RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 OLAHQ9NV23 265 aa10.01□□□□□ -0.81
SHMT2-215ENST00000554656 C14orf105Q9NVL8 296 aa10.01□□□□□ -0.81
SHMT2-215ENST00000554656 SH2B3Q9UQQ2 575 aa10.01□□□□□ -0.81
SHMT2-215ENST00000554656 NCOA6Q14686 2063 aaPredicted RBP10.01□□□□□ -0.81
SHMT2-215ENST00000554656 TEP1Q99973 2627 aaKnown RBP10.01□□□□□ -0.81
SHMT2-215ENST00000554656 OTOGQ6ZRI0 2925 aa10□□□□□ -0.81
SHMT2-215ENST00000554656 PDZD2O15018 2839 aa10□□□□□ -0.81
SHMT2-215ENST00000554656 A0A096LPK6 155 aa10□□□□□ -0.81
SHMT2-215ENST00000554656 CCDC189A1A4V9 331 aa10□□□□□ -0.81
SHMT2-215ENST00000554656 GFYI3L273 518 aa10□□□□□ -0.81
SHMT2-215ENST00000554656 KLF11O14901 512 aa10□□□□□ -0.81
SHMT2-215ENST00000554656 PCDH17O14917 1159 aa10□□□□□ -0.81
SHMT2-215ENST00000554656 PLIN3O60664 434 aa10□□□□□ -0.81
SHMT2-215ENST00000554656 VPS26AO75436 327 aa10□□□□□ -0.81
SHMT2-215ENST00000554656 HAUS5O94927 633 aa10□□□□□ -0.81
SHMT2-215ENST00000554656 BMP10O95393 424 aa10□□□□□ -0.81
SHMT2-215ENST00000554656 FAM107AO95990 144 aa10□□□□□ -0.81
SHMT2-215ENST00000554656 HEXBP07686 556 aa10□□□□□ -0.81
SHMT2-215ENST00000554656 EZRP15311 586 aaKnown RBP10□□□□□ -0.81
SHMT2-215ENST00000554656 MST1P26927 711 aa10□□□□□ -0.81
SHMT2-215ENST00000554656 IMPA1P29218 277 aa10□□□□□ -0.81
SHMT2-215ENST00000554656 SKIV2L2P42285 1042 aaKnown RBP10□□□□□ -0.81
SHMT2-215ENST00000554656 ARG2P78540 354 aa10□□□□□ -0.81
SHMT2-215ENST00000554656 GARNL3Q5VVW2 1013 aa10□□□□□ -0.81
SHMT2-215ENST00000554656 LANCL3Q6ZV70 420 aa10□□□□□ -0.81
SHMT2-215ENST00000554656 NEK10Q6ZWH5 1172 aa10□□□□□ -0.81
SHMT2-215ENST00000554656 FJX1Q86VR8 437 aa10□□□□□ -0.81
SHMT2-215ENST00000554656 FBXO15Q8NCQ5 510 aaPredicted RBP10□□□□□ -0.81
SHMT2-215ENST00000554656 RDH11Q8TC12 318 aa10□□□□□ -0.81
SHMT2-215ENST00000554656 CD200R1Q8TD46 325 aa10□□□□□ -0.81
SHMT2-215ENST00000554656 MGARPQ8TDB4 240 aa10□□□□□ -0.81
SHMT2-215ENST00000554656 LRRC8CQ8TDW0 803 aa10□□□□□ -0.81
SHMT2-215ENST00000554656 NR4A3Q92570 626 aa10□□□□□ -0.81
SHMT2-215ENST00000554656 HAS2Q92819 552 aa10□□□□□ -0.81
SHMT2-215ENST00000554656 VPS50Q96JG6 964 aa10□□□□□ -0.81
SHMT2-215ENST00000554656 IMMP1LQ96LU5 166 aa10□□□□□ -0.81
SHMT2-215ENST00000554656 FAM111AQ96PZ2 611 aa10□□□□□ -0.81
SHMT2-215ENST00000554656 YIPF2Q9BWQ6 316 aa10□□□□□ -0.81
SHMT2-215ENST00000554656 VN1R1Q9GZP7 353 aa10□□□□□ -0.81
SHMT2-215ENST00000554656 DRC3Q9H069 523 aa10□□□□□ -0.81
SHMT2-215ENST00000554656 ZNF700Q9H0M5 742 aa10□□□□□ -0.81
SHMT2-215ENST00000554656 MKKSQ9NPJ1 570 aaPredicted RBP10□□□□□ -0.81
SHMT2-215ENST00000554656 ABCF3Q9NUQ8 709 aa10□□□□□ -0.81
SHMT2-215ENST00000554656 RIC8BQ9NVN3 520 aa10□□□□□ -0.81
SHMT2-215ENST00000554656 SLC17A7Q9P2U7 560 aa10□□□□□ -0.81
SHMT2-215ENST00000554656 CDC14AQ9UNH5 594 aa10□□□□□ -0.81
SHMT2-215ENST00000554656 ACOT9Q9Y305 439 aa10□□□□□ -0.81
SHMT2-215ENST00000554656 VWA7Q9Y334 891 aa10□□□□□ -0.81
SHMT2-215ENST00000554656 DCHS2Q6V1P9 2916 aa10□□□□□ -0.81
SHMT2-215ENST00000554656 CACNA1CQ13936 2221 aa9.99□□□□□ -0.81
SHMT2-215ENST00000554656 PKDREJQ9NTG1 2253 aa9.99□□□□□ -0.81
SHMT2-215ENST00000554656 TRAV17A0A0B4J275 112 aa9.99□□□□□ -0.81
SHMT2-215ENST00000554656 IGHV3-20A0A0C4DH32 117 aa9.99□□□□□ -0.81
SHMT2-215ENST00000554656 DYTNA2CJ06 578 aa9.99□□□□□ -0.81
SHMT2-215ENST00000554656 OR2W5A6NFC9 320 aa9.99□□□□□ -0.81
SHMT2-215ENST00000554656 E5RI56 91 aa9.99□□□□□ -0.81
SHMT2-215ENST00000554656 CCNDBP1O95273 360 aa9.99□□□□□ -0.81
SHMT2-215ENST00000554656 WDPCPO95876 746 aa9.99□□□□□ -0.81
SHMT2-215ENST00000554656 SLC35E2BP0CK96 405 aa9.99□□□□□ -0.81
SHMT2-215ENST00000554656 MPC1LP0DKB6 136 aa9.99□□□□□ -0.81
SHMT2-215ENST00000554656 FDXRP22570 491 aa9.99□□□□□ -0.81
SHMT2-215ENST00000554656 SERPINB4P48594 390 aa9.99□□□□□ -0.81
SHMT2-215ENST00000554656 PRKAA2P54646 552 aa9.99□□□□□ -0.81
SHMT2-215ENST00000554656 PER3P56645 1201 aa9.99□□□□□ -0.81
SHMT2-215ENST00000554656 TAS2R39P59534 338 aa9.99□□□□□ -0.81
SHMT2-215ENST00000554656 TIAL1Q01085 375 aaKnown RBP eCLIP9.99□□□□□ -0.81
SHMT2-215ENST00000554656 PMP22Q01453 160 aa9.99□□□□□ -0.81
SHMT2-215ENST00000554656 RELAQ04206 551 aa9.99□□□□□ -0.81
SHMT2-215ENST00000554656 HECTD2Q5U5R9 776 aa9.99□□□□□ -0.81
SHMT2-215ENST00000554656 MBOAT1Q6ZNC8 495 aa9.99□□□□□ -0.81
SHMT2-215ENST00000554656 RIPOR1Q6ZS17 1223 aa9.99□□□□□ -0.81
SHMT2-215ENST00000554656 PIWIL4Q7Z3Z4 852 aaKnown RBP9.99□□□□□ -0.81
SHMT2-215ENST00000554656 CMC1Q7Z7K0 106 aa9.99□□□□□ -0.81
SHMT2-215ENST00000554656 OR9A4Q8NGU2 314 aa9.99□□□□□ -0.81
SHMT2-215ENST00000554656 SREK1Q8WXA9 508 aaKnown RBP9.99□□□□□ -0.81
SHMT2-215ENST00000554656 KCNJ9Q92806 393 aa9.99□□□□□ -0.81
SHMT2-215ENST00000554656 MAGEB10Q96LZ2 347 aaPredicted RBP9.99□□□□□ -0.81
SHMT2-215ENST00000554656 CCDC138Q96M89 665 aa9.99□□□□□ -0.81
SHMT2-215ENST00000554656 CCT8L2Q96SF2 557 aa9.99□□□□□ -0.81
SHMT2-215ENST00000554656 GPR21Q99679 349 aa9.99□□□□□ -0.81
SHMT2-215ENST00000554656 MACROD1Q9BQ69 325 aa9.99□□□□□ -0.81
SHMT2-215ENST00000554656 AARSD1Q9BTE6 412 aaKnown RBP9.99□□□□□ -0.81
SHMT2-215ENST00000554656 CCDC68Q9H2F9 335 aa9.99□□□□□ -0.81
SHMT2-215ENST00000554656 KLHL42Q9P2K6 505 aa9.99□□□□□ -0.81
SHMT2-215ENST00000554656 MKL2Q9ULH7 1088 aa9.99□□□□□ -0.81
SHMT2-215ENST00000554656 DHRS7Q9Y394 339 aa9.99□□□□□ -0.81
SHMT2-215ENST00000554656 ARHGAP10A1A4S6 786 aa9.98□□□□□ -0.81
SHMT2-215ENST00000554656 H7BY64 318 aa9.98□□□□□ -0.81
SHMT2-215ENST00000554656 SEC24DO94855 1032 aaPredicted RBP9.98□□□□□ -0.81
SHMT2-215ENST00000554656 KLHL2O95198 593 aa9.98□□□□□ -0.81
SHMT2-215ENST00000554656 WISP3O95389 354 aaPredicted RBP9.98□□□□□ -0.81
SHMT2-215ENST00000554656 PROCP04070 461 aa9.98□□□□□ -0.81
SHMT2-215ENST00000554656 BPGMP07738 259 aa9.98□□□□□ -0.81
SHMT2-215ENST00000554656 ANXA5P08758 320 aa9.98□□□□□ -0.81
SHMT2-215ENST00000554656 TAC1P20366 129 aa9.98□□□□□ -0.81
SHMT2-215ENST00000554656 DRD4P21917 467 aa9.98□□□□□ -0.81
SHMT2-215ENST00000554656 CXCR2P25025 360 aa9.98□□□□□ -0.81
SHMT2-215ENST00000554656 GRNP28799 593 aaKnown RBP9.98□□□□□ -0.81
SHMT2-215ENST00000554656 HSD17B2P37059 387 aa9.98□□□□□ -0.81
SHMT2-215ENST00000554656 ST13P50502 369 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms