RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 TYMSOSQ8TAI1 123 aa3.23□□□□□ -1.89
VRK1-207ENST00000557352 FAM71F1Q96KD3 344 aaPredicted RBP3.23□□□□□ -1.89
VRK1-207ENST00000557352 TREX2Q9BQ50 279 aaPredicted RBP3.23□□□□□ -1.89
VRK1-207ENST00000557352 TEX12Q9BXU0 123 aa3.23□□□□□ -1.89
VRK1-207ENST00000557352 TEX13AQ9BXU3 409 aaPredicted RBP3.23□□□□□ -1.89
VRK1-207ENST00000557352 Q9H8V8 135 aa3.23□□□□□ -1.89
VRK1-207ENST00000557352 TBC1D22BQ9NU19 505 aa3.23□□□□□ -1.89
VRK1-207ENST00000557352 HYPKQ9NX55 129 aa3.23□□□□□ -1.89
VRK1-207ENST00000557352 GTSE1Q9NYZ3 720 aa3.23□□□□□ -1.89
VRK1-207ENST00000557352 DBF4Q9UBU7 674 aaPredicted RBP3.23□□□□□ -1.89
VRK1-207ENST00000557352 LNPEPQ9UIQ6 1025 aa3.23□□□□□ -1.89
VRK1-207ENST00000557352 KIAA1551Q9HCM1 1747 aa3.22□□□□□ -1.89
VRK1-207ENST00000557352 NRXN2Q9P2S2 1712 aa3.22□□□□□ -1.89
VRK1-207ENST00000557352 DOCK2Q92608 1830 aa3.22□□□□□ -1.89
VRK1-207ENST00000557352 IGLV4-3A0A075B6K6 122 aa3.22□□□□□ -1.89
VRK1-207ENST00000557352 ENTPD3O75355 529 aa3.22□□□□□ -1.89
VRK1-207ENST00000557352 GJB3O75712 270 aa3.22□□□□□ -1.89
VRK1-207ENST00000557352 HPP00738 406 aa3.22□□□□□ -1.89
VRK1-207ENST00000557352 ATP1B1P05026 303 aa3.22□□□□□ -1.89
VRK1-207ENST00000557352 SAT1P21673 171 aa3.22□□□□□ -1.89
VRK1-207ENST00000557352 HMGB2P26583 209 aaKnown RBP3.22□□□□□ -1.89
VRK1-207ENST00000557352 CD27P26842 260 aa3.22□□□□□ -1.89
VRK1-207ENST00000557352 HOXD13P35453 343 aa3.22□□□□□ -1.89
VRK1-207ENST00000557352 TRA2AQ13595 282 aaKnown RBP eCLIP3.22□□□□□ -1.89
VRK1-207ENST00000557352 SIM2Q14190 667 aaPredicted RBP3.22□□□□□ -1.89
VRK1-207ENST00000557352 SNAPC1Q16533 368 aa3.22□□□□□ -1.89
VRK1-207ENST00000557352 SPECC1Q5M775 1068 aa3.22□□□□□ -1.89
VRK1-207ENST00000557352 MZT2BQ6NZ67 158 aa3.22□□□□□ -1.89
VRK1-207ENST00000557352 FAM198BQ6UWH4 519 aa3.22□□□□□ -1.89
VRK1-207ENST00000557352 CFAP61Q8NHU2 1237 aa3.22□□□□□ -1.89
VRK1-207ENST00000557352 SLC22A18Q96BI1 424 aa3.22□□□□□ -1.89
VRK1-207ENST00000557352 SDF4Q9BRK5 362 aa3.22□□□□□ -1.89
VRK1-207ENST00000557352 GHITMQ9H3K2 345 aa3.22□□□□□ -1.89
VRK1-207ENST00000557352 RWDD1Q9H446 243 aaPredicted RBP3.22□□□□□ -1.89
VRK1-207ENST00000557352 ABCB10Q9NRK6 738 aa3.22□□□□□ -1.89
VRK1-207ENST00000557352 BLOC1S4Q9NUP1 217 aa3.22□□□□□ -1.89
VRK1-207ENST00000557352 GIMAP4Q9NUV9 329 aa3.22□□□□□ -1.89
VRK1-207ENST00000557352 PRMT7Q9NVM4 692 aaPredicted RBP3.22□□□□□ -1.89
VRK1-207ENST00000557352 GDE1Q9NZC3 331 aa3.22□□□□□ -1.89
VRK1-207ENST00000557352 SELENOKQ9Y6D0 94 aa3.22□□□□□ -1.89
VRK1-207ENST00000557352 ADCY9O60503 1353 aa3.22□□□□□ -1.89
VRK1-207ENST00000557352 LRP5O75197 1615 aa3.22□□□□□ -1.89
VRK1-207ENST00000557352 MYO5AQ9Y4I1 1855 aaKnown RBP3.22□□□□□ -1.89
VRK1-207ENST00000557352 DLEC1Q9Y238 1755 aa3.21□□□□□ -1.9
VRK1-207ENST00000557352 TRBV4-1A0A0J9YWV2 114 aa3.21□□□□□ -1.9
VRK1-207ENST00000557352 FSD2A1L4K1 749 aa3.21□□□□□ -1.9
VRK1-207ENST00000557352 RTL8CO15255 209 aa3.21□□□□□ -1.9
VRK1-207ENST00000557352 NXPH4O95158 308 aa3.21□□□□□ -1.9
VRK1-207ENST00000557352 RAB40ALP0C0E4 278 aa3.21□□□□□ -1.9
VRK1-207ENST00000557352 CSH1P0DML2 217 aa3.21□□□□□ -1.9
VRK1-207ENST00000557352 CSH2P0DML3 217 aa3.21□□□□□ -1.9
VRK1-207ENST00000557352 ZNF75DP51815 510 aa3.21□□□□□ -1.9
VRK1-207ENST00000557352 TRAP1Q12931 704 aaKnown RBP3.21□□□□□ -1.9
VRK1-207ENST00000557352 BAATQ14032 418 aaPredicted RBP3.21□□□□□ -1.9
VRK1-207ENST00000557352 NTRK2Q16620 822 aa3.21□□□□□ -1.9
VRK1-207ENST00000557352 OR4A47Q6IF82 309 aa3.21□□□□□ -1.9
VRK1-207ENST00000557352 C3P1Q6ZMU1 363 aa3.21□□□□□ -1.9
VRK1-207ENST00000557352 FCRLAQ7L513 359 aa3.21□□□□□ -1.9
VRK1-207ENST00000557352 ITPRIPQ8IWB1 547 aa3.21□□□□□ -1.9
VRK1-207ENST00000557352 TTC5Q8N0Z6 440 aa3.21□□□□□ -1.9
VRK1-207ENST00000557352 ATL1Q8WXF7 558 aa3.21□□□□□ -1.9
VRK1-207ENST00000557352 FRAT1Q92837 279 aaPredicted RBP3.21□□□□□ -1.9
VRK1-207ENST00000557352 CALML4Q96GE6 196 aa3.21□□□□□ -1.9
VRK1-207ENST00000557352 PSMB7Q99436 277 aa3.21□□□□□ -1.9
VRK1-207ENST00000557352 ATF6BQ99941 703 aa3.21□□□□□ -1.9
VRK1-207ENST00000557352 GOLPH3LQ9H4A5 285 aa3.21□□□□□ -1.9
VRK1-207ENST00000557352 HAUS2Q9NVX0 235 aa3.21□□□□□ -1.9
VRK1-207ENST00000557352 TMOD3Q9NYL9 352 aa3.21□□□□□ -1.9
VRK1-207ENST00000557352 PRDM4Q9UKN5 801 aa3.21□□□□□ -1.9
VRK1-207ENST00000557352 CELA1Q9UNI1 258 aa3.21□□□□□ -1.9
VRK1-207ENST00000557352 PSME4Q14997 1843 aa3.21□□□□□ -1.9
VRK1-207ENST00000557352 KIF13BQ9NQT8 1826 aa3.21□□□□□ -1.9
VRK1-207ENST00000557352 ZNF840PA6NDX5 716 aa3.2□□□□□ -1.9
VRK1-207ENST00000557352 C2CD4DB7Z1M9 353 aa3.2□□□□□ -1.9
VRK1-207ENST00000557352 PHF1O43189 567 aaPredicted RBP3.2□□□□□ -1.9
VRK1-207ENST00000557352 HMMRO75330 724 aa3.2□□□□□ -1.9
VRK1-207ENST00000557352 TSPAN9O75954 239 aa3.2□□□□□ -1.9
VRK1-207ENST00000557352 LINGO3P0C6S8 592 aa3.2□□□□□ -1.9
VRK1-207ENST00000557352 MYOGP15173 224 aa3.2□□□□□ -1.9
VRK1-207ENST00000557352 EPS8Q12929 822 aa3.2□□□□□ -1.9
VRK1-207ENST00000557352 FAM182AQ5T1J6 154 aa3.2□□□□□ -1.9
VRK1-207ENST00000557352 BEND3Q5T5X7 828 aa3.2□□□□□ -1.9
VRK1-207ENST00000557352 VITQ6UXI7 678 aa3.2□□□□□ -1.9
VRK1-207ENST00000557352 IL17RELQ6ZVW7 336 aa3.2□□□□□ -1.9
VRK1-207ENST00000557352 KRTAP11-1Q8IUC1 163 aa3.2□□□□□ -1.9
VRK1-207ENST00000557352 GPD1LQ8N335 351 aa3.2□□□□□ -1.9
VRK1-207ENST00000557352 APPL2Q8NEU8 664 aa3.2□□□□□ -1.9
VRK1-207ENST00000557352 OR10G7Q8NGN6 311 aa3.2□□□□□ -1.9
VRK1-207ENST00000557352 PRPF31Q8WWY3 499 aaKnown RBP3.2□□□□□ -1.9
VRK1-207ENST00000557352 PIK3R3Q92569 461 aa3.2□□□□□ -1.9
VRK1-207ENST00000557352 PTERQ96BW5 349 aa3.2□□□□□ -1.9
VRK1-207ENST00000557352 TMCO6Q96DC7 493 aa3.2□□□□□ -1.9
VRK1-207ENST00000557352 BARD1Q99728 777 aaKnown RBP3.2□□□□□ -1.9
VRK1-207ENST00000557352 MRPL1Q9BYD6 325 aaKnown RBP3.2□□□□□ -1.9
VRK1-207ENST00000557352 ADNPQ9H2P0 1102 aa3.2□□□□□ -1.9
VRK1-207ENST00000557352 DCTPP1Q9H773 170 aa3.2□□□□□ -1.9
VRK1-207ENST00000557352 MIS18AQ9NYP9 233 aa3.2□□□□□ -1.9
VRK1-207ENST00000557352 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.2□□□□□ -1.9
VRK1-207ENST00000557352 ELF5Q9UKW6 265 aaPredicted RBP3.2□□□□□ -1.9
VRK1-207ENST00000557352 RNF150Q9ULK6 438 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms