RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 PLEKHS1Q5SXH7 462 aa11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 GCNT6Q5T4J0 391 aa11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 CRTC1Q6UUV9 634 aa11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 C1orf52Q8N6N3 182 aaKnown RBP11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 GALNT6Q8NCL4 622 aa11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 FBXO22Q8NEZ5 403 aa11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 GTPBP3Q969Y2 492 aaKnown RBP11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 COQ8BQ96D53 544 aa11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 LYSMD1Q96S90 227 aa11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 ASAH2Q9NR71 780 aa11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 SH3BP4Q9P0V3 963 aa11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 IGLV3-16A0A075B6K0 115 aa11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 KRT87PA6NCN2 255 aa11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 RNASET2O00584 256 aaKnown RBP11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 SEPT4O43236 478 aa11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 SCO2O43819 266 aa11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 IGSF6O95976 241 aa11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 CKBP12277 381 aa11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 ETFAP13804 333 aa11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 SEMG2Q02383 582 aa11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 RBBP4Q09028 425 aa11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 KCNC3Q14003 757 aa11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 SCARB2Q14108 478 aa11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 DOC2AQ14183 400 aa11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 CDK10Q15131 360 aa11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 LRRC66Q68CR7 880 aa11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 TMPRSS11AQ6ZMR5 421 aa11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 TPRG1Q6ZUI0 275 aa11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 TRIM69Q86WT6 500 aa11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 APCDD1Q8J025 514 aa11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 WFDC5Q8TCV5 224 aa11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 GEMIN6Q8WXD5 167 aaKnown RBP11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 C11orf24Q96F05 449 aaPredicted RBP11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 ST6GAL2Q96JF0 529 aa11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 NEDD4LQ96PU5 975 aa11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 MCCC1Q96RQ3 725 aaPredicted RBP11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 PHOX2BQ99453 314 aa11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 PIP5K1AQ99755 562 aa11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 TBC1D14Q9P2M4 693 aa11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 SLC6A14Q9UN76 642 aa11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 C2orf78A6NCI8 922 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 NT5C1B-RDH14C9J2C7 533 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 AP3D1O14617 1153 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 PCDH17O14917 1159 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 GUCY1B2O75343 617 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 TNFRSF21O75509 655 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 CYP7B1O75881 506 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 SEMA3DO95025 777 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 IFNA14P01570 189 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 SCG5P05408 212 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 TRAPPC2P0DI81 140 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 TRAPPC2BP0DI82 140 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 PIPP12273 146 aaPredicted RBP11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 HMGA1P17096 107 aaKnown RBP11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 PRIM2P49643 509 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 RORCP51449 518 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 RAE1P78406 368 aaKnown RBP11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 RHAGQ02094 409 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 GDPGP1Q6ZNW5 385 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 THOC6Q86W42 341 aaKnown RBP11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 GALNT12Q8IXK2 581 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 SIMC1Q8NDZ2 872 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 NFKBIDQ8NI38 313 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 CLP1Q92989 425 aaKnown RBP11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 OPALINQ96PE5 141 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 BRF2Q9HAW0 419 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 ACER3Q9NUN7 267 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 GNG14A0A1W2PPG7 69 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 HMX3A6NHT5 357 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 ZAR1LA6NP61 321 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 E7EQ34 232 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 H0YIV9 168 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 KPNA5O15131 536 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 ADAM12O43184 909 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 GADD45GO95257 159 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 LATS1O95835 1130 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 ADRA2AP08913 450 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 CBLP22681 906 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 CHMP24386 653 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 RPS19P39019 145 aaKnown RBP11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 XCR1P46094 333 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 RFX2P48378 723 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 MVDP53602 400 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 CRISP1P54107 249 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 CASP9P55211 416 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 RUNX1T1Q06455 604 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 FCHO2Q0JRZ9 810 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 MBTPS1Q14703 1052 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 TAF12Q16514 161 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 COX20Q5RI15 118 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 GRHL2Q6ISB3 625 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 TAS1R1Q7RTX1 841 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 GPR151Q8TDV0 419 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 ASB15Q8WXK1 588 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 UPF1Q92900 1129 aaKnown RBP eCLIP11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 BHMTQ93088 406 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 VPS35Q96QK1 796 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 SGK2Q9HBY8 427 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 HHATLQ9HCP6 504 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 FTSJ1Q9UET6 329 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms