RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 ASZ1Q8WWH4 475 aa11.92□□□□□ -0.5
SHMT2-230ENST00000557427 TM9SF4Q92544 642 aa11.92□□□□□ -0.5
SHMT2-230ENST00000557427 UTP4Q969X6 686 aaKnown RBP11.92□□□□□ -0.5
SHMT2-230ENST00000557427 FAM136AQ96C01 138 aa11.92□□□□□ -0.5
SHMT2-230ENST00000557427 L3HYPDHQ96EM0 354 aa11.92□□□□□ -0.5
SHMT2-230ENST00000557427 C14orf79Q96F83 325 aa11.92□□□□□ -0.5
SHMT2-230ENST00000557427 CCDC28BQ9BUN5 200 aa11.92□□□□□ -0.5
SHMT2-230ENST00000557427 CCDC68Q9H2F9 335 aa11.92□□□□□ -0.5
SHMT2-230ENST00000557427 C1GALT1Q9NS00 363 aa11.92□□□□□ -0.5
SHMT2-230ENST00000557427 ACTR10Q9NZ32 417 aa11.92□□□□□ -0.5
SHMT2-230ENST00000557427 ARMCX1Q9P291 453 aa11.92□□□□□ -0.5
SHMT2-230ENST00000557427 POLG2Q9UHN1 485 aa11.92□□□□□ -0.5
SHMT2-230ENST00000557427 POMT2Q9UKY4 750 aa11.92□□□□□ -0.5
SHMT2-230ENST00000557427 ICKQ9UPZ9 632 aa11.92□□□□□ -0.5
SHMT2-230ENST00000557427 CCDC88CQ9P219 2028 aa11.92□□□□□ -0.5
SHMT2-230ENST00000557427 CNTRLQ7Z7A1 2325 aa11.91□□□□□ -0.5
SHMT2-230ENST00000557427 C2orf74A8MZ97 194 aa11.91□□□□□ -0.5
SHMT2-230ENST00000557427 MAP3K7O43318 606 aa11.91□□□□□ -0.5
SHMT2-230ENST00000557427 CHRNGP07510 517 aa11.91□□□□□ -0.5
SHMT2-230ENST00000557427 PKMP14618 531 aaKnown RBP11.91□□□□□ -0.5
SHMT2-230ENST00000557427 CD1DP15813 335 aa11.91□□□□□ -0.5
SHMT2-230ENST00000557427 ST6GAL1P15907 406 aa11.91□□□□□ -0.5
SHMT2-230ENST00000557427 AOAHP28039 575 aa11.91□□□□□ -0.5
SHMT2-230ENST00000557427 PRDX6P30041 224 aa11.91□□□□□ -0.5
SHMT2-230ENST00000557427 TDGF1P3P51864 188 aa11.91□□□□□ -0.5
SHMT2-230ENST00000557427 FOXL2P58012 376 aa11.91□□□□□ -0.5
SHMT2-230ENST00000557427 ATP6V0D1P61421 351 aa11.91□□□□□ -0.5
SHMT2-230ENST00000557427 CDC16Q13042 620 aa11.91□□□□□ -0.5
SHMT2-230ENST00000557427 PDAP1Q13442 181 aaKnown RBP11.91□□□□□ -0.5
SHMT2-230ENST00000557427 IGFL2Q6UWQ7 119 aa11.91□□□□□ -0.5
SHMT2-230ENST00000557427 TRIM73Q86UV7 250 aa11.91□□□□□ -0.5
SHMT2-230ENST00000557427 RAB43Q86YS6 212 aa11.91□□□□□ -0.5
SHMT2-230ENST00000557427 SYTL1Q8IYJ3 562 aa11.91□□□□□ -0.5
SHMT2-230ENST00000557427 SLC22A15Q8IZD6 547 aa11.91□□□□□ -0.5
SHMT2-230ENST00000557427 CLEC1AQ8NC01 280 aa11.91□□□□□ -0.5
SHMT2-230ENST00000557427 OR5K2Q8NHB8 316 aa11.91□□□□□ -0.5
SHMT2-230ENST00000557427 CLIP3Q96DZ5 547 aa11.91□□□□□ -0.5
SHMT2-230ENST00000557427 FAR2Q96K12 515 aa11.91□□□□□ -0.5
SHMT2-230ENST00000557427 FER1L6-AS2Q96M78 137 aa11.91□□□□□ -0.5
SHMT2-230ENST00000557427 TRMOQ9BU70 441 aa11.91□□□□□ -0.5
SHMT2-230ENST00000557427 DERL2Q9GZP9 239 aa11.91□□□□□ -0.5
SHMT2-230ENST00000557427 P2RY12Q9H244 342 aa11.91□□□□□ -0.5
SHMT2-230ENST00000557427 C1orf21Q9H246 121 aa11.91□□□□□ -0.5
SHMT2-230ENST00000557427 MMADHCQ9H3L0 296 aaPredicted RBP11.91□□□□□ -0.5
SHMT2-230ENST00000557427 GSX1Q9H4S2 264 aaPredicted RBP11.91□□□□□ -0.5
SHMT2-230ENST00000557427 EML4Q9HC35 981 aaKnown RBP11.91□□□□□ -0.5
SHMT2-230ENST00000557427 SPHK1Q9NYA1 384 aa11.91□□□□□ -0.5
SHMT2-230ENST00000557427 TAS2R13Q9NYV9 303 aa11.91□□□□□ -0.5
SHMT2-230ENST00000557427 GNPTGQ9UJJ9 305 aa11.91□□□□□ -0.5
SHMT2-230ENST00000557427 TSR3Q9UJK0 312 aaKnown RBP11.91□□□□□ -0.5
SHMT2-230ENST00000557427 STK38LQ9Y2H1 464 aa11.91□□□□□ -0.5
SHMT2-230ENST00000557427 ISM1B1AKI9 464 aa11.9□□□□□ -0.5
SHMT2-230ENST00000557427 PCDH17O14917 1159 aa11.9□□□□□ -0.5
SHMT2-230ENST00000557427 GYG2O15488 501 aa11.9□□□□□ -0.5
SHMT2-230ENST00000557427 GSC2O15499 205 aa11.9□□□□□ -0.5
SHMT2-230ENST00000557427 SMIM24O75264 130 aa11.9□□□□□ -0.5
SHMT2-230ENST00000557427 VPS26AO75436 327 aa11.9□□□□□ -0.5
SHMT2-230ENST00000557427 GPC4O75487 556 aa11.9□□□□□ -0.5
SHMT2-230ENST00000557427 ENO1P06733 434 aaKnown RBP11.9□□□□□ -0.5
SHMT2-230ENST00000557427 CHRM5P08912 532 aaPredicted RBP11.9□□□□□ -0.5
SHMT2-230ENST00000557427 CHRM3P20309 590 aa11.9□□□□□ -0.5
SHMT2-230ENST00000557427 IMPDH1P20839 514 aa11.9□□□□□ -0.5
SHMT2-230ENST00000557427 SHMT2P34897 504 aa11.9□□□□□ -0.5
SHMT2-230ENST00000557427 PRRC2AP48634 2157 aaKnown RBP11.9□□□□□ -0.5
SHMT2-230ENST00000557427 ART1P52961 327 aa11.9□□□□□ -0.5
SHMT2-230ENST00000557427 TLE4Q04727 773 aa11.9□□□□□ -0.5
SHMT2-230ENST00000557427 CTSL3PQ5NE16 218 aa11.9□□□□□ -0.5
SHMT2-230ENST00000557427 WASHC2DQ5SRD0 308 aa11.9□□□□□ -0.5
SHMT2-230ENST00000557427 ZNF385CQ66K41 422 aaPredicted RBP11.9□□□□□ -0.5
SHMT2-230ENST00000557427 RINLQ6ZS11 566 aa11.9□□□□□ -0.5
SHMT2-230ENST00000557427 FAM20CQ8IXL6 584 aa11.9□□□□□ -0.5
SHMT2-230ENST00000557427 ARHGAP24Q8N264 748 aa11.9□□□□□ -0.5
SHMT2-230ENST00000557427 AFAP1L2Q8N4X5 818 aa11.9□□□□□ -0.5
SHMT2-230ENST00000557427 NKAPQ8N5F7 415 aaKnown RBP11.9□□□□□ -0.5
SHMT2-230ENST00000557427 TEX9Q8N6V9 391 aa11.9□□□□□ -0.5
SHMT2-230ENST00000557427 CCNYL1Q8N7R7 359 aa11.9□□□□□ -0.5
SHMT2-230ENST00000557427 OR8K5Q8NH50 307 aa11.9□□□□□ -0.5
SHMT2-230ENST00000557427 DNAJB14Q8TBM8 379 aa11.9□□□□□ -0.5
SHMT2-230ENST00000557427 PTERQ96BW5 349 aa11.9□□□□□ -0.5
SHMT2-230ENST00000557427 DOCK10Q96BY6 2186 aa11.9□□□□□ -0.5
SHMT2-230ENST00000557427 PANX3Q96QZ0 392 aa11.9□□□□□ -0.5
SHMT2-230ENST00000557427 MIPEPQ99797 713 aa11.9□□□□□ -0.5
SHMT2-230ENST00000557427 CADM1Q9BY67 442 aaKnown RBP11.9□□□□□ -0.5
SHMT2-230ENST00000557427 ALG9Q9H6U8 611 aa11.9□□□□□ -0.5
SHMT2-230ENST00000557427 MCCC2Q9HCC0 563 aa11.9□□□□□ -0.5
SHMT2-230ENST00000557427 TCF7L2Q9NQB0 619 aa11.9□□□□□ -0.5
SHMT2-230ENST00000557427 OLAHQ9NV23 265 aa11.9□□□□□ -0.5
SHMT2-230ENST00000557427 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.9□□□□□ -0.56e-6■■□□□ 12.1
SHMT2-230ENST00000557427 P4HTMQ9NXG6 502 aa11.9□□□□□ -0.5
SHMT2-230ENST00000557427 TAS2R1Q9NYW7 299 aa11.9□□□□□ -0.5
SHMT2-230ENST00000557427 GALPQ9UBC7 116 aa11.9□□□□□ -0.5
SHMT2-230ENST00000557427 ZDHHC2Q9UIJ5 367 aa11.9□□□□□ -0.5
SHMT2-230ENST00000557427 TMCO1Q9UM00 188 aa11.9□□□□□ -0.5
SHMT2-230ENST00000557427 CDYLQ9Y232 598 aa11.9□□□□□ -0.5
SHMT2-230ENST00000557427 MED16Q9Y2X0 877 aa11.9□□□□□ -0.5
SHMT2-230ENST00000557427 TRGV8A0A0C4DH27 118 aa11.89□□□□□ -0.51
SHMT2-230ENST00000557427 TRPC5OSA6NMA1 111 aa11.89□□□□□ -0.51
SHMT2-230ENST00000557427 TMEM150CB9EJG8 249 aa11.89□□□□□ -0.51
SHMT2-230ENST00000557427 CCL21O00585 134 aa11.89□□□□□ -0.51
SHMT2-230ENST00000557427 SLC22A2O15244 555 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms