RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 LAMP2P13473 410 aa14.48□□□□□ -0.09
ARHGEF40-207ENST00000556399 ACSL1P33121 698 aa14.48□□□□□ -0.09
ARHGEF40-207ENST00000556399 CXCR4P61073 352 aa14.48□□□□□ -0.09
ARHGEF40-207ENST00000556399 RGS1Q08116 209 aa14.48□□□□□ -0.09
ARHGEF40-207ENST00000556399 MSANTD1Q6ZTZ1 278 aa14.48□□□□□ -0.09
ARHGEF40-207ENST00000556399 SERINC5Q86VE9 423 aa14.48□□□□□ -0.09
ARHGEF40-207ENST00000556399 ZNF548Q8NEK5 533 aaPredicted RBP14.48□□□□□ -0.09
ARHGEF40-207ENST00000556399 RHOXF1Q8NHV9 184 aa14.48□□□□□ -0.09
ARHGEF40-207ENST00000556399 OR51E2Q9H255 320 aa14.48□□□□□ -0.09
ARHGEF40-207ENST00000556399 OR51V1Q9H2C8 321 aa14.48□□□□□ -0.09
ARHGEF40-207ENST00000556399 TNFRSF12AQ9NP84 129 aa14.48□□□□□ -0.09
ARHGEF40-207ENST00000556399 B4GALT6Q9UBX8 382 aa14.48□□□□□ -0.09
ARHGEF40-207ENST00000556399 ABCG2Q9UNQ0 655 aa14.48□□□□□ -0.09
ARHGEF40-207ENST00000556399 HLA-DPB1P04440 258 aa14.48□□□□□ -0.09
ARHGEF40-207ENST00000556399 AVPR1BP47901 424 aa14.48□□□□□ -0.09
ARHGEF40-207ENST00000556399 NCBP2P52298 156 aaKnown RBP eCLIP14.48□□□□□ -0.09
ARHGEF40-207ENST00000556399 RBBP4Q09028 425 aa14.48□□□□□ -0.09
ARHGEF40-207ENST00000556399 KCNC3Q14003 757 aa14.48□□□□□ -0.09
ARHGEF40-207ENST00000556399 ADNP2Q6IQ32 1131 aa14.48□□□□□ -0.09
ARHGEF40-207ENST00000556399 RAB8BQ92930 207 aa14.48□□□□□ -0.09
ARHGEF40-207ENST00000556399 ZSCAN5AQ9BUG6 496 aa14.48□□□□□ -0.09
ARHGEF40-207ENST00000556399 CROCCQ5TZA2 2017 aa14.48□□□□□ -0.09
ARHGEF40-207ENST00000556399 DAPL1A0PJW8 107 aa14.48□□□□□ -0.09
ARHGEF40-207ENST00000556399 RIIAD1A6NNX1 92 aa14.48□□□□□ -0.09
ARHGEF40-207ENST00000556399 SOCS5O75159 536 aa14.48□□□□□ -0.09
ARHGEF40-207ENST00000556399 CH25HO95992 272 aa14.48□□□□□ -0.09
ARHGEF40-207ENST00000556399 CAPZA2P47755 286 aa14.48□□□□□ -0.09
ARHGEF40-207ENST00000556399 HNRNPFP52597 415 aaKnown RBP14.48□□□□□ -0.09
ARHGEF40-207ENST00000556399 SF1Q15637 639 aaKnown RBP14.48□□□□□ -0.09
ARHGEF40-207ENST00000556399 PRAMEF14Q5SWL7 426 aa14.48□□□□□ -0.09
ARHGEF40-207ENST00000556399 ZNF648Q5T619 568 aaPredicted RBP14.48□□□□□ -0.09
ARHGEF40-207ENST00000556399 PRAMEF13Q5VWM6 474 aa14.48□□□□□ -0.09
ARHGEF40-207ENST00000556399 SMG7Q92540 1137 aaKnown RBP14.48□□□□□ -0.09
ARHGEF40-207ENST00000556399 RETREG1Q9H6L5 497 aa14.48□□□□□ -0.09
ARHGEF40-207ENST00000556399 EIF3KQ9UBQ5 218 aaKnown RBP14.48□□□□□ -0.09
ARHGEF40-207ENST00000556399 CPSF4LA6NMK7 179 aaKnown RBP14.48□□□□□ -0.09
ARHGEF40-207ENST00000556399 FAM155AB1AL88 458 aaPredicted RBP14.48□□□□□ -0.09
ARHGEF40-207ENST00000556399 GPR39O43194 453 aa14.48□□□□□ -0.09
ARHGEF40-207ENST00000556399 CPN2P22792 545 aa14.48□□□□□ -0.09
ARHGEF40-207ENST00000556399 PSMD8P48556 350 aa14.48□□□□□ -0.09
ARHGEF40-207ENST00000556399 ADAM15Q13444 863 aa14.48□□□□□ -0.09
ARHGEF40-207ENST00000556399 SPNS2Q8IVW8 549 aa14.48□□□□□ -0.09
ARHGEF40-207ENST00000556399 BPIFB1Q8TDL5 484 aa14.48□□□□□ -0.09
ARHGEF40-207ENST00000556399 GPR62Q9BZJ7 368 aa14.48□□□□□ -0.09
ARHGEF40-207ENST00000556399 RACGAP1Q9H0H5 632 aa14.48□□□□□ -0.09
ARHGEF40-207ENST00000556399 CALML5Q9NZT1 146 aa14.48□□□□□ -0.09
ARHGEF40-207ENST00000556399 GSAPA4D1B5 854 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 GLTPD2A6NH11 291 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 K7ERQ8 282 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 JRKO75564 520 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 ETFAP13804 333 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 JUNBP17275 347 aaPredicted RBP14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 TIA1P31483 386 aaKnown RBP eCLIP14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 ARL4DP49703 201 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 PCDH1Q08174 1060 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 DOC2AQ14183 400 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 ZNHIT3Q15649 155 aaPredicted RBP14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 BTBD16Q32M84 506 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 NUDT13Q86X67 352 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 POF1BQ8WVV4 589 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 CAMK1GQ96NX5 476 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 SLC2A11Q9BYW1 496 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 IL17CQ9P0M4 197 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 NME7Q9Y5B8 376 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 CCL16O15467 120 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 DNTTP04053 509 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 IL7P13232 177 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 CA5AP35218 305 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 ARSIQ5FYB1 569 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 ATAT1Q5SQI0 421 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 Q6ZSR9 355 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 ERVW-1Q9UQF0 538 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 OAZ2O95190 189 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 APOL3O95236 402 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 RLN1P04808 185 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 BPIP17213 487 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 SDC1P18827 310 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 MEF2AQ02078 507 aaPredicted RBP14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 HSF2Q03933 536 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 FADDQ13158 208 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 DENND6BQ8NEG7 585 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 MROQ9BYG7 248 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 CLMPQ9H6B4 373 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 NCKAP1Q9Y2A7 1128 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 SCAMP2O15127 329 aaKnown RBP14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 ALPPP05187 535 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 RB1P06400 928 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 C21orf33P30042 268 aaPredicted RBP14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 CDH11P55287 796 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 FPGSQ05932 587 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 CBLBQ13191 982 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 GINS1Q14691 196 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 CTSL3PQ5NE16 218 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 TPGS2Q68CL5 300 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 C22orf42Q6IC83 251 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 FAM217AQ8IXS0 508 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 CMTM8Q8IZV2 173 aa14.47□□□□□ -0.09
ARHGEF40-207ENST00000556399 LMAN2LQ9H0V9 348 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms