RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 GABRR3A8MPY1 467 aa11.91□□□□□ -0.5
HNRNPC-221ENST00000555883 PSMD12O00232 456 aaPredicted RBP11.91□□□□□ -0.5
HNRNPC-221ENST00000555883 EIF3HO15372 352 aaKnown RBP eCLIP11.91□□□□□ -0.5
HNRNPC-221ENST00000555883 HNRNPRO43390 633 aaKnown RBP11.91□□□□□ -0.5
HNRNPC-221ENST00000555883 NEURL1O76050 574 aa11.91□□□□□ -0.5
HNRNPC-221ENST00000555883 WISP3O95389 354 aaPredicted RBP11.91□□□□□ -0.5
HNRNPC-221ENST00000555883 EEF1DP29692 281 aaKnown RBP11.91□□□□□ -0.5
HNRNPC-221ENST00000555883 TRHRP34981 398 aaPredicted RBP11.91□□□□□ -0.5
HNRNPC-221ENST00000555883 PGGT1BP53609 377 aa11.91□□□□□ -0.5
HNRNPC-221ENST00000555883 FASTKD3Q14CZ7 662 aaKnown RBP11.91□□□□□ -0.5
HNRNPC-221ENST00000555883 TGFBIQ15582 683 aa11.91□□□□□ -0.5
HNRNPC-221ENST00000555883 C1QL3Q5VWW1 255 aa11.91□□□□□ -0.5
HNRNPC-221ENST00000555883 FCRLBQ6BAA4 426 aa11.91□□□□□ -0.5
HNRNPC-221ENST00000555883 SLCO4C1Q6ZQN7 724 aa11.91□□□□□ -0.5
HNRNPC-221ENST00000555883 FRA10AC1Q70Z53 315 aa11.91□□□□□ -0.5
HNRNPC-221ENST00000555883 ANKMY2Q8IV38 441 aa11.91□□□□□ -0.5
HNRNPC-221ENST00000555883 FAM98AQ8NCA5 519 aaKnown RBP11.91□□□□□ -0.5
HNRNPC-221ENST00000555883 ARMC2Q8NEN0 867 aa11.91□□□□□ -0.5
HNRNPC-221ENST00000555883 ADAMTS18Q8TE60 1221 aa11.91□□□□□ -0.5
HNRNPC-221ENST00000555883 ANKRD49Q8WVL7 239 aa11.91□□□□□ -0.5
HNRNPC-221ENST00000555883 GAL3ST3Q96A11 431 aa11.91□□□□□ -0.5
HNRNPC-221ENST00000555883 RHBDF1Q96CC6 855 aa11.91□□□□□ -0.5
HNRNPC-221ENST00000555883 PTCHD1Q96NR3 888 aa11.91□□□□□ -0.5
HNRNPC-221ENST00000555883 SIGLEC12Q96PQ1 595 aa11.91□□□□□ -0.5
HNRNPC-221ENST00000555883 EGFL8Q99944 293 aa11.91□□□□□ -0.5
HNRNPC-221ENST00000555883 RBCK1Q9BYM8 510 aa11.91□□□□□ -0.5
HNRNPC-221ENST00000555883 PHACTR1Q9C0D0 580 aa11.91□□□□□ -0.5
HNRNPC-221ENST00000555883 GPAMQ9HCL2 828 aa11.91□□□□□ -0.5
HNRNPC-221ENST00000555883 CTNNAL1Q9UBT7 734 aa11.91□□□□□ -0.5
HNRNPC-221ENST00000555883 PPIEQ9UNP9 301 aaKnown RBP11.91□□□□□ -0.5
HNRNPC-221ENST00000555883 ZNF835Q9Y2P0 537 aa11.91□□□□□ -0.5
HNRNPC-221ENST00000555883 A0A088AWK7 358 aa11.9□□□□□ -0.5
HNRNPC-221ENST00000555883 FAM187AA6NFU0 413 aa11.9□□□□□ -0.5
HNRNPC-221ENST00000555883 SLC19A2O60779 497 aa11.9□□□□□ -0.5
HNRNPC-221ENST00000555883 SERPIND1P05546 499 aa11.9□□□□□ -0.5
HNRNPC-221ENST00000555883 SP1P08047 785 aa11.9□□□□□ -0.5
HNRNPC-221ENST00000555883 C1GALT1C1LP0DN25 315 aa11.9□□□□□ -0.5
HNRNPC-221ENST00000555883 AGAP20933 346 aa11.9□□□□□ -0.5
HNRNPC-221ENST00000555883 ZNF10P21506 573 aaPredicted RBP11.9□□□□□ -0.5
HNRNPC-221ENST00000555883 RPL21P46778 160 aaKnown RBP11.9□□□□□ -0.5
HNRNPC-221ENST00000555883 CASP6P55212 293 aa11.9□□□□□ -0.5
HNRNPC-221ENST00000555883 ZNF460Q14592 562 aa11.9□□□□□ -0.5
HNRNPC-221ENST00000555883 TSNQ15631 228 aaKnown RBP11.9□□□□□ -0.5
HNRNPC-221ENST00000555883 ADPRMQ3LIE5 342 aa11.9□□□□□ -0.5
HNRNPC-221ENST00000555883 TMIGD1Q6UXZ0 262 aa11.9□□□□□ -0.5
HNRNPC-221ENST00000555883 Q6ZPB1 254 aaPredicted RBP11.9□□□□□ -0.5
HNRNPC-221ENST00000555883 RPS19BP1Q86WX3 136 aaKnown RBP11.9□□□□□ -0.5
HNRNPC-221ENST00000555883 CEP97Q8IW35 865 aa11.9□□□□□ -0.5
HNRNPC-221ENST00000555883 ZBED8Q8IZ13 594 aa11.9□□□□□ -0.5
HNRNPC-221ENST00000555883 KRT78Q8N1N4 520 aa11.9□□□□□ -0.5
HNRNPC-221ENST00000555883 ZNF808Q8N4W9 903 aaPredicted RBP11.9□□□□□ -0.5
HNRNPC-221ENST00000555883 AMER2Q8N7J2 671 aa11.9□□□□□ -0.5
HNRNPC-221ENST00000555883 NFAM1Q8NET5 270 aaPredicted RBP11.9□□□□□ -0.5
HNRNPC-221ENST00000555883 ITLN2Q8WWU7 325 aaPredicted RBP11.9□□□□□ -0.5
HNRNPC-221ENST00000555883 CDKL2Q92772 493 aa11.9□□□□□ -0.5
HNRNPC-221ENST00000555883 TSPAN17Q96FV3 270 aa11.9□□□□□ -0.5
HNRNPC-221ENST00000555883 PDLIM2Q96JY6 352 aa11.9□□□□□ -0.5
HNRNPC-221ENST00000555883 GPR137Q96N19 417 aa11.9□□□□□ -0.5
HNRNPC-221ENST00000555883 FRMD6Q96NE9 622 aa11.9□□□□□ -0.5
HNRNPC-221ENST00000555883 CNOT10Q9H9A5 744 aaKnown RBP11.9□□□□□ -0.5
HNRNPC-221ENST00000555883 WHRNQ9P202 907 aa11.9□□□□□ -0.5
HNRNPC-221ENST00000555883 LRFN1Q9P244 771 aa11.9□□□□□ -0.5
HNRNPC-221ENST00000555883 TRGV8A0A0C4DH27 118 aa11.89□□□□□ -0.51
HNRNPC-221ENST00000555883 CTAGE15A4D2H0 777 aa11.89□□□□□ -0.51
HNRNPC-221ENST00000555883 LRIT2A6NDA9 550 aa11.89□□□□□ -0.51
HNRNPC-221ENST00000555883 NME2P1O60361 137 aa11.89□□□□□ -0.51
HNRNPC-221ENST00000555883 MAN1A2O60476 641 aa11.89□□□□□ -0.51
HNRNPC-221ENST00000555883 B4GALT2O60909 372 aa11.89□□□□□ -0.51
HNRNPC-221ENST00000555883 DNAJB6O75190 326 aa11.89□□□□□ -0.51
HNRNPC-221ENST00000555883 H2AFYO75367 372 aaKnown RBP11.89□□□□□ -0.51
HNRNPC-221ENST00000555883 CLEC3AO75596 197 aa11.89□□□□□ -0.51
HNRNPC-221ENST00000555883 WDR47O94967 919 aa11.89□□□□□ -0.51
HNRNPC-221ENST00000555883 GSTA2P09210 222 aa11.89□□□□□ -0.51
HNRNPC-221ENST00000555883 SAT1P21673 171 aa11.89□□□□□ -0.51
HNRNPC-221ENST00000555883 NME2P22392 152 aa11.89□□□□□ -0.51
HNRNPC-221ENST00000555883 SLC12A2P55011 1212 aa11.89□□□□□ -0.51
HNRNPC-221ENST00000555883 HSD17B7P56937 341 aa11.89□□□□□ -0.51
HNRNPC-221ENST00000555883 MLF1P58340 268 aa11.89□□□□□ -0.51
HNRNPC-221ENST00000555883 RAB8AP61006 207 aa11.89□□□□□ -0.51
HNRNPC-221ENST00000555883 ATP6V0D1P61421 351 aa11.89□□□□□ -0.51
HNRNPC-221ENST00000555883 OLR1P78380 273 aa11.89□□□□□ -0.51
HNRNPC-221ENST00000555883 CALCOCO2Q13137 446 aa11.89□□□□□ -0.51
HNRNPC-221ENST00000555883 RBBP5Q15291 538 aaKnown RBP11.89□□□□□ -0.51
HNRNPC-221ENST00000555883 SPINK14Q6IE38 97 aa11.89□□□□□ -0.51
HNRNPC-221ENST00000555883 SLC25A25Q6KCM7 469 aa11.89□□□□□ -0.51
HNRNPC-221ENST00000555883 BNC2Q6ZN30 1099 aaPredicted RBP11.89□□□□□ -0.51
HNRNPC-221ENST00000555883 MAATS1Q7Z4T9 603 aa11.89□□□□□ -0.51
HNRNPC-221ENST00000555883 CTAGE6Q86UF2 777 aa11.89□□□□□ -0.51
HNRNPC-221ENST00000555883 SIAH3Q8IW03 269 aa11.89□□□□□ -0.51
HNRNPC-221ENST00000555883 SCUBE1Q8IWY4 988 aa11.89□□□□□ -0.51
HNRNPC-221ENST00000555883 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.89□□□□□ -0.51
HNRNPC-221ENST00000555883 CA13Q8N1Q1 262 aa11.89□□□□□ -0.51
HNRNPC-221ENST00000555883 APCDD1LQ8NCL9 501 aa11.89□□□□□ -0.51
HNRNPC-221ENST00000555883 PYROXD1Q8WU10 500 aa11.89□□□□□ -0.51
HNRNPC-221ENST00000555883 MS4A6EQ96DS6 147 aa11.89□□□□□ -0.51
HNRNPC-221ENST00000555883 WDR34Q96EX3 536 aa11.89□□□□□ -0.51
HNRNPC-221ENST00000555883 CCDC120Q96HB5 630 aa11.89□□□□□ -0.51
HNRNPC-221ENST00000555883 FAR2Q96K12 515 aa11.89□□□□□ -0.51
HNRNPC-221ENST00000555883 UBXN10Q96LJ8 280 aa11.89□□□□□ -0.51
HNRNPC-221ENST00000555883 GPR22Q99680 433 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms