RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 IDSB3KWA1 339 aa11.67□□□□□ -0.54
SYNE2-214ENST00000554928 FAM227AF5H4B4 570 aa11.67□□□□□ -0.54
SYNE2-214ENST00000554928 G3V2L1 256 aa11.67□□□□□ -0.54
SYNE2-214ENST00000554928 SAP18O00422 153 aaKnown RBP11.67□□□□□ -0.54
SYNE2-214ENST00000554928 ERI3O43414 337 aaKnown RBP11.67□□□□□ -0.54
SYNE2-214ENST00000554928 CHST10O43529 356 aa11.67□□□□□ -0.54
SYNE2-214ENST00000554928 CDH16O75309 829 aa11.67□□□□□ -0.54
SYNE2-214ENST00000554928 CLEC3AO75596 197 aa11.67□□□□□ -0.54
SYNE2-214ENST00000554928 CDC123O75794 336 aaPredicted RBP11.67□□□□□ -0.54
SYNE2-214ENST00000554928 ETHE1O95571 254 aa11.67□□□□□ -0.54
SYNE2-214ENST00000554928 TGFB1P01137 390 aa11.67□□□□□ -0.54
SYNE2-214ENST00000554928 PROCP04070 461 aa11.67□□□□□ -0.54
SYNE2-214ENST00000554928 CCL11P51671 97 aa11.67□□□□□ -0.54
SYNE2-214ENST00000554928 NEK2P51955 445 aa11.67□□□□□ -0.54
SYNE2-214ENST00000554928 PLA2G16P53816 162 aa11.67□□□□□ -0.54
SYNE2-214ENST00000554928 EMP2P54851 167 aa11.67□□□□□ -0.54
SYNE2-214ENST00000554928 BTN3A2P78410 334 aa11.67□□□□□ -0.54
SYNE2-214ENST00000554928 EEF1A2Q05639 463 aaKnown RBP11.67□□□□□ -0.54
SYNE2-214ENST00000554928 SLC18A2Q05940 514 aa11.67□□□□□ -0.54
SYNE2-214ENST00000554928 KCNAB2Q13303 367 aa11.67□□□□□ -0.54
SYNE2-214ENST00000554928 DDX39BQ13838 428 aaKnown RBP11.67□□□□□ -0.54
SYNE2-214ENST00000554928 RUNX2Q13950 521 aa11.67□□□□□ -0.54
SYNE2-214ENST00000554928 HERC3Q15034 1050 aa11.67□□□□□ -0.54
SYNE2-214ENST00000554928 CPSF6Q16630 551 aaKnown RBP eCLIP11.67□□□□□ -0.54
SYNE2-214ENST00000554928 ADPRMQ3LIE5 342 aa11.67□□□□□ -0.54
SYNE2-214ENST00000554928 MED27Q6P2C8 311 aa11.67□□□□□ -0.54
SYNE2-214ENST00000554928 ZNF793Q6ZN11 406 aa11.67□□□□□ -0.54
SYNE2-214ENST00000554928 LANCL3Q6ZV70 420 aa11.67□□□□□ -0.54
SYNE2-214ENST00000554928 APLFQ8IW19 511 aaPredicted RBP11.67□□□□□ -0.54
SYNE2-214ENST00000554928 OR11G2Q8NGC1 345 aa11.67□□□□□ -0.54
SYNE2-214ENST00000554928 WBP1Q96G27 269 aa11.67□□□□□ -0.54
SYNE2-214ENST00000554928 ABHD17AQ96GS6 310 aa11.67□□□□□ -0.54
SYNE2-214ENST00000554928 MS4A8Q9BY19 250 aa11.67□□□□□ -0.54
SYNE2-214ENST00000554928 TGIF2Q9GZN2 237 aa11.67□□□□□ -0.54
SYNE2-214ENST00000554928 VN1R1Q9GZP7 353 aa11.67□□□□□ -0.54
SYNE2-214ENST00000554928 OR51B5Q9H339 312 aa11.67□□□□□ -0.54
SYNE2-214ENST00000554928 ACTR8Q9H981 624 aa11.67□□□□□ -0.54
SYNE2-214ENST00000554928 MKKSQ9NPJ1 570 aaPredicted RBP11.67□□□□□ -0.54
SYNE2-214ENST00000554928 ZNF71Q9NQZ8 489 aaPredicted RBP11.67□□□□□ -0.54
SYNE2-214ENST00000554928 LGALS13Q9UHV8 139 aa11.67□□□□□ -0.54
SYNE2-214ENST00000554928 TNPO3Q9Y5L0 923 aaKnown RBP11.67□□□□□ -0.54
SYNE2-214ENST00000554928 BOD1L1Q8NFC6 3051 aa11.67□□□□□ -0.54
SYNE2-214ENST00000554928 MED13Q9UHV7 2174 aa11.67□□□□□ -0.54
SYNE2-214ENST00000554928 IGHV3-20A0A0C4DH32 117 aa11.66□□□□□ -0.54
SYNE2-214ENST00000554928 ANKDD1BA6NHY2 528 aa11.66□□□□□ -0.54
SYNE2-214ENST00000554928 PRPF4O43172 522 aaKnown RBP eCLIP11.66□□□□□ -0.54
SYNE2-214ENST00000554928 PLIN3O60664 434 aa11.66□□□□□ -0.54
SYNE2-214ENST00000554928 GLRA3O75311 464 aa11.66□□□□□ -0.54
SYNE2-214ENST00000554928 CELA2AP08217 269 aa11.66□□□□□ -0.54
SYNE2-214ENST00000554928 GSTA1P08263 222 aa11.66□□□□□ -0.54
SYNE2-214ENST00000554928 KRT4P19013 534 aa11.66□□□□□ -0.54
SYNE2-214ENST00000554928 CERS1P27544 350 aa11.66□□□□□ -0.54
SYNE2-214ENST00000554928 HNRNPFP52597 415 aaKnown RBP11.66□□□□□ -0.54
SYNE2-214ENST00000554928 ZNF844Q08AG5 666 aa11.66□□□□□ -0.54
SYNE2-214ENST00000554928 IFFO1Q0D2I5 559 aa11.66□□□□□ -0.54
SYNE2-214ENST00000554928 Q0VFX4 171 aa11.66□□□□□ -0.54
SYNE2-214ENST00000554928 LAPTM5Q13571 262 aa11.66□□□□□ -0.54
SYNE2-214ENST00000554928 ZRSR2Q15696 482 aaKnown RBP11.66□□□□□ -0.54
SYNE2-214ENST00000554928 RBBP7Q16576 425 aa11.66□□□□□ -0.54
SYNE2-214ENST00000554928 PAGE2BQ5JRK9 111 aa11.66□□□□□ -0.54
SYNE2-214ENST00000554928 TCHHL1Q5QJ38 904 aaPredicted RBP11.66□□□□□ -0.54
SYNE2-214ENST00000554928 ZNF678Q5SXM1 525 aa11.66□□□□□ -0.54
SYNE2-214ENST00000554928 LETMD1Q6P1Q0 360 aa11.66□□□□□ -0.54
SYNE2-214ENST00000554928 ABHD17CQ6PCB6 329 aa11.66□□□□□ -0.54
SYNE2-214ENST00000554928 ABHD13Q7L211 337 aa11.66□□□□□ -0.54
SYNE2-214ENST00000554928 TRABD2AQ86V40 505 aa11.66□□□□□ -0.54
SYNE2-214ENST00000554928 CA13Q8N1Q1 262 aa11.66□□□□□ -0.54
SYNE2-214ENST00000554928 L3MBTL4Q8NA19 623 aa11.66□□□□□ -0.54
SYNE2-214ENST00000554928 TMEM52Q8NDY8 209 aa11.66□□□□□ -0.54
SYNE2-214ENST00000554928 OR4F6Q8NGB9 312 aa11.66□□□□□ -0.54
SYNE2-214ENST00000554928 HUS1BQ8NHY5 278 aa11.66□□□□□ -0.54
SYNE2-214ENST00000554928 TRPC4APQ8TEL6 797 aa11.66□□□□□ -0.54
SYNE2-214ENST00000554928 TSLPQ969D9 159 aa11.66□□□□□ -0.54
SYNE2-214ENST00000554928 GAL3ST3Q96A11 431 aa11.66□□□□□ -0.54
SYNE2-214ENST00000554928 MTFMTQ96DP5 389 aaKnown RBP11.66□□□□□ -0.54
SYNE2-214ENST00000554928 MTERF1Q99551 399 aaKnown RBP11.66□□□□□ -0.54
SYNE2-214ENST00000554928 C1QTNF3Q9BXJ4 246 aa11.66□□□□□ -0.54
SYNE2-214ENST00000554928 PITHD1Q9GZP4 211 aaPredicted RBP11.66□□□□□ -0.54
SYNE2-214ENST00000554928 REXO4Q9GZR2 422 aaKnown RBP11.66□□□□□ -0.54
SYNE2-214ENST00000554928 PPCSQ9HAB8 311 aa11.66□□□□□ -0.54
SYNE2-214ENST00000554928 DMRT3Q9NQL9 472 aa11.66□□□□□ -0.54
SYNE2-214ENST00000554928 SEMA3GQ9NS98 782 aa11.66□□□□□ -0.54
SYNE2-214ENST00000554928 C14orf105Q9NVL8 296 aa11.66□□□□□ -0.54
SYNE2-214ENST00000554928 NXT1Q9UKK6 140 aaKnown RBP11.66□□□□□ -0.54
SYNE2-214ENST00000554928 MKL2Q9ULH7 1088 aa11.66□□□□□ -0.54
SYNE2-214ENST00000554928 AGPSO00116 658 aa11.65□□□□□ -0.54
SYNE2-214ENST00000554928 B4GALT2O60909 372 aa11.65□□□□□ -0.54
SYNE2-214ENST00000554928 SPAG7O75391 227 aa11.65□□□□□ -0.54
SYNE2-214ENST00000554928 HEXBP07686 556 aa11.65□□□□□ -0.54
SYNE2-214ENST00000554928 CD63P08962 238 aa11.65□□□□□ -0.54
SYNE2-214ENST00000554928 COX6A1P12074 109 aa11.65□□□□□ -0.54
SYNE2-214ENST00000554928 ATP5F1P24539 256 aaPredicted RBP11.65□□□□□ -0.54
SYNE2-214ENST00000554928 CRHR1P34998 444 aa11.65□□□□□ -0.54
SYNE2-214ENST00000554928 PRKAA2P54646 552 aa11.65□□□□□ -0.54
SYNE2-214ENST00000554928 RPS13P62277 151 aaKnown RBP11.65□□□□□ -0.54
SYNE2-214ENST00000554928 HERVK_113P63132 956 aa11.65□□□□□ -0.54
SYNE2-214ENST00000554928 BTG2P78543 158 aa11.65□□□□□ -0.54
SYNE2-214ENST00000554928 RHAGQ02094 409 aa11.65□□□□□ -0.54
SYNE2-214ENST00000554928 HIST2H2ACQ16777 129 aaPredicted RBP11.65□□□□□ -0.54
SYNE2-214ENST00000554928 MINDY4Q4G0A6 757 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms