RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 GLYATL1Q969I3 302 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 VOPP1Q96AW1 172 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 PPCDCQ96CD2 204 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 C11orf24Q96F05 449 aaPredicted RBP6.73□□□□□ -1.33
TDP1-213ENST00000555880 VPS35Q96QK1 796 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 FEVQ99581 238 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 NEURL2Q9BR09 285 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 CORO1BQ9BR76 489 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 RHNO1Q9BSD3 238 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 EFCAB11Q9BUY7 163 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 ZCCHC2Q9C0B9 1178 aaKnown RBP6.73□□□□□ -1.33
TDP1-213ENST00000555880 SMG9Q9H0W8 520 aaKnown RBP6.73□□□□□ -1.33
TDP1-213ENST00000555880 DCSTAMPQ9H295 470 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 MMP27Q9H306 513 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 DSN1Q9H410 356 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 REEP4Q9H6H4 257 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 ARMC7Q9H6L4 198 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 PLCXD1Q9NUJ7 323 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 SIRT5Q9NXA8 310 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 NFKBIL1Q9UBC1 381 aaPredicted RBP6.73□□□□□ -1.33
TDP1-213ENST00000555880 SPASTQ9UBP0 616 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 RAPGEFL1Q9UHV5 662 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 ATP6V1HQ9UI12 483 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 PSORS1C1Q9UIG5 152 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 OSGIN1Q9UJX0 560 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.73□□□□□ -1.33
TDP1-213ENST00000555880 FAM32AQ9Y421 112 aaKnown RBP6.73□□□□□ -1.33
TDP1-213ENST00000555880 PCDHGA6Q9Y5G7 932 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 LYVE1Q9Y5Y7 322 aa6.73□□□□□ -1.33
TDP1-213ENST00000555880 PCM1Q15154 2024 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 TMEM202A6NGA9 273 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 CLCA1A8K7I4 914 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 TTC34A8MYJ7 566 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 H3BM21 787 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 PLK4O00444 970 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 YY2O15391 372 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 TGM5O43548 720 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 LEFTY1O75610 366 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 ETHE1O95571 254 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 C1QCP02747 245 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 C8AP07357 584 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 ELFN1P0C7U0 828 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 GJA1P17302 382 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 IMPA1P29218 277 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 CD40LGP29965 261 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 PBLDP30039 288 aaPredicted RBP6.72□□□□□ -1.33
TDP1-213ENST00000555880 SERPINB1P30740 379 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 S100A5P33763 92 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 UGT2B10P36537 528 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 TGFBR2P37173 567 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 IDH2P48735 452 aaKnown RBP6.72□□□□□ -1.33
TDP1-213ENST00000555880 PXNP49023 591 aaPredicted RBP6.72□□□□□ -1.33
TDP1-213ENST00000555880 PRLHRP49683 370 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 TMED10P49755 219 aaKnown RBP6.72□□□□□ -1.33
TDP1-213ENST00000555880 EIF2B2P49770 351 aaKnown RBP6.72□□□□□ -1.33
TDP1-213ENST00000555880 PPP5CP53041 499 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 CDH12P55289 794 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 RPS13P62277 151 aaKnown RBP6.72□□□□□ -1.33
TDP1-213ENST00000555880 TEKQ02763 1124 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 SCARB2Q14108 478 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 SF1Q15637 639 aaKnown RBP6.72□□□□□ -1.33
TDP1-213ENST00000555880 ZNF404Q494X3 552 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 MLIPQ5VWP3 458 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 LAIR1Q6GTX8 287 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 DPPA4Q7L190 304 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 TMEM25Q86YD3 366 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 CCDC71Q8IV32 467 aaPredicted RBP6.72□□□□□ -1.33
TDP1-213ENST00000555880 SLC30A8Q8IWU4 369 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 SYTL1Q8IYJ3 562 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 LGI4Q8N135 537 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 NAGSQ8N159 534 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 STX19Q8N4C7 294 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 DNAJC22Q8N4W6 341 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 SLC5A8Q8N695 610 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 RASGEF1AQ8N9B8 481 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 DENND6BQ8NEG7 585 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 GOT1L1Q8NHS2 421 aaPredicted RBP6.72□□□□□ -1.33
TDP1-213ENST00000555880 PSMA8Q8TAA3 256 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 BTN2A2Q8WVV5 523 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 APH1BQ8WW43 257 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 GEMIN6Q8WXD5 167 aaKnown RBP6.72□□□□□ -1.33
TDP1-213ENST00000555880 DNASE1L2Q92874 299 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 RPL3LQ92901 407 aaKnown RBP6.72□□□□□ -1.33
TDP1-213ENST00000555880 AP2M1Q96CW1 435 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 PKP4Q99569 1192 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 TCF25Q9BQ70 676 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 FAM83CQ9BQN1 747 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 SLC35A5Q9BS91 424 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 SLC46A2Q9BY10 475 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 NDUFAF4Q9P032 175 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 ZNF229Q9UJW7 825 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 PNMA8BQ9ULN7 279 aaPredicted RBP6.72□□□□□ -1.33
TDP1-213ENST00000555880 ANGPT4Q9Y264 503 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 BTBD3Q9Y2F9 522 aa6.72□□□□□ -1.33
TDP1-213ENST00000555880 SLC5A10A0PJK1 596 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 ISPDA4D126 451 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 A8MVJ9 347 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 FADS2P1A8MWK0 482 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 TAF4O00268 1085 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 FOXE1O00358 373 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms