RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 BARHL1Q9BZE3 327 aa4.7□□□□□ -1.66
CKS1BP1-201ENST00000555221 TRIM7Q9C029 511 aa4.7□□□□□ -1.66
CKS1BP1-201ENST00000555221 HOXD1Q9GZZ0 328 aa4.7□□□□□ -1.66
CKS1BP1-201ENST00000555221 TSPYL1Q9H0U9 437 aa4.7□□□□□ -1.66
CKS1BP1-201ENST00000555221 VIPAS39Q9H9C1 493 aa4.7□□□□□ -1.66
CKS1BP1-201ENST00000555221 FGF22Q9HCT0 170 aa4.7□□□□□ -1.66
CKS1BP1-201ENST00000555221 DNAJC11Q9NVH1 559 aa4.7□□□□□ -1.66
CKS1BP1-201ENST00000555221 DBF4Q9UBU7 674 aaPredicted RBP4.7□□□□□ -1.66
CKS1BP1-201ENST00000555221 POMT2Q9UKY4 750 aa4.7□□□□□ -1.66
CKS1BP1-201ENST00000555221 MRPS28Q9Y2Q9 187 aaKnown RBP4.7□□□□□ -1.66
CKS1BP1-201ENST00000555221 PYGO1Q9Y3Y4 419 aa4.7□□□□□ -1.66
CKS1BP1-201ENST00000555221 A0A087WYN8 130 aa4.69□□□□□ -1.66
CKS1BP1-201ENST00000555221 TMEM129A0AVI4 362 aa4.69□□□□□ -1.66
CKS1BP1-201ENST00000555221 CCDC162PA2VCL2 907 aa4.69□□□□□ -1.66
CKS1BP1-201ENST00000555221 MAGEC1O60732 1142 aa4.69□□□□□ -1.66
CKS1BP1-201ENST00000555221 NXPH2O95156 264 aa4.69□□□□□ -1.66
CKS1BP1-201ENST00000555221 HMOX1P09601 288 aa4.69□□□□□ -1.66
CKS1BP1-201ENST00000555221 CFC1BP0CG36 223 aa4.69□□□□□ -1.66
CKS1BP1-201ENST00000555221 CFC1P0CG37 223 aa4.69□□□□□ -1.66
CKS1BP1-201ENST00000555221 P4HA1P13674 534 aa4.69□□□□□ -1.66
CKS1BP1-201ENST00000555221 CBX3Q13185 183 aa4.69□□□□□ -1.66
CKS1BP1-201ENST00000555221 PLBD1Q6P4A8 553 aa4.69□□□□□ -1.66
CKS1BP1-201ENST00000555221 ALKBH5Q6P6C2 394 aaKnown RBP4.69□□□□□ -1.66
CKS1BP1-201ENST00000555221 BHLHB9Q6PI77 547 aa4.69□□□□□ -1.66
CKS1BP1-201ENST00000555221 ZC3H3Q8IXZ2 948 aaKnown RBP4.69□□□□□ -1.66
CKS1BP1-201ENST00000555221 THEM5Q8N1Q8 247 aa4.69□□□□□ -1.66
CKS1BP1-201ENST00000555221 HCAR2Q8TDS4 363 aa4.69□□□□□ -1.66
CKS1BP1-201ENST00000555221 CCDC47Q96A33 483 aaKnown RBP4.69□□□□□ -1.66
CKS1BP1-201ENST00000555221 EPSTI1Q96J88 318 aa4.69□□□□□ -1.66
CKS1BP1-201ENST00000555221 GAL3ST4Q96RP7 486 aa4.69□□□□□ -1.66
CKS1BP1-201ENST00000555221 PCDHB18PQ96TA0 734 aa4.69□□□□□ -1.66
CKS1BP1-201ENST00000555221 UBAC1Q9BSL1 405 aa4.69□□□□□ -1.66
CKS1BP1-201ENST00000555221 MTIF3Q9H2K0 278 aaKnown RBP4.69□□□□□ -1.66
CKS1BP1-201ENST00000555221 ZDHHC6Q9H6R6 413 aa4.69□□□□□ -1.66
CKS1BP1-201ENST00000555221 MTHFD2LQ9H903 347 aaPredicted RBP4.69□□□□□ -1.66
CKS1BP1-201ENST00000555221 PLCXD1Q9NUJ7 323 aa4.69□□□□□ -1.66
CKS1BP1-201ENST00000555221 hCG_38984A0A1B0GV85 526 aa4.68□□□□□ -1.66
CKS1BP1-201ENST00000555221 ZNF732B4DXR9 585 aa4.68□□□□□ -1.66
CKS1BP1-201ENST00000555221 TCP10L2B9ZVM9 353 aa4.68□□□□□ -1.66
CKS1BP1-201ENST00000555221 PRDM1O75626 825 aa4.68□□□□□ -1.66
CKS1BP1-201ENST00000555221 CEACAM4O75871 244 aa4.68□□□□□ -1.66
CKS1BP1-201ENST00000555221 IGHEP01854 428 aa4.68□□□□□ -1.66
CKS1BP1-201ENST00000555221 ZNF26P17031 533 aaPredicted RBP4.68□□□□□ -1.66
CKS1BP1-201ENST00000555221 NT5C2P49902 561 aa4.68□□□□□ -1.66
CKS1BP1-201ENST00000555221 UCP2P55851 309 aa4.68□□□□□ -1.66
CKS1BP1-201ENST00000555221 CNTN1Q12860 1018 aa4.68□□□□□ -1.66
CKS1BP1-201ENST00000555221 CEACAM7Q14002 265 aa4.68□□□□□ -1.66
CKS1BP1-201ENST00000555221 LRRC37A5PQ49AS3 106 aa4.68□□□□□ -1.66
CKS1BP1-201ENST00000555221 ZNF776Q68DI1 518 aaPredicted RBP4.68□□□□□ -1.66
CKS1BP1-201ENST00000555221 ETFRF1Q6IPR1 90 aa4.68□□□□□ -1.66
CKS1BP1-201ENST00000555221 CD164L2Q6UWJ8 174 aa4.68□□□□□ -1.66
CKS1BP1-201ENST00000555221 C17orf107Q6ZR85 190 aa4.68□□□□□ -1.66
CKS1BP1-201ENST00000555221 RFPL4BQ6ZWI9 263 aa4.68□□□□□ -1.66
CKS1BP1-201ENST00000555221 NOTCH2NLQ7Z3S9 236 aa4.68□□□□□ -1.66
CKS1BP1-201ENST00000555221 ZER1Q7Z7L7 766 aa4.68□□□□□ -1.66
CKS1BP1-201ENST00000555221 CNTN4Q8IWV2 1026 aa4.68□□□□□ -1.66
CKS1BP1-201ENST00000555221 RTL3Q8N8U3 475 aaKnown RBP4.68□□□□□ -1.66
CKS1BP1-201ENST00000555221 GPATCH11Q8N954 259 aa4.68□□□□□ -1.66
CKS1BP1-201ENST00000555221 BPIFA2Q96DR5 249 aa4.68□□□□□ -1.66
CKS1BP1-201ENST00000555221 DDX50Q9BQ39 737 aaKnown RBP4.68□□□□□ -1.66
CKS1BP1-201ENST00000555221 KRTAP1-5Q9BYS1 174 aa4.68□□□□□ -1.66
CKS1BP1-201ENST00000555221 LNPEPQ9UIQ6 1025 aa4.68□□□□□ -1.66
CKS1BP1-201ENST00000555221 KCNK6Q9Y257 313 aa4.68□□□□□ -1.66
CKS1BP1-201ENST00000555221 FOXA2Q9Y261 457 aaPredicted RBP4.68□□□□□ -1.66
CKS1BP1-201ENST00000555221 EXOC6BQ9Y2D4 811 aa4.68□□□□□ -1.66
CKS1BP1-201ENST00000555221 ANGPTL3Q9Y5C1 460 aa4.68□□□□□ -1.66
CKS1BP1-201ENST00000555221 IQCMA0A1B0GVH7 501 aa4.67□□□□□ -1.66
CKS1BP1-201ENST00000555221 GTPBP10A4D1E9 387 aaKnown RBP4.67□□□□□ -1.66
CKS1BP1-201ENST00000555221 C5orf51A6NDU8 294 aa4.67□□□□□ -1.66
CKS1BP1-201ENST00000555221 NR5A2O00482 541 aa4.67□□□□□ -1.66
CKS1BP1-201ENST00000555221 ZBTB14O43829 449 aa4.67□□□□□ -1.66
CKS1BP1-201ENST00000555221 MT-ND3P03897 115 aa4.67□□□□□ -1.66
CKS1BP1-201ENST00000555221 GSTA2P09210 222 aa4.67□□□□□ -1.66
CKS1BP1-201ENST00000555221 MYOGP15173 224 aa4.67□□□□□ -1.66
CKS1BP1-201ENST00000555221 FERP16591 822 aa4.67□□□□□ -1.66
CKS1BP1-201ENST00000555221 GIFP27352 417 aa4.67□□□□□ -1.66
CKS1BP1-201ENST00000555221 IRX4P78413 519 aa4.67□□□□□ -1.66
CKS1BP1-201ENST00000555221 CYCSP99999 105 aaKnown RBP4.67□□□□□ -1.66
CKS1BP1-201ENST00000555221 GPR50Q13585 617 aa4.67□□□□□ -1.66
CKS1BP1-201ENST00000555221 ZFP69Q49AA0 526 aa4.67□□□□□ -1.66
CKS1BP1-201ENST00000555221 TOM1L2Q6ZVM7 507 aa4.67□□□□□ -1.66
CKS1BP1-201ENST00000555221 CYP4V2Q6ZWL3 525 aaPredicted RBP4.67□□□□□ -1.66
CKS1BP1-201ENST00000555221 PEX5LQ8IYB4 626 aa4.67□□□□□ -1.66
CKS1BP1-201ENST00000555221 SLC22A15Q8IZD6 547 aa4.67□□□□□ -1.66
CKS1BP1-201ENST00000555221 ELMOD1Q8N336 334 aa4.67□□□□□ -1.66
CKS1BP1-201ENST00000555221 SFRP1Q8N474 314 aa4.67□□□□□ -1.66
CKS1BP1-201ENST00000555221 ARL10Q8N8L6 244 aa4.67□□□□□ -1.66
CKS1BP1-201ENST00000555221 CLEC1AQ8NC01 280 aa4.67□□□□□ -1.66
CKS1BP1-201ENST00000555221 ADAD2Q8NCV1 583 aaKnown RBP4.67□□□□□ -1.66
CKS1BP1-201ENST00000555221 ZNF248Q8NDW4 579 aa4.67□□□□□ -1.66
CKS1BP1-201ENST00000555221 OR13C5Q8NGS8 318 aa4.67□□□□□ -1.66
CKS1BP1-201ENST00000555221 RNASE8Q8TDE3 154 aaKnown RBP4.67□□□□□ -1.66
CKS1BP1-201ENST00000555221 GANCQ8TET4 914 aa4.67□□□□□ -1.66
CKS1BP1-201ENST00000555221 GUCD1Q96NT3 240 aa4.67□□□□□ -1.66
CKS1BP1-201ENST00000555221 USP28Q96RU2 1077 aa4.67□□□□□ -1.66
CKS1BP1-201ENST00000555221 SYT15Q9BQS2 421 aa4.67□□□□□ -1.66
CKS1BP1-201ENST00000555221 FAM213AQ9BRX8 229 aa4.67□□□□□ -1.66
CKS1BP1-201ENST00000555221 CCM2Q9BSQ5 444 aa4.67□□□□□ -1.66
CKS1BP1-201ENST00000555221 DGCR6LQ9BY27 220 aa4.67□□□□□ -1.66
CKS1BP1-201ENST00000555221 MED20Q9H944 212 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms