570 aaPredicted RBP24.19■■□□□ 1.46
SMAD6-202ENST00000557916 NXT1Q9UKK6 140 aaKnown RBP24.19■■□□□ 1.46
SMAD6-202ENST00000557916 PKD1L2Q7Z442 2459 aa24.19■■□□□ 1.46
SMAD6-202ENST00000557916 IGLV3-12A0A075B6K2 115 aa24.18■■□□□ 1.46
SMAD6-202ENST00000557916 A0A088AWK7 358 aa24.18■■□□□ 1.46
SMAD6-202ENST00000557916 TMEM120BA0PK00 339 aa24.18■■□□□ 1.46
SMAD6-202ENST00000557916 VSTM2BA6NLU5 285 aa24.18■■□□□ 1.46
SMAD6-202ENST00000557916 SASH3O75995 380 aa24.18■■□□□ 1.46
SMAD6-202ENST00000557916 ENO1P06733 434 aaKnown RBP24.18■■□□□ 1.46
SMAD6-202ENST00000557916 ZNF10P21506 573 aaPredicted RBP24.18■■□□□ 1.46
SMAD6-202ENST00000557916 PTX3P26022 381 aaPredicted RBP24.18■■□□□ 1.46
SMAD6-202ENST00000557916 ERV3-1Q14264 604 aa24.18■■□□□ 1.46
SMAD6-202ENST00000557916 VWA2Q5GFL6 755 aa24.18■■□□□ 1.46
SMAD6-202ENST00000557916 SRFBP1Q8NEF9 429 aaKnown RBP24.18■■□□□ 1.46
SMAD6-202ENST00000557916 OR5T3Q8NGG3 340 aa24.18■■□□□ 1.46
SMAD6-202ENST00000557916 OR51Q1Q8NH59 317 aa24.18■■□□□ 1.46
SMAD6-202ENST00000557916 MIEF2Q96C03 454 aa24.18■■□□□ 1.46
SMAD6-202ENST00000557916 CRELD1Q96HD1 420 aa24.18■■□□□ 1.46
SMAD6-202ENST00000557916 SPSB2Q99619 263 aa24.18■■□□□ 1.46
SMAD6-202ENST00000557916 SH3GL2Q99962 352 aa24.18■■□□□ 1.46
SMAD6-202ENST00000557916 TRMOQ9BU70 441 aa24.18■■□□□ 1.46
SMAD6-202ENST00000557916 SOX17Q9H6I2 414 aaPredicted RBP24.18■■□□□ 1.46
SMAD6-202ENST00000557916 SCN3AQ9NY46 2000 aa24.18■■□□□ 1.46
SMAD6-202ENST00000557916 PSD3Q9NYI0 1048 aa24.18■■□□□ 1.46
SMAD6-202ENST00000557916 WDR91A4D1P6 747 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms