RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 ZNF556Q9HAH1 456 aa16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 DNAJC11Q9NVH1 559 aa16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 TMEM161AQ9NX61 479 aa16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 PCDHGB1Q9Y5G3 927 aa16.4■□□□□ 0.22
PPP4R3A-208ENST00000555462 AP2A2O94973 939 aa16.39■□□□□ 0.21
PPP4R3A-208ENST00000555462 GASTP01350 101 aa16.39■□□□□ 0.21
PPP4R3A-208ENST00000555462 IL18R1Q13478 541 aa16.39■□□□□ 0.21
PPP4R3A-208ENST00000555462 DUSP7Q16829 419 aa16.39■□□□□ 0.21
PPP4R3A-208ENST00000555462 ZFP69Q49AA0 526 aa16.39■□□□□ 0.21
PPP4R3A-208ENST00000555462 BRAT1Q6PJG6 821 aa16.39■□□□□ 0.21
PPP4R3A-208ENST00000555462 B3GLCTQ6Y288 498 aa16.39■□□□□ 0.21
PPP4R3A-208ENST00000555462 HRASLS5Q96KN8 279 aa16.39■□□□□ 0.21
PPP4R3A-208ENST00000555462 WFDC6Q9BQY6 131 aa16.39■□□□□ 0.21
PPP4R3A-208ENST00000555462 ASPNQ9BXN1 380 aa16.39■□□□□ 0.21
PPP4R3A-208ENST00000555462 TRPV5Q9NQA5 729 aa16.39■□□□□ 0.21
PPP4R3A-208ENST00000555462 PCDHGB3Q9Y5G1 929 aa16.39■□□□□ 0.21
PPP4R3A-208ENST00000555462 HAT1O14929 419 aa16.39■□□□□ 0.21
PPP4R3A-208ENST00000555462 SCN2BO60939 215 aa16.39■□□□□ 0.21
PPP4R3A-208ENST00000555462 ENTPD6O75354 484 aa16.39■□□□□ 0.21
PPP4R3A-208ENST00000555462 SLC16A8O95907 504 aa16.39■□□□□ 0.21
PPP4R3A-208ENST00000555462 ALPPL2P10696 532 aa16.39■□□□□ 0.21
PPP4R3A-208ENST00000555462 GPR162Q16538 588 aa16.39■□□□□ 0.21
PPP4R3A-208ENST00000555462 DEF8Q6ZN54 512 aa16.39■□□□□ 0.21
PPP4R3A-208ENST00000555462 Q6ZVU0 165 aa16.39■□□□□ 0.21
PPP4R3A-208ENST00000555462 IL17RDQ8NFM7 739 aa16.39■□□□□ 0.21
PPP4R3A-208ENST00000555462 ZNF566Q969W8 418 aa16.39■□□□□ 0.21
PPP4R3A-208ENST00000555462 OTULINQ96BN8 352 aa16.39■□□□□ 0.21
PPP4R3A-208ENST00000555462 SDHCQ99643 169 aaPredicted RBP16.39■□□□□ 0.21
PPP4R3A-208ENST00000555462 SLC35A5Q9BS91 424 aa16.39■□□□□ 0.21
PPP4R3A-208ENST00000555462 GPATCH2Q9NW75 528 aa16.39■□□□□ 0.21
PPP4R3A-208ENST00000555462 PLAGL1Q9UM63 463 aa16.39■□□□□ 0.21
PPP4R3A-208ENST00000555462 SH2B3Q9UQQ2 575 aa16.39■□□□□ 0.21
PPP4R3A-208ENST00000555462 UGT2B15P54855 530 aa16.38■□□□□ 0.21
PPP4R3A-208ENST00000555462 CCDC80Q76M96 950 aa16.38■□□□□ 0.21
PPP4R3A-208ENST00000555462 PLPP6Q8IY26 295 aa16.38■□□□□ 0.21
PPP4R3A-208ENST00000555462 CCNB1IP1Q9NPC3 277 aa16.38■□□□□ 0.21
PPP4R3A-208ENST00000555462 KCTD5Q9NXV2 234 aa16.38■□□□□ 0.21
PPP4R3A-208ENST00000555462 SPTBP11277 2137 aa16.38■□□□□ 0.21
PPP4R3A-208ENST00000555462 PLXNA4Q9HCM2 1894 aa16.38■□□□□ 0.21
PPP4R3A-208ENST00000555462 MEN1O00255 615 aa16.38■□□□□ 0.21
PPP4R3A-208ENST00000555462 PLD2O14939 933 aa16.38■□□□□ 0.21
PPP4R3A-208ENST00000555462 TPD52L2O43399 206 aaKnown RBP16.38■□□□□ 0.21
PPP4R3A-208ENST00000555462 ATXN8OSP0DMR3 200 aa16.38■□□□□ 0.21
PPP4R3A-208ENST00000555462 PRPS2P11908 318 aa16.38■□□□□ 0.21
PPP4R3A-208ENST00000555462 SRCP12931 536 aa16.38■□□□□ 0.21
PPP4R3A-208ENST00000555462 PRPS1L1P21108 318 aa16.38■□□□□ 0.21
PPP4R3A-208ENST00000555462 GGT2P36268 569 aa16.38■□□□□ 0.21
PPP4R3A-208ENST00000555462 PTSQ03393 145 aa16.38■□□□□ 0.21
PPP4R3A-208ENST00000555462 TRAF7Q6Q0C0 670 aa16.38■□□□□ 0.21
PPP4R3A-208ENST00000555462 SIX5Q8N196 739 aa16.38■□□□□ 0.21
PPP4R3A-208ENST00000555462 CADM2Q8N3J6 435 aa16.38■□□□□ 0.21
PPP4R3A-208ENST00000555462 PCNPQ8WW12 178 aaKnown RBP16.38■□□□□ 0.21
PPP4R3A-208ENST00000555462 COQ8BQ96D53 544 aa16.38■□□□□ 0.21
PPP4R3A-208ENST00000555462 ABCG4Q9H172 646 aa16.38■□□□□ 0.21
PPP4R3A-208ENST00000555462 ZDHHC4Q9NPG8 344 aa16.38■□□□□ 0.21
PPP4R3A-208ENST00000555462 TAS2R9Q9NYW1 312 aa16.38■□□□□ 0.21
PPP4R3A-208ENST00000555462 NRG2O14511 850 aaPredicted RBP16.38■□□□□ 0.21
PPP4R3A-208ENST00000555462 CPNE3O75131 537 aaKnown RBP16.38■□□□□ 0.21
PPP4R3A-208ENST00000555462 ETV3P41162 512 aa16.38■□□□□ 0.21
PPP4R3A-208ENST00000555462 ITGA1P56199 1179 aa16.38■□□□□ 0.21
PPP4R3A-208ENST00000555462 BCL2A1Q16548 175 aa16.38■□□□□ 0.21
PPP4R3A-208ENST00000555462 ZC3H12BQ5HYM0 836 aaKnown RBP16.38■□□□□ 0.21
PPP4R3A-208ENST00000555462 HUS1BQ8NHY5 278 aa16.38■□□□□ 0.21
PPP4R3A-208ENST00000555462 WDR48Q8TAF3 677 aa16.38■□□□□ 0.21
PPP4R3A-208ENST00000555462 FBLIM1Q8WUP2 373 aa16.38■□□□□ 0.21
PPP4R3A-208ENST00000555462 CMTM7Q96FZ5 175 aa16.38■□□□□ 0.21
PPP4R3A-208ENST00000555462 DOHHQ9BU89 302 aa16.38■□□□□ 0.21
PPP4R3A-208ENST00000555462 BARHL1Q9BZE3 327 aa16.38■□□□□ 0.21
PPP4R3A-208ENST00000555462 RRAGCQ9HB90 399 aa16.38■□□□□ 0.21
PPP4R3A-208ENST00000555462 IL20RAQ9UHF4 553 aa16.38■□□□□ 0.21
PPP4R3A-208ENST00000555462 TMPRSS11EQ9UL52 423 aa16.38■□□□□ 0.21
PPP4R3A-208ENST00000555462 RIMKLBQ9ULI2 386 aa16.38■□□□□ 0.21
PPP4R3A-208ENST00000555462 CLCA3PQ9Y6N3 262 aa16.38■□□□□ 0.21
PPP4R3A-208ENST00000555462 A0A1W2PQ09 198 aa16.37■□□□□ 0.21
PPP4R3A-208ENST00000555462 CLDN24A6NM45 220 aa16.37■□□□□ 0.21
PPP4R3A-208ENST00000555462 H3BQ06 376 aaPredicted RBP16.37■□□□□ 0.21
PPP4R3A-208ENST00000555462 FZD6O60353 706 aa16.37■□□□□ 0.21
PPP4R3A-208ENST00000555462 PFN3P60673 137 aa16.37■□□□□ 0.21
PPP4R3A-208ENST00000555462 INSL4Q14641 139 aa16.37■□□□□ 0.21
PPP4R3A-208ENST00000555462 SLC5A12Q1EHB4 618 aa16.37■□□□□ 0.21
PPP4R3A-208ENST00000555462 CST9Q5W186 159 aa16.37■□□□□ 0.21
PPP4R3A-208ENST00000555462 FAM131AQ6UXB0 335 aa16.37■□□□□ 0.21
PPP4R3A-208ENST00000555462 THOC6Q86W42 341 aaKnown RBP16.37■□□□□ 0.21
PPP4R3A-208ENST00000555462 GALNT12Q8IXK2 581 aa16.37■□□□□ 0.21
PPP4R3A-208ENST00000555462 NLGN4YQ8NFZ3 816 aaPredicted RBP16.37■□□□□ 0.21
PPP4R3A-208ENST00000555462 FATE1Q969F0 183 aa16.37■□□□□ 0.21
PPP4R3A-208ENST00000555462 PHOX2BQ99453 314 aa16.37■□□□□ 0.21
PPP4R3A-208ENST00000555462 CPNE5Q9HCH3 593 aa16.37■□□□□ 0.21
PPP4R3A-208ENST00000555462 TBC1D24Q9ULP9 559 aa16.37■□□□□ 0.21
PPP4R3A-208ENST00000555462 PCDHB11Q9Y5F2 797 aa16.37■□□□□ 0.21
PPP4R3A-208ENST00000555462 TRBV4-1A0A0J9YWV2 114 aa16.37■□□□□ 0.21
PPP4R3A-208ENST00000555462 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.37■□□□□ 0.21
PPP4R3A-208ENST00000555462 TMEM229AB2RXF0 380 aa16.37■□□□□ 0.21
PPP4R3A-208ENST00000555462 NSG1P42857 185 aa16.37■□□□□ 0.21
PPP4R3A-208ENST00000555462 DEFA1P59665 94 aa16.37■□□□□ 0.21
PPP4R3A-208ENST00000555462 DEFA3P59666 94 aa16.37■□□□□ 0.21
PPP4R3A-208ENST00000555462 SSX1Q16384 188 aa16.37■□□□□ 0.21
PPP4R3A-208ENST00000555462 SERPINA11Q86U17 422 aa16.37■□□□□ 0.21
PPP4R3A-208ENST00000555462 MMAAQ8IVH4 418 aaKnown RBP16.37■□□□□ 0.21
PPP4R3A-208ENST00000555462 HJURPQ8NCD3 748 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms