RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 CARD6Q9BX69 1037 aa11.54□□□□□ -0.56
PSEN1-220ENST00000557037 NDRG3Q9UGV2 375 aa11.54□□□□□ -0.56
PSEN1-220ENST00000557037 ZNF223Q9UK11 482 aaPredicted RBP11.54□□□□□ -0.56
PSEN1-220ENST00000557037 TESMINQ9Y4I5 508 aa11.54□□□□□ -0.56
PSEN1-220ENST00000557037 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.54□□□□□ -0.56
PSEN1-220ENST00000557037 RAI1Q7Z5J4 1906 aaPredicted RBP11.53□□□□□ -0.56
PSEN1-220ENST00000557037 AHRRA9YTQ3 701 aa11.53□□□□□ -0.56
PSEN1-220ENST00000557037 F8W8V4 182 aa11.53□□□□□ -0.56
PSEN1-220ENST00000557037 H7BY64 318 aa11.53□□□□□ -0.56
PSEN1-220ENST00000557037 CTIFO43310 598 aaKnown RBP11.53□□□□□ -0.56
PSEN1-220ENST00000557037 CHST10O43529 356 aa11.53□□□□□ -0.56
PSEN1-220ENST00000557037 CST8O60676 142 aa11.53□□□□□ -0.56
PSEN1-220ENST00000557037 MYO1DO94832 1006 aa11.53□□□□□ -0.56
PSEN1-220ENST00000557037 CCNDBP1O95273 360 aa11.53□□□□□ -0.56
PSEN1-220ENST00000557037 RFPL3SP0C7P2 107 aa11.53□□□□□ -0.56
PSEN1-220ENST00000557037 TNNT1P13805 278 aa11.53□□□□□ -0.56
PSEN1-220ENST00000557037 IL10P22301 178 aa11.53□□□□□ -0.56
PSEN1-220ENST00000557037 CYLC1P35663 651 aaPredicted RBP11.53□□□□□ -0.56
PSEN1-220ENST00000557037 CCNFP41002 786 aa11.53□□□□□ -0.56
PSEN1-220ENST00000557037 HYAL4Q2M3T9 481 aa11.53□□□□□ -0.56
PSEN1-220ENST00000557037 ITPRIPL1Q6GPH6 555 aa11.53□□□□□ -0.56
PSEN1-220ENST00000557037 GPALPP1Q8IXQ4 340 aa11.53□□□□□ -0.56
PSEN1-220ENST00000557037 PPFIBP2Q8ND30 876 aa11.53□□□□□ -0.56
PSEN1-220ENST00000557037 B3GNT7Q8NFL0 401 aa11.53□□□□□ -0.56
PSEN1-220ENST00000557037 TMEM171Q8WVE6 324 aa11.53□□□□□ -0.56
PSEN1-220ENST00000557037 NCLNQ969V3 563 aa11.53□□□□□ -0.56
PSEN1-220ENST00000557037 HSPBAP1Q96EW2 488 aa11.53□□□□□ -0.56
PSEN1-220ENST00000557037 PRAP1Q96NZ9 151 aa11.53□□□□□ -0.56
PSEN1-220ENST00000557037 QKIQ96PU8 341 aaKnown RBP eCLIP11.53□□□□□ -0.56
PSEN1-220ENST00000557037 ALS2CR12Q96Q35 445 aa11.53□□□□□ -0.56
PSEN1-220ENST00000557037 TSSK1BQ9BXA7 367 aa11.53□□□□□ -0.56
PSEN1-220ENST00000557037 ZNF701Q9NV72 531 aaPredicted RBP11.53□□□□□ -0.56
PSEN1-220ENST00000557037 PIH1D1Q9NWS0 290 aaKnown RBP11.53□□□□□ -0.56
PSEN1-220ENST00000557037 KLHL28Q9NXS3 571 aa11.53□□□□□ -0.56
PSEN1-220ENST00000557037 WIF1Q9Y5W5 379 aa11.53□□□□□ -0.56
PSEN1-220ENST00000557037 C15orf38-AP3S2A0A0A6YYH1 394 aa11.52□□□□□ -0.57
PSEN1-220ENST00000557037 WWP2O00308 870 aa11.52□□□□□ -0.57
PSEN1-220ENST00000557037 ERN1O75460 977 aaKnown RBP11.52□□□□□ -0.57
PSEN1-220ENST00000557037 B3GALT4O96024 378 aa11.52□□□□□ -0.57
PSEN1-220ENST00000557037 PAX1P15863 534 aa11.52□□□□□ -0.57
PSEN1-220ENST00000557037 RELAQ04206 551 aa11.52□□□□□ -0.57
PSEN1-220ENST00000557037 NFKBIBQ15653 356 aa11.52□□□□□ -0.57
PSEN1-220ENST00000557037 ODF2Q5BJF6 829 aa11.52□□□□□ -0.57
PSEN1-220ENST00000557037 RNF187Q5TA31 235 aaPredicted RBP11.52□□□□□ -0.57
PSEN1-220ENST00000557037 MEI1Q5TIA1 1274 aa11.52□□□□□ -0.57
PSEN1-220ENST00000557037 RTL4Q6ZR62 310 aa11.52□□□□□ -0.57
PSEN1-220ENST00000557037 VSIG1Q86XK7 387 aa11.52□□□□□ -0.57
PSEN1-220ENST00000557037 LIX1Q8N485 282 aa11.52□□□□□ -0.57
PSEN1-220ENST00000557037 OR9A1PQ8NGU1 263 aa11.52□□□□□ -0.57
PSEN1-220ENST00000557037 NEIL3Q8TAT5 605 aa11.52□□□□□ -0.57
PSEN1-220ENST00000557037 STYXQ8WUJ0 223 aa11.52□□□□□ -0.57
PSEN1-220ENST00000557037 IGFBPL1Q8WX77 278 aa11.52□□□□□ -0.57
PSEN1-220ENST00000557037 SCYL1Q96KG9 808 aa11.52□□□□□ -0.57
PSEN1-220ENST00000557037 FOPNLQ96NB1 174 aa11.52□□□□□ -0.57
PSEN1-220ENST00000557037 WFIKKN1Q96NZ8 548 aa11.52□□□□□ -0.57
PSEN1-220ENST00000557037 TRIB1Q96RU8 372 aa11.52□□□□□ -0.57
PSEN1-220ENST00000557037 CCDC77Q9BR77 488 aa11.52□□□□□ -0.57
PSEN1-220ENST00000557037 AARSD1Q9BTE6 412 aaKnown RBP11.52□□□□□ -0.57
PSEN1-220ENST00000557037 NECTIN3Q9NQS3 549 aa11.52□□□□□ -0.57
PSEN1-220ENST00000557037 SACM1LQ9NTJ5 587 aa11.52□□□□□ -0.57
PSEN1-220ENST00000557037 SAMD15Q9P1V8 674 aa11.52□□□□□ -0.57
PSEN1-220ENST00000557037 AAR2Q9Y312 384 aaKnown RBP11.52□□□□□ -0.57
PSEN1-220ENST00000557037 PCDHGB3Q9Y5G1 929 aa11.52□□□□□ -0.57
PSEN1-220ENST00000557037 FREM1Q5H8C1 2179 aa11.52□□□□□ -0.57
PSEN1-220ENST00000557037 MED12Q93074 2177 aa11.52□□□□□ -0.57
PSEN1-220ENST00000557037 TCRBV16S1A1N1A0A5B0 115 aa11.51□□□□□ -0.57
PSEN1-220ENST00000557037 SNPHO15079 494 aa11.51□□□□□ -0.57
PSEN1-220ENST00000557037 CCL3P10147 92 aa11.51□□□□□ -0.57
PSEN1-220ENST00000557037 ERGP11308 486 aa11.51□□□□□ -0.57
PSEN1-220ENST00000557037 JAK1P23458 1154 aa11.51□□□□□ -0.57
PSEN1-220ENST00000557037 CFPP27918 469 aa11.51□□□□□ -0.57
PSEN1-220ENST00000557037 RBL1P28749 1068 aa11.51□□□□□ -0.57
PSEN1-220ENST00000557037 SOX18P35713 384 aa11.51□□□□□ -0.57
PSEN1-220ENST00000557037 PIGAP37287 484 aa11.51□□□□□ -0.57
PSEN1-220ENST00000557037 FOXF2Q12947 444 aa11.51□□□□□ -0.57
PSEN1-220ENST00000557037 PRPSAP1Q14558 356 aa11.51□□□□□ -0.57
PSEN1-220ENST00000557037 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.51□□□□□ -0.57
PSEN1-220ENST00000557037 NSUN5P2Q63ZY6 315 aa11.51□□□□□ -0.57
PSEN1-220ENST00000557037 APTXQ7Z2E3 356 aaKnown RBP11.51□□□□□ -0.57
PSEN1-220ENST00000557037 SLC26A11Q86WA9 606 aa11.51□□□□□ -0.57
PSEN1-220ENST00000557037 MAGEC3Q8TD91 643 aa11.51□□□□□ -0.57
PSEN1-220ENST00000557037 P3H4Q92791 437 aa11.51□□□□□ -0.57
PSEN1-220ENST00000557037 VMP1Q96GC9 406 aa11.51□□□□□ -0.57
PSEN1-220ENST00000557037 RASL10BQ96S79 203 aa11.51□□□□□ -0.57
PSEN1-220ENST00000557037 CXorf56Q9H5V9 222 aa11.51□□□□□ -0.57
PSEN1-220ENST00000557037 PNO1Q9NRX1 252 aaKnown RBP11.51□□□□□ -0.57
PSEN1-220ENST00000557037 CAMK2AQ9UQM7 478 aa11.51□□□□□ -0.57
PSEN1-220ENST00000557037 ATG4BQ9Y4P1 393 aa11.51□□□□□ -0.57
PSEN1-220ENST00000557037 MRFAP1Q9Y605 127 aa11.51□□□□□ -0.57
PSEN1-220ENST00000557037 NINQ8N4C6 2090 aa11.51□□□□□ -0.57
PSEN1-220ENST00000557037 A0A087X0T9 212 aa11.5□□□□□ -0.57
PSEN1-220ENST00000557037 SMAPO00193 183 aa11.5□□□□□ -0.57
PSEN1-220ENST00000557037 GPRIN2O60269 458 aa11.5□□□□□ -0.57
PSEN1-220ENST00000557037 KIF5CO60282 957 aa11.5□□□□□ -0.57
PSEN1-220ENST00000557037 ZFAND5O76080 213 aa11.5□□□□□ -0.57
PSEN1-220ENST00000557037 IL18BPO95998 194 aa11.5□□□□□ -0.57
PSEN1-220ENST00000557037 P04436 131 aa11.5□□□□□ -0.57
PSEN1-220ENST00000557037 FAM228BP0C875 321 aa11.5□□□□□ -0.57
PSEN1-220ENST00000557037 TMIGD3P0DMS9 266 aaPredicted RBP11.5□□□□□ -0.57
PSEN1-220ENST00000557037 CPOXP36551 454 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms