RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 HPCAL1P37235 193 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 PHEXP78562 749 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 CPZQ66K79 652 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 MRM1Q6IN84 353 aaKnown RBP8.5□□□□□ -1.05
TDP1-210ENST00000554976 SPRED1Q7Z699 444 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 SFTPA2Q8IWL1 248 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 FAM20CQ8IXL6 584 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 MICU2Q8IYU8 434 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 TMEM132CQ8N3T6 1108 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 MFSD9Q8NBP5 474 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 FAM174AQ8TBP5 190 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 LZICQ8WZA0 190 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 GATA6Q92908 595 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 TEFMQ96QE5 360 aaKnown RBP8.5□□□□□ -1.05
TDP1-210ENST00000554976 F2RL3Q96RI0 385 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 FOXQ1Q9C009 403 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 NTN4Q9HB63 628 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 PILRAQ9UKJ1 303 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 LRCH1Q9Y2L9 728 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 COLEC10Q9Y6Z7 277 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 CACNA1IQ9P0X4 2223 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 OR2A25A4D2G3 310 aa8.49□□□□□ -1.05
TDP1-210ENST00000554976 K7ESF4 209 aa8.49□□□□□ -1.05
TDP1-210ENST00000554976 NDUFS4O43181 175 aa8.49□□□□□ -1.05
TDP1-210ENST00000554976 HNRNPRO43390 633 aaKnown RBP8.49□□□□□ -1.05
TDP1-210ENST00000554976 DENRO43583 198 aaKnown RBP8.49□□□□□ -1.05
TDP1-210ENST00000554976 TMPRSS11DO60235 418 aa8.49□□□□□ -1.05
TDP1-210ENST00000554976 ZNF217O75362 1048 aa8.49□□□□□ -1.05
TDP1-210ENST00000554976 TIPRLO75663 272 aa8.49□□□□□ -1.05
TDP1-210ENST00000554976 GBAP04062 536 aa8.49□□□□□ -1.05
TDP1-210ENST00000554976 KLK1P06870 262 aa8.49□□□□□ -1.05
TDP1-210ENST00000554976 RETP07949 1114 aa8.49□□□□□ -1.05
TDP1-210ENST00000554976 IL3P08700 152 aa8.49□□□□□ -1.05
TDP1-210ENST00000554976 AHRP35869 848 aa8.49□□□□□ -1.05
TDP1-210ENST00000554976 PCBP4P57723 403 aaKnown RBP8.49□□□□□ -1.05
TDP1-210ENST00000554976 PLIN5Q00G26 463 aa8.49□□□□□ -1.05
TDP1-210ENST00000554976 ABHD18Q0P651 414 aa8.49□□□□□ -1.05
TDP1-210ENST00000554976 LRRC74AQ0VAA2 488 aa8.49□□□□□ -1.05
TDP1-210ENST00000554976 TRIP10Q15642 601 aa8.49□□□□□ -1.05
TDP1-210ENST00000554976 ATP6AP1Q15904 470 aa8.49□□□□□ -1.05
TDP1-210ENST00000554976 FCRL6Q6DN72 434 aa8.49□□□□□ -1.05
TDP1-210ENST00000554976 AMIGO1Q86WK6 493 aa8.49□□□□□ -1.05
TDP1-210ENST00000554976 GJD3Q8N144 294 aa8.49□□□□□ -1.05
TDP1-210ENST00000554976 NAGSQ8N159 534 aa8.49□□□□□ -1.05
TDP1-210ENST00000554976 TRPV3Q8NET8 790 aa8.49□□□□□ -1.05
TDP1-210ENST00000554976 OR2T12Q8NG77 320 aa8.49□□□□□ -1.05
TDP1-210ENST00000554976 NT5CQ8TCD5 201 aa8.49□□□□□ -1.05
TDP1-210ENST00000554976 JPH3Q8WXH2 748 aaPredicted RBP8.49□□□□□ -1.05
TDP1-210ENST00000554976 ZNF597Q96LX8 424 aa8.49□□□□□ -1.05
TDP1-210ENST00000554976 BTBD9Q96Q07 612 aa8.49□□□□□ -1.05
TDP1-210ENST00000554976 SH3GL1Q99961 368 aa8.49□□□□□ -1.05
TDP1-210ENST00000554976 GPR174Q9BXC1 333 aa8.49□□□□□ -1.05
TDP1-210ENST00000554976 SLC6A16Q9GZN6 736 aa8.49□□□□□ -1.05
TDP1-210ENST00000554976 PCED1AQ9H1Q7 454 aa8.49□□□□□ -1.05
TDP1-210ENST00000554976 KLHL31Q9H511 634 aa8.49□□□□□ -1.05
TDP1-210ENST00000554976 EVA1BQ9NVM1 165 aa8.49□□□□□ -1.05
TDP1-210ENST00000554976 RFXANKO14593 260 aa8.49□□□□□ -1.05
TDP1-210ENST00000554976 GPR37L1O60883 481 aa8.49□□□□□ -1.05
TDP1-210ENST00000554976 GCM2O75603 506 aaPredicted RBP8.49□□□□□ -1.05
TDP1-210ENST00000554976 SCELO95171 688 aa8.49□□□□□ -1.05
TDP1-210ENST00000554976 GSNP06396 782 aa8.49□□□□□ -1.05
TDP1-210ENST00000554976 TAS2R50P59544 299 aa8.49□□□□□ -1.05
TDP1-210ENST00000554976 EEF1A2Q05639 463 aaKnown RBP8.49□□□□□ -1.05
TDP1-210ENST00000554976 TSTA3Q13630 321 aaPredicted RBP8.49□□□□□ -1.05
TDP1-210ENST00000554976 CPTPQ5TA50 214 aa8.49□□□□□ -1.05
TDP1-210ENST00000554976 VN1R4Q7Z5H5 301 aa8.49□□□□□ -1.05
TDP1-210ENST00000554976 RAB42Q8N4Z0 105 aa8.49□□□□□ -1.05
TDP1-210ENST00000554976 TSTD1Q8NFU3 115 aa8.49□□□□□ -1.05
TDP1-210ENST00000554976 PSMA8Q8TAA3 256 aa8.49□□□□□ -1.05
TDP1-210ENST00000554976 CIDECQ96AQ7 238 aaPredicted RBP8.49□□□□□ -1.05
TDP1-210ENST00000554976 MS4A6EQ96DS6 147 aa8.49□□□□□ -1.05
TDP1-210ENST00000554976 SLC6A18Q96N87 628 aa8.49□□□□□ -1.05
TDP1-210ENST00000554976 TRAPPC9Q96Q05 1148 aa8.49□□□□□ -1.05
TDP1-210ENST00000554976 MRPS30Q9NP92 439 aaKnown RBP8.49□□□□□ -1.05
TDP1-210ENST00000554976 SLAMF7Q9NQ25 335 aa8.49□□□□□ -1.05
TDP1-210ENST00000554976 PRDM7Q9NQW5 492 aa8.49□□□□□ -1.05
TDP1-210ENST00000554976 DCAF13Q9NV06 445 aaKnown RBP8.49□□□□□ -1.05
TDP1-210ENST00000554976 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.49□□□□□ -1.05
TDP1-210ENST00000554976 WBP11Q9Y2W2 641 aaKnown RBP8.49□□□□□ -1.05
TDP1-210ENST00000554976 ELOVL7A1L3X0 281 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 C7orf72A4D263 438 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 PDZK1P1A8MUH7 402 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 METTL12A8MUP2 240 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 RASGRP1O95267 797 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 TNFP01375 233 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 ANXA6P08133 673 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 SMIM10L1P0DMW3 83 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 UQCRBP14927 111 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 DDCP20711 480 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 MAGEA2P43356 314 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 RPS9P46781 194 aaKnown RBP8.48□□□□□ -1.05
TDP1-210ENST00000554976 TRA2BP62995 288 aaKnown RBP8.48□□□□□ -1.05
TDP1-210ENST00000554976 HBA1P69905 142 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 KLC1Q07866 573 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 GPR18Q14330 331 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 INTS11Q5TA45 600 aaKnown RBP8.48□□□□□ -1.05
TDP1-210ENST00000554976 ANXA8L1Q5VT79 327 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 ENPP6Q6UWR7 440 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 ARHGEF39Q8N4T4 335 aa8.48□□□□□ -1.05
TDP1-210ENST00000554976 FAM47BQ8NA70 645 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms