RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 SEM1Q6ZVN7 128 aa8.47□□□□□ -1.05
PRKCH-218ENST00000555628 LDB1Q86U70 411 aaPredicted RBP8.47□□□□□ -1.05
PRKCH-218ENST00000555628 PLD3Q8IV08 490 aa8.47□□□□□ -1.05
PRKCH-218ENST00000555628 CCDC50Q8IVM0 306 aa8.47□□□□□ -1.05
PRKCH-218ENST00000555628 CDKL3Q8IVW4 592 aaPredicted RBP8.47□□□□□ -1.05
PRKCH-218ENST00000555628 RCOR2Q8IZ40 523 aa8.47□□□□□ -1.05
PRKCH-218ENST00000555628 AFAP1L2Q8N4X5 818 aa8.47□□□□□ -1.05
PRKCH-218ENST00000555628 RELL2Q8NC24 303 aaPredicted RBP8.47□□□□□ -1.05
PRKCH-218ENST00000555628 APCDD1LQ8NCL9 501 aa8.47□□□□□ -1.05
PRKCH-218ENST00000555628 UBASH3BQ8TF42 649 aa8.47□□□□□ -1.05
PRKCH-218ENST00000555628 SMPDL3AQ92484 453 aa8.47□□□□□ -1.05
PRKCH-218ENST00000555628 TM4SF19Q96DZ7 209 aa8.47□□□□□ -1.05
PRKCH-218ENST00000555628 LPAR4Q99677 370 aa8.47□□□□□ -1.05
PRKCH-218ENST00000555628 FAM118BQ9BPY3 351 aa8.47□□□□□ -1.05
PRKCH-218ENST00000555628 LRRC40Q9H9A6 602 aa8.47□□□□□ -1.05
PRKCH-218ENST00000555628 MRPS30Q9NP92 439 aaKnown RBP8.47□□□□□ -1.05
PRKCH-218ENST00000555628 TAC3Q9UHF0 121 aa8.47□□□□□ -1.05
PRKCH-218ENST00000555628 ZNF223Q9UK11 482 aaPredicted RBP8.47□□□□□ -1.05
PRKCH-218ENST00000555628 EFR3BQ9Y2G0 817 aa8.47□□□□□ -1.05
PRKCH-218ENST00000555628 LIPGQ9Y5X9 500 aa8.47□□□□□ -1.05
PRKCH-218ENST00000555628 OR14I1A6ND48 311 aa8.46□□□□□ -1.06
PRKCH-218ENST00000555628 E7ENX8 843 aa8.46□□□□□ -1.06
PRKCH-218ENST00000555628 SGK494L7N484 410 aa8.46□□□□□ -1.06
PRKCH-218ENST00000555628 SYT5O00445 386 aa8.46□□□□□ -1.06
PRKCH-218ENST00000555628 PRMT5O14744 637 aaPredicted RBP8.46□□□□□ -1.06
PRKCH-218ENST00000555628 NDUFB5O43674 189 aa8.46□□□□□ -1.06
PRKCH-218ENST00000555628 CDC40O60508 579 aaKnown RBP eCLIP8.46□□□□□ -1.06
PRKCH-218ENST00000555628 RDH16O75452 317 aa8.46□□□□□ -1.06
PRKCH-218ENST00000555628 PSIP1O75475 530 aaKnown RBP8.46□□□□□ -1.06
PRKCH-218ENST00000555628 PKMP14618 531 aaKnown RBP8.46□□□□□ -1.06
PRKCH-218ENST00000555628 RPS3P23396 243 aaKnown RBP eCLIP8.46□□□□□ -1.06
PRKCH-218ENST00000555628 KIR2DL3P43628 341 aa8.46□□□□□ -1.06
PRKCH-218ENST00000555628 AVPR1BP47901 424 aa8.46□□□□□ -1.06
PRKCH-218ENST00000555628 ZFP36L2P47974 494 aaKnown RBP8.46□□□□□ -1.06
PRKCH-218ENST00000555628 TAS2R50P59544 299 aa8.46□□□□□ -1.06
PRKCH-218ENST00000555628 EIF3EP60228 445 aaKnown RBP8.46□□□□□ -1.06
PRKCH-218ENST00000555628 GPR85P60893 370 aa8.46□□□□□ -1.06
PRKCH-218ENST00000555628 TAP2Q03519 686 aa8.46□□□□□ -1.06
PRKCH-218ENST00000555628 TMED2Q15363 201 aa8.46□□□□□ -1.06
PRKCH-218ENST00000555628 NSDHLQ15738 373 aa8.46□□□□□ -1.06
PRKCH-218ENST00000555628 PARP6Q2NL67 630 aa8.46□□□□□ -1.06
PRKCH-218ENST00000555628 TSTD2Q5T7W7 516 aa8.46□□□□□ -1.06
PRKCH-218ENST00000555628 POMZP3Q6PJE2 187 aa8.46□□□□□ -1.06
PRKCH-218ENST00000555628 B3GNT6Q6ZMB0 384 aa8.46□□□□□ -1.06
PRKCH-218ENST00000555628 KIAA0408Q6ZU52 694 aa8.46□□□□□ -1.06
PRKCH-218ENST00000555628 GALNT12Q8IXK2 581 aa8.46□□□□□ -1.06
PRKCH-218ENST00000555628 OR5M3Q8NGP4 307 aa8.46□□□□□ -1.06
PRKCH-218ENST00000555628 OR9A1PQ8NGU1 263 aa8.46□□□□□ -1.06
PRKCH-218ENST00000555628 OR4L1Q8NH43 312 aa8.46□□□□□ -1.06
PRKCH-218ENST00000555628 FAM222BQ8WU58 562 aa8.46□□□□□ -1.06
PRKCH-218ENST00000555628 ZNF480Q8WV37 535 aa8.46□□□□□ -1.06
PRKCH-218ENST00000555628 SLCO2A1Q92959 643 aa8.46□□□□□ -1.06
PRKCH-218ENST00000555628 RERGQ96A58 199 aaPredicted RBP8.46□□□□□ -1.06
PRKCH-218ENST00000555628 BIRC8Q96P09 236 aa8.46□□□□□ -1.06
PRKCH-218ENST00000555628 OR1F2PQ96R84 312 aa8.46□□□□□ -1.06
PRKCH-218ENST00000555628 MACROD1Q9BQ69 325 aa8.46□□□□□ -1.06
PRKCH-218ENST00000555628 RBCK1Q9BYM8 510 aa8.46□□□□□ -1.06
PRKCH-218ENST00000555628 SPTLC3Q9NUV7 552 aa8.46□□□□□ -1.06
PRKCH-218ENST00000555628 EML6Q6ZMW3 1958 aa8.46□□□□□ -1.06
PRKCH-218ENST00000555628 SAGE2PA6NJ88 616 aa8.45□□□□□ -1.06
PRKCH-218ENST00000555628 USP27XA6NNY8 438 aa8.45□□□□□ -1.06
PRKCH-218ENST00000555628 FAM171A2A8MVW0 826 aa8.45□□□□□ -1.06
PRKCH-218ENST00000555628 NPIPA2E9PIF3 369 aa8.45□□□□□ -1.06
PRKCH-218ENST00000555628 F8W8V4 182 aa8.45□□□□□ -1.06
PRKCH-218ENST00000555628 NPIPA3F8WFD2 350 aa8.45□□□□□ -1.06
PRKCH-218ENST00000555628 KIF5CO60282 957 aa8.45□□□□□ -1.06
PRKCH-218ENST00000555628 DNAJB6O75190 326 aa8.45□□□□□ -1.06
PRKCH-218ENST00000555628 PDE9AO76083 593 aa8.45□□□□□ -1.06
PRKCH-218ENST00000555628 SLC16A8O95907 504 aa8.45□□□□□ -1.06
PRKCH-218ENST00000555628 ENDOUP21128 410 aaKnown RBP8.45□□□□□ -1.06
PRKCH-218ENST00000555628 ARNTP27540 789 aa8.45□□□□□ -1.06
PRKCH-218ENST00000555628 DCAF7P61962 342 aa8.45□□□□□ -1.06
PRKCH-218ENST00000555628 NDUFA9Q16795 377 aa8.45□□□□□ -1.06
PRKCH-218ENST00000555628 SPRED3Q2MJR0 410 aa8.45□□□□□ -1.06
PRKCH-218ENST00000555628 ODF2Q5BJF6 829 aa8.45□□□□□ -1.06
PRKCH-218ENST00000555628 MFSD4BQ5TF39 518 aa8.45□□□□□ -1.06
PRKCH-218ENST00000555628 TTC23LQ6PF05 361 aa8.45□□□□□ -1.06
PRKCH-218ENST00000555628 RAB42Q8N4Z0 105 aa8.45□□□□□ -1.06
PRKCH-218ENST00000555628 ACRBPQ8NEB7 543 aa8.45□□□□□ -1.06
PRKCH-218ENST00000555628 OR5T3Q8NGG3 340 aa8.45□□□□□ -1.06
PRKCH-218ENST00000555628 OR52K1Q8NGK4 314 aa8.45□□□□□ -1.06
PRKCH-218ENST00000555628 OR5M9Q8NGP3 310 aa8.45□□□□□ -1.06
PRKCH-218ENST00000555628 PEX13Q92968 403 aa8.45□□□□□ -1.06
PRKCH-218ENST00000555628 TMEM125Q96AQ2 219 aa8.45□□□□□ -1.06
PRKCH-218ENST00000555628 PKP4Q99569 1192 aa8.45□□□□□ -1.06
PRKCH-218ENST00000555628 CHP1Q99653 195 aa8.45□□□□□ -1.06
PRKCH-218ENST00000555628 SARGQ9BW04 601 aa8.45□□□□□ -1.06
PRKCH-218ENST00000555628 TSSK1BQ9BXA7 367 aa8.45□□□□□ -1.06
PRKCH-218ENST00000555628 BHLHE41Q9C0J9 482 aaPredicted RBP8.45□□□□□ -1.06
PRKCH-218ENST00000555628 INTUQ9ULD6 942 aa8.45□□□□□ -1.06
PRKCH-218ENST00000555628 PPIEQ9UNP9 301 aaKnown RBP8.45□□□□□ -1.06
PRKCH-218ENST00000555628 SH2B3Q9UQQ2 575 aa8.45□□□□□ -1.06
PRKCH-218ENST00000555628 CLDN16Q9Y5I7 305 aa8.45□□□□□ -1.06
PRKCH-218ENST00000555628 MRFAP1Q9Y605 127 aa8.45□□□□□ -1.06
PRKCH-218ENST00000555628 NCKAP5O14513 1909 aa8.44□□□□□ -1.06
PRKCH-218ENST00000555628 KIAA1549Q9HCM3 1950 aa8.44□□□□□ -1.06
PRKCH-218ENST00000555628 TCRBV16S1A1N1A0A5B0 115 aa8.44□□□□□ -1.06
PRKCH-218ENST00000555628 SMTNL1A8MU46 457 aa8.44□□□□□ -1.06
PRKCH-218ENST00000555628 INAFM1C9JVW0 142 aa8.44□□□□□ -1.06
PRKCH-218ENST00000555628 KLRC4-KLRK1H3BQV0 150 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms