RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 CAPGP40121 348 aa16.67■□□□□ 0.26
SHOX-204ENST00000554971 HNMTP50135 292 aa16.67■□□□□ 0.26
SHOX-204ENST00000554971 MAZP56270 477 aaKnown RBP16.67■□□□□ 0.26
SHOX-204ENST00000554971 ESRRGP62508 458 aa16.67■□□□□ 0.26
SHOX-204ENST00000554971 GSTM4Q03013 218 aa16.67■□□□□ 0.26
SHOX-204ENST00000554971 ZNF33BQ06732 778 aa16.67■□□□□ 0.26
SHOX-204ENST00000554971 HSPA14Q0VDF9 509 aa16.67■□□□□ 0.26
SHOX-204ENST00000554971 GBX1Q14549 363 aa16.67■□□□□ 0.26
SHOX-204ENST00000554971 LRRC70Q7Z2Q7 622 aa16.67■□□□□ 0.26
SHOX-204ENST00000554971 PATL1Q86TB9 770 aaKnown RBP16.67■□□□□ 0.26
SHOX-204ENST00000554971 RDH12Q96NR8 316 aa16.67■□□□□ 0.26
SHOX-204ENST00000554971 SLAMF8Q9P0V8 285 aa16.67■□□□□ 0.26
SHOX-204ENST00000554971 POLR3HQ9Y535 204 aaPredicted RBP16.67■□□□□ 0.26
SHOX-204ENST00000554971 CFAP20Q9Y6A4 193 aaKnown RBP16.67■□□□□ 0.26
SHOX-204ENST00000554971 CEPT1Q9Y6K0 416 aa16.67■□□□□ 0.26
SHOX-204ENST00000554971 EME2A4GXA9 379 aaPredicted RBP16.66■□□□□ 0.26
SHOX-204ENST00000554971 MANBAO00462 879 aa16.66■□□□□ 0.26
SHOX-204ENST00000554971 CLOCKO15516 846 aa16.66■□□□□ 0.26
SHOX-204ENST00000554971 CLDN9O95484 217 aa16.66■□□□□ 0.26
SHOX-204ENST00000554971 GUCA1CO95843 209 aa16.66■□□□□ 0.26
SHOX-204ENST00000554971 MPC1LP0DKB6 136 aa16.66■□□□□ 0.26
SHOX-204ENST00000554971 MTHFD1P11586 935 aaKnown RBP16.66■□□□□ 0.26
SHOX-204ENST00000554971 PRPH2P23942 346 aa16.66■□□□□ 0.26
SHOX-204ENST00000554971 YBX1P67809 324 aaKnown RBP16.66■□□□□ 0.26
SHOX-204ENST00000554971 SP140Q13342 867 aa16.66■□□□□ 0.26
SHOX-204ENST00000554971 MAPKAPK3Q16644 382 aa16.66■□□□□ 0.26
SHOX-204ENST00000554971 PHKG1Q16816 387 aa16.66■□□□□ 0.26
SHOX-204ENST00000554971 RSPO4Q2I0M5 234 aaPredicted RBP16.66■□□□□ 0.26
SHOX-204ENST00000554971 C11orf91Q3C1V1 193 aa16.66■□□□□ 0.26
SHOX-204ENST00000554971 TTC33Q6PID6 262 aaPredicted RBP16.66■□□□□ 0.26
SHOX-204ENST00000554971 DEFB124Q8NES8 71 aa16.66■□□□□ 0.26
SHOX-204ENST00000554971 NMD3Q96D46 503 aaKnown RBP16.66■□□□□ 0.26
SHOX-204ENST00000554971 TMEM74Q96NL1 305 aa16.66■□□□□ 0.26
SHOX-204ENST00000554971 DPY30Q9C005 99 aa16.66■□□□□ 0.26
SHOX-204ENST00000554971 LRTM1Q9HBL6 345 aa16.66■□□□□ 0.26
SHOX-204ENST00000554971 C1orf109Q9NX04 203 aa16.66■□□□□ 0.26
SHOX-204ENST00000554971 ACSL5Q9ULC5 683 aa16.66■□□□□ 0.26
SHOX-204ENST00000554971 COL27A1Q8IZC6 1860 aaPredicted RBP16.66■□□□□ 0.26
SHOX-204ENST00000554971 SLCO2B1O94956 709 aa16.66■□□□□ 0.26
SHOX-204ENST00000554971 SCELO95171 688 aa16.66■□□□□ 0.26
SHOX-204ENST00000554971 PRPS2P11908 318 aa16.66■□□□□ 0.26
SHOX-204ENST00000554971 CDH2P19022 906 aaPredicted RBP16.66■□□□□ 0.26
SHOX-204ENST00000554971 SLC19A1P41440 591 aa16.66■□□□□ 0.26
SHOX-204ENST00000554971 CDK9P50750 372 aaKnown RBP16.66■□□□□ 0.26
SHOX-204ENST00000554971 OR4D2P58180 307 aa16.66■□□□□ 0.26
SHOX-204ENST00000554971 CHRNB3Q05901 458 aa16.66■□□□□ 0.26
SHOX-204ENST00000554971 IMPG1Q17R60 797 aa16.66■□□□□ 0.26
SHOX-204ENST00000554971 C18orf21Q32NC0 220 aaPredicted RBP16.66■□□□□ 0.26
SHOX-204ENST00000554971 C14orf28Q4W4Y0 310 aa16.66■□□□□ 0.26
SHOX-204ENST00000554971 DUS1LQ6P1R4 473 aaKnown RBP16.66■□□□□ 0.26
SHOX-204ENST00000554971 ARL14Q8N4G2 192 aa16.66■□□□□ 0.26
SHOX-204ENST00000554971 PNPT1Q8TCS8 783 aaKnown RBP16.66■□□□□ 0.26
SHOX-204ENST00000554971 ASZ1Q8WWH4 475 aa16.66■□□□□ 0.26
SHOX-204ENST00000554971 ZNF583Q96ND8 569 aa16.66■□□□□ 0.26
SHOX-204ENST00000554971 INSM2Q96T92 566 aaPredicted RBP16.66■□□□□ 0.26
SHOX-204ENST00000554971 SLC12A9Q9BXP2 914 aa16.66■□□□□ 0.26
SHOX-204ENST00000554971 CLMPQ9H6B4 373 aa16.66■□□□□ 0.26
SHOX-204ENST00000554971 TIMMDC1Q9NPL8 285 aa16.66■□□□□ 0.26
SHOX-204ENST00000554971 TOR4AQ9NXH8 423 aa16.66■□□□□ 0.26
SHOX-204ENST00000554971 RSL24D1Q9UHA3 163 aaKnown RBP16.66■□□□□ 0.26
SHOX-204ENST00000554971 TMED5Q9Y3A6 229 aa16.66■□□□□ 0.26
SHOX-204ENST00000554971 CCDC160A6NGH7 325 aa16.65■□□□□ 0.26
SHOX-204ENST00000554971 PPM1DO15297 605 aa16.65■□□□□ 0.26
SHOX-204ENST00000554971 ERN1O75460 977 aaKnown RBP16.65■□□□□ 0.26
SHOX-204ENST00000554971 HPRP00739 348 aa16.65■□□□□ 0.26
SHOX-204ENST00000554971 CKMT1AP12532 417 aa16.65■□□□□ 0.26
SHOX-204ENST00000554971 IL1RNP18510 177 aa16.65■□□□□ 0.26
SHOX-204ENST00000554971 ACADLP28330 430 aa16.65■□□□□ 0.26
SHOX-204ENST00000554971 MAPK1P28482 360 aa16.65■□□□□ 0.26
SHOX-204ENST00000554971 HOXD11P31277 338 aaPredicted RBP16.65■□□□□ 0.26
SHOX-204ENST00000554971 RPIAP49247 311 aa16.65■□□□□ 0.26
SHOX-204ENST00000554971 RPL38P63173 70 aaKnown RBP16.65■□□□□ 0.26
SHOX-204ENST00000554971 UBE2IP63279 158 aaKnown RBP16.65■□□□□ 0.26
SHOX-204ENST00000554971 EPS8Q12929 822 aa16.65■□□□□ 0.26
SHOX-204ENST00000554971 RPA4Q13156 261 aa16.65■□□□□ 0.26
SHOX-204ENST00000554971 INAVAQ3KP66 663 aa16.65■□□□□ 0.26
SHOX-204ENST00000554971 ATG9BQ674R7 924 aa16.65■□□□□ 0.26
SHOX-204ENST00000554971 GUSBP11Q6P575 273 aa16.65■□□□□ 0.26
SHOX-204ENST00000554971 MSANTD1Q6ZTZ1 278 aa16.65■□□□□ 0.26
SHOX-204ENST00000554971 NEK10Q6ZWH5 1172 aa16.65■□□□□ 0.26
SHOX-204ENST00000554971 SLC22A15Q8IZD6 547 aa16.65■□□□□ 0.26
SHOX-204ENST00000554971 DCBLD1Q8N8Z6 715 aa16.65■□□□□ 0.26
SHOX-204ENST00000554971 GTF2H4Q92759 462 aa16.65■□□□□ 0.26
SHOX-204ENST00000554971 TMEM159Q96B96 161 aa16.65■□□□□ 0.26
SHOX-204ENST00000554971 CNDP2Q96KP4 475 aaKnown RBP16.65■□□□□ 0.26
SHOX-204ENST00000554971 PARVBQ9HBI1 364 aa16.65■□□□□ 0.26
SHOX-204ENST00000554971 CDV3Q9UKY7 258 aaKnown RBP16.65■□□□□ 0.26
SHOX-204ENST00000554971 ZNF490Q9ULM2 529 aaPredicted RBP16.65■□□□□ 0.26
SHOX-204ENST00000554971 SNX6Q9UNH7 406 aa16.65■□□□□ 0.26
SHOX-204ENST00000554971 FAM149AA5PLN7 773 aa16.64■□□□□ 0.26
SHOX-204ENST00000554971 PDLIM1O00151 329 aa16.64■□□□□ 0.26
SHOX-204ENST00000554971 TPST1O60507 370 aa16.64■□□□□ 0.26
SHOX-204ENST00000554971 NCK1P16333 377 aa16.64■□□□□ 0.26
SHOX-204ENST00000554971 FASLGP48023 281 aa16.64■□□□□ 0.26
SHOX-204ENST00000554971 RPE65Q16518 533 aa16.64■□□□□ 0.26
SHOX-204ENST00000554971 PLEKHS1Q5SXH7 462 aa16.64■□□□□ 0.26
SHOX-204ENST00000554971 USP51Q70EK9 711 aa16.64■□□□□ 0.26
SHOX-204ENST00000554971 PDZD3Q86UT5 571 aa16.64■□□□□ 0.26
SHOX-204ENST00000554971 OR2T12Q8NG77 320 aa16.64■□□□□ 0.26
SHOX-204ENST00000554971 MPP4Q96JB8 637 aa16.64■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms