RNA–Protein interactions for RNA: ENST00000556210.1

CUX1-215, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-215ENST00000556210 J3KTA2 159 aa14.28□□□□□ -0.12
CUX1-215ENST00000556210 QSOX1O00391 747 aa14.28□□□□□ -0.12
CUX1-215ENST00000556210 ADAM23O75077 832 aa14.28□□□□□ -0.12
CUX1-215ENST00000556210 ZNF805Q5CZA5 627 aa14.28□□□□□ -0.12
CUX1-215ENST00000556210 SDE2Q6IQ49 451 aa14.28□□□□□ -0.12
CUX1-215ENST00000556210 COMMD6Q7Z4G1 85 aa14.28□□□□□ -0.12
CUX1-215ENST00000556210 GALNT7Q86SF2 657 aa14.28□□□□□ -0.12
CUX1-215ENST00000556210 BTN2A2Q8WVV5 523 aa14.28□□□□□ -0.12
CUX1-215ENST00000556210 MYDGFQ969H8 173 aa14.28□□□□□ -0.12
CUX1-215ENST00000556210 AIF1LQ9BQI0 150 aa14.28□□□□□ -0.12
CUX1-215ENST00000556210 CNPPD1Q9BV87 410 aa14.28□□□□□ -0.12
CUX1-215ENST00000556210 CARS2Q9HA77 564 aaKnown RBP14.28□□□□□ -0.12
CUX1-215ENST00000556210 KCNK12Q9HB15 430 aa14.28□□□□□ -0.12
CUX1-215ENST00000556210 MALT1Q9UDY8 824 aa14.28□□□□□ -0.12
CUX1-215ENST00000556210 CDH7Q9ULB5 785 aa14.28□□□□□ -0.12
CUX1-215ENST00000556210 NPPAP01160 153 aa14.28□□□□□ -0.12
CUX1-215ENST00000556210 HTR1BP28222 390 aa14.28□□□□□ -0.12
CUX1-215ENST00000556210 EIF4EBP2Q13542 120 aaPredicted RBP14.28□□□□□ -0.12
CUX1-215ENST00000556210 DHCR24Q15392 516 aa14.28□□□□□ -0.12
CUX1-215ENST00000556210 ATG9BQ674R7 924 aa14.28□□□□□ -0.12
CUX1-215ENST00000556210 VITQ6UXI7 678 aa14.28□□□□□ -0.12
CUX1-215ENST00000556210 ACTL8Q9H568 366 aa14.28□□□□□ -0.12
CUX1-215ENST00000556210 MKI67P46013 3256 aaKnown RBP14.28□□□□□ -0.12
CUX1-215ENST00000556210 PIPSLA2A3N6 862 aa14.27□□□□□ -0.12
CUX1-215ENST00000556210 FAM227AF5H4B4 570 aa14.27□□□□□ -0.12
CUX1-215ENST00000556210 K7ESM1 405 aa14.27□□□□□ -0.12
CUX1-215ENST00000556210 AMD1P17707 334 aa14.27□□□□□ -0.12
CUX1-215ENST00000556210 PSMB5P28074 263 aa14.27□□□□□ -0.12
CUX1-215ENST00000556210 CCR2P41597 374 aa14.27□□□□□ -0.12
CUX1-215ENST00000556210 SLC6A11P48066 632 aa14.27□□□□□ -0.12
CUX1-215ENST00000556210 WDR5P61964 334 aaKnown RBP14.27□□□□□ -0.12
CUX1-215ENST00000556210 ID2Q02363 134 aa14.27□□□□□ -0.12
CUX1-215ENST00000556210 GSTM4Q03013 218 aa14.27□□□□□ -0.12
CUX1-215ENST00000556210 ARMCX4Q5H9R4 360 aa14.27□□□□□ -0.12
CUX1-215ENST00000556210 COQ5Q5HYK3 327 aa14.27□□□□□ -0.12
CUX1-215ENST00000556210 DHRS4L2Q6PKH6 230 aa14.27□□□□□ -0.12
CUX1-215ENST00000556210 TMEM179BQ7Z7N9 219 aa14.27□□□□□ -0.12
CUX1-215ENST00000556210 PARGQ86W56 976 aa14.27□□□□□ -0.12
CUX1-215ENST00000556210 GHDCQ8N2G8 530 aa14.27□□□□□ -0.12
CUX1-215ENST00000556210 HDDC3Q8N4P3 179 aa14.27□□□□□ -0.12
CUX1-215ENST00000556210 SLC5A8Q8N695 610 aa14.27□□□□□ -0.12
CUX1-215ENST00000556210 C1GALT1C1Q96EU7 318 aa14.27□□□□□ -0.12
CUX1-215ENST00000556210 NRTNQ99748 197 aa14.27□□□□□ -0.12
CUX1-215ENST00000556210 GPR83Q9NYM4 423 aa14.27□□□□□ -0.12
CUX1-215ENST00000556210 IL20RAQ9UHF4 553 aa14.27□□□□□ -0.12
CUX1-215ENST00000556210 PPT2Q9UMR5 302 aa14.27□□□□□ -0.12
CUX1-215ENST00000556210 PARP14Q460N5 1801 aa14.27□□□□□ -0.12
CUX1-215ENST00000556210 ABLIM3O94929 683 aa14.27□□□□□ -0.12
CUX1-215ENST00000556210 CBSLP0DN79 551 aa14.27□□□□□ -0.12
CUX1-215ENST00000556210 GTF2E2P29084 291 aaKnown RBP14.27□□□□□ -0.12
CUX1-215ENST00000556210 IDUAP35475 653 aa14.27□□□□□ -0.12
CUX1-215ENST00000556210 CBSP35520 551 aa14.27□□□□□ -0.12
CUX1-215ENST00000556210 CD300CQ08708 224 aa14.27□□□□□ -0.12
CUX1-215ENST00000556210 SLC14A1Q13336 389 aa14.27□□□□□ -0.12
CUX1-215ENST00000556210 ZDHHC20Q5W0Z9 365 aa14.27□□□□□ -0.12
CUX1-215ENST00000556210 ZNF783Q6ZMS7 281 aa14.27□□□□□ -0.12
CUX1-215ENST00000556210 C7orf61Q8IZ16 206 aa14.27□□□□□ -0.12
CUX1-215ENST00000556210 CHDHQ8NE62 594 aaPredicted RBP14.27□□□□□ -0.12
CUX1-215ENST00000556210 UBASH3BQ8TF42 649 aa14.27□□□□□ -0.12
CUX1-215ENST00000556210 DMRTB1Q96MA1 342 aa14.27□□□□□ -0.12
CUX1-215ENST00000556210 CLMPQ9H6B4 373 aa14.27□□□□□ -0.12
CUX1-215ENST00000556210 MYOFQ9NZM1 2061 aa14.27□□□□□ -0.13
CUX1-215ENST00000556210 SLC35F4A4IF30 521 aa14.27□□□□□ -0.13
CUX1-215ENST00000556210 ADAMDEC1O15204 470 aa14.27□□□□□ -0.13
CUX1-215ENST00000556210 CDK5R2Q13319 367 aa14.27□□□□□ -0.13
CUX1-215ENST00000556210 LASP1Q14847 261 aaKnown RBP14.27□□□□□ -0.13
CUX1-215ENST00000556210 EXOC3L2Q2M3D2 409 aa14.27□□□□□ -0.13
CUX1-215ENST00000556210 KIAA1614Q5VZ46 1190 aa14.27□□□□□ -0.13
CUX1-215ENST00000556210 THOC7Q6I9Y2 204 aaKnown RBP14.27□□□□□ -0.13
CUX1-215ENST00000556210 SMARCD3Q6STE5 483 aa14.27□□□□□ -0.13
CUX1-215ENST00000556210 C16orf62Q7Z3J2 963 aa14.27□□□□□ -0.13
CUX1-215ENST00000556210 MMP21Q8N119 569 aa14.27□□□□□ -0.13
CUX1-215ENST00000556210 MINDY2Q8NBR6 621 aa14.27□□□□□ -0.13
CUX1-215ENST00000556210 LGALS12Q96DT0 336 aa14.27□□□□□ -0.13
CUX1-215ENST00000556210 MTERF3Q96E29 417 aa14.27□□□□□ -0.13
CUX1-215ENST00000556210 MTIF3Q9H2K0 278 aaKnown RBP14.27□□□□□ -0.13
CUX1-215ENST00000556210 RAD18Q9NS91 495 aa14.27□□□□□ -0.13
CUX1-215ENST00000556210 CLEC4AQ9UMR7 237 aa14.27□□□□□ -0.13
CUX1-215ENST00000556210 ANK1P16157 1881 aa14.27□□□□□ -0.13
CUX1-215ENST00000556210 CENPXA8MT69 81 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 LOC110117498-PIK3R3F6TDL0 507 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 PI15O43692 258 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 GMFGO60234 142 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 AVPR1BP47901 424 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 CBLBQ13191 982 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 C1DQ13901 141 aaKnown RBP14.26□□□□□ -0.13
CUX1-215ENST00000556210 KRT73Q86Y46 540 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 TBC1D19Q8N5T2 526 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 KBTBD8Q8NFY9 601 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 SLC5A11Q8WWX8 675 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 CWH43Q9H720 699 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 SLC9A8Q9Y2E8 581 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 INSL6Q9Y581 213 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 PAPPA2Q9BXP8 1791 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 IGLON5A6NGN9 336 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 ERI3O43414 337 aaKnown RBP14.26□□□□□ -0.13
CUX1-215ENST00000556210 TSPAN19P0C672 248 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 ITGA2P17301 1181 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 NTSP30990 170 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 RYKP34925 604 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms